Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00151 ATGAAGAAGGATAGCTCCATGAATCCTAACTTAACGCTTCTTCTACCTCCGCCCGACGAAGTTTCCTTTGCGTTCATAACCCGGAGCGGTACTTTCACCGATGGCGATTTGCTTGTTAATAGGGACGGCGTGCGGATTGTTTCTCAGACAGACGACGAAAGTCCTCCACCAATAAAGCCCTCAGACAACCATTTGTCTTTAGCAGATATAGACTCGATAAAAGTCATCGGAAAAGGAAATGGTGGAGTTGTTCAATTAGTCCGACATAAATGGACGAGCCAGTTTTTTGCTCTAAAGGTGATTCAGATGAATGCCGAGGAATCTTATTGTAGGCTCGTTGCTAAGGAACTAAAAATTAATCAGTTGACACAAAACCCTTTTATCGTTGTCTGTTACCAGATCTTCTATGACAATGGTGCCATTTTCATAATCTTGGAATACATGGATGGCGGATCGCTTGCAGATCTTCTAAAAAAAGTTGAAACAATCCTAGAACCTTATCTTGCAGCCATTTGTTACCAGGTATTAAAGGGGTTAATATACCTTCACCATGAAAAACATGTCATCCATAGAGACCTTAAGCCTTCAAATTTGTTGATAAATCATAGAGGGGAAGTTAAGATTACTGACTTTGGTGTTAGCGCTATACTGGCGAGTACGGCTGATCAAGCAAATTCTTTCGTTGGCACGTATGCTTACATGTCTCCGGAGAGACTCAATGGGGACAAATATGACAACAAAAGTGACATATGGAGTTTGGGTTTGGTTTTGCTAGAATGTGCTACGGGTCAATTTCCATATGCTCCACCGGATAAGGATAAAGGATGGGAAGGTTTTTTTGATGTTATGGTAGCTGTAGTAGAACTAGCATCACCTTCTGCGCCCGAACAATTTTCTCCAGAGTTTTGCTCTTTCATTTCTTCATGGTATACAAGCTTTTGTGTTTGTGAATCATATGAAATTGTCTCTGCTGTTTCTAGACCAAAAGATTTCCTTACAGAAAGACCCTCAGAAGAGAAGCTCTGCTCGCGAACTTCTGGTACATCCTTTCATCAAAAAGTTCGAACACTTGGACGTAGATCTCGCAGCTTACTTCAAGGATGCTGGCTCTCCATTAGCAACCTTCTAATTTTTATTTGGTACCTTGTGATCTCTCGTTGA 1161 41.26 MKKDSSMNPNLTLLLPPPDEVSFAFITRSGTFTDGDLLVNRDGVRIVSQTDDESPPPIKPSDNHLSLADIDSIKVIGKGNGGVVQLVRHKWTSQFFALKVIQMNAEESYCRLVAKELKINQLTQNPFIVVCYQIFYDNGAIFIILEYMDGGSLADLLKKVETILEPYLAAICYQVLKGLIYLHHEKHVIHRDLKPSNLLINHRGEVKITDFGVSAILASTADQANSFVGTYAYMSPERLNGDKYDNKSDIWSLGLVLLECATGQFPYAPPDKDKGWEGFFDVMVAVVELASPSAPEQFSPEFCSFISSWYTSFCVCESYEIVSAVSRPKDFLTERPSEEKLCSRTSGTSFHQKVRTLGRRSRSLLQGCWLSISNLLIFIWYLVISR 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1802433 1805342 + ClCG11G001650.1 Cla11g00151 283973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00151 386 Gene3D Phosphorylase Kinase; domain 1 49 149 - -
Cla11g00151 386 Gene3D Transferase(Phosphotransferase) domain 1 150 312 - -
Cla11g00151 386 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 5 308 - -
Cla11g00151 386 SUPERFAMILY Protein kinase-like (PK-like) 56 308 IPR011009 -
Cla11g00151 386 CDD PKc_MAPKK_plant_like 68 307 - -
Cla11g00151 386 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Cla11g00151 386 ProSiteProfiles Protein kinase domain profile. 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00151 386 PANTHER MAP KINASE KINASE 5 308 - -
Cla11g00151 386 Pfam Protein kinase domain 72 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00151 386 SMART serkin_6 70 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00151 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla03g01476 Cla11g00151 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01350 Cla-Chr7:30670398 Cla11g00151 Cla-Chr11:1802433 3.63E-56 dispersed
Cla11g00151 Cla-Chr11:1802433 Cla11g00183 Cla-Chr11:2179226 4.74E-119 dispersed
Cla11g00151 Cla-Chr11:1802433 Cla03g01476 Cla-Chr3:30269699 1.41E-168 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80910 PF00069 Pkinase 1.80E-60 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00151 K20603 - csv:101206374 588.186