Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla11g00152 | ATGACATCCGTGGCGGTTGCCGTTAACGGCGTCCGCGGCGGCAAAGGCGGCGGAGCAAGCCGCCGCGCTGTCAGATGGGCCGTCGAGAATCTCTTGCCGACCGCCGATCGCTTCATTTTGGTTCACGTTATGCCCAAAATCACCTCCATCCCCACCCCAATGGGGGATCTTGTTGCTGTCTCTGAACTTGATGCAGATGTGGTAGCTCTTTATGTTCATGATATGAAAAAGAAATATGAACAAGTTTTTGTACCTTTTAAGAAGTTATGTAGAAGAGAAAAGTTTCTTCTTCTGGTAGAAACTTTGATTTTGGAGGATGACAATCCTGCCACTGCACTTTTGAGATATGCATCTCAATCTGGGATTAAATGCTTGGTTTTGGGTTCTTGTTTTAGAACTTGCATAGCAAGGAAGATAAAAGGGGATTCAGTACCCTCTGCTATTATGAGAACTGCTAGTTCTTTTGATATTTATGTTATATATAAGAGGAGAGTTATCACACGAACCGCTAGTACTGCTCCATCTAGTGAAACTGACTCGAGGCAGTGGATGCTTGGTGACACTGATTATTACAGGGGTTTCAGTGCTGTTAGTGAAAAATTATCAGGAACTTCCTCTCCTTCTTCCTTGTCGATTGGACATCGAAGGGGTGATAGCCTCGAAGTTAACTCTACTGAGCAACTGAACTCTTTAAGCACTCTGACTGAGGAGGTGGGATTTTGTCGATATTTCGTGGTGATGCGACGGCGAGTCTTAAATGAAGGTCCTGCATTGCAGGAAGATATGCGGGCTGAAGTTGAATCTCTGCAGCTAGAACTAGAGACCACTGTTTCCTTGTACAATCAAGCTTGTGAAGAACTAGTACATGCTCAGAAGAAGGTTCAGTCACTTACATCAGAATGCCTTGAAGAATCAAGAAAAGTGAATGCTGCTTTGGAAAGGGAACAATCTTTGAGGAAAGTTGCTGCTAAAGAGAAAGCAAAGCATTTGGAAGCCATTAAAGAGCTTGAGGAGGCTAAAGACTTGCTGGCTAAAGAAGCTTATGAGAGGCAGCTGGCTGAGCTTAATGCCATAAAGGAGTCCGTGGAGAAGCAGAAAATTCTTGATACTCTTCTGACTAATGATAGGAGGTACAGAAGATATACCACTGCCGAAATAGAAGCTGCAACAAATTTCTTCGACGAAGTTAATGTGATTGGCATCGGAGGATATGGGAAAGTCTACAAATGCAGTCTCGATCATACACCTGTAGCCATTAAGGTTTTTCAACACGACATATTCGAGAAAAAAGATGAGTTTCTGAAAGAGGTTGAAATTCTAAGTCAGATACGACATCTGCACGTGGTTTTACTGCTTGGAGCTTGTCCCGAGCGAGGTTGTTTGATCTATGAATACATGGAAAATGGAAGCTTAGATGATCATATCTTGCTCCGGAAAGGAAAAGCTCCCCTCCCTTGGTCTATTAGATTTAGAATAGTTTTTCAAGTAGCTTCTGGCCTTGCATTTTTACACAATTCAAAGCCAGAGCCTATCATTCATAGAGATCTCAAACCGGGTAATATCTTACTGGACAGAAACTTTGTAAGTAAAATCTCAGATGTTGGAATGGCTAAGATCATCGGCGATATTGTGCCGGACAATGTCACGGAGTACCGAAACACCATTCTTGCCGGTACTCTACATTACATGGATCCTGAATATCAGAGAACTGGCACACTCCGGCCAAAGTCAGATACGTACGCACTTGGGGTAACAATTCTGCAGTTGTTGACCGGGCGAGAACCACACGGTCTTCTTCTGGCTATTGAAAACTCCATCGCAAGCGCGTCCCTTGCAGATATTCTAGACAAGTCAATAACTGACTGGCCTCTGGCTGAAGCTGAAGAGTTAGCTCAACTCGCACTCAAGTGCTTGAAACTTAGATGCAGGGATAGGCCAGATCTTGAATCTGAAGTTCTTCCAGTCCTTAAAAGGCTTGTTGATTTTGCAGATTCTTGTCAAAATGAAGGCAAAAATCCTGCTAATCCCCCAAGCCACTACTTCTGCCCAATCCTACAGGAAATCATGGAGGACCCTTATATAGCAGCCGATGGCTTTACTTATGAGTATGTAGCCATTAAAGCATGGCTCGAGAAATACGACGTATCGCCGGTGACAAAGCTTAAGCTTCAGCATTCTATTTTTATTCCAAACCACACTCTGCTCTCTGCCATACTAGAGTGGAAGTCAAGAGTGACATTTCCATCTTCCTAA | 2253 | 43.59 | MTSVAVAVNGVRGGKGGGASRRAVRWAVENLLPTADRFILVHVMPKITSIPTPMGDLVAVSELDADVVALYVHDMKKKYEQVFVPFKKLCRREKFLLLVETLILEDDNPATALLRYASQSGIKCLVLGSCFRTCIARKIKGDSVPSAIMRTASSFDIYVIYKRRVITRTASTAPSSETDSRQWMLGDTDYYRGFSAVSEKLSGTSSPSSLSIGHRRGDSLEVNSTEQLNSLSTLTEEVGFCRYFVVMRRRVLNEGPALQEDMRAEVESLQLELETTVSLYNQACEELVHAQKKVQSLTSECLEESRKVNAALEREQSLRKVAAKEKAKHLEAIKELEEAKDLLAKEAYERQLAELNAIKESVEKQKILDTLLTNDRRYRRYTTAEIEAATNFFDEVNVIGIGGYGKVYKCSLDHTPVAIKVFQHDIFEKKDEFLKEVEILSQIRHLHVVLLLGACPERGCLIYEYMENGSLDDHILLRKGKAPLPWSIRFRIVFQVASGLAFLHNSKPEPIIHRDLKPGNILLDRNFVSKISDVGMAKIIGDIVPDNVTEYRNTILAGTLHYMDPEYQRTGTLRPKSDTYALGVTILQLLTGREPHGLLLAIENSIASASLADILDKSITDWPLAEAEELAQLALKCLKLRCRDRPDLESEVLPVLKRLVDFADSCQNEGKNPANPPSHYFCPILQEIMEDPYIAADGFTYEYVAIKAWLEKYDVSPVTKLKLQHSIFIPNHTLLSAILEWKSRVTFPSS | 750 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 1806239 | 1811966 | - | ClCG11G001660.1 | Cla11g00152 | 283974 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla11g00152 | 750 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 16 | 142 | - | - | |
| Cla11g00152 | 750 | SUPERFAMILY | RING/U-box | 667 | 744 | - | - | |
| Cla11g00152 | 750 | PANTHER | U-BOX DOMAIN-CONTAINING PROTEIN 34 | 2 | 744 | - | - | |
| Cla11g00152 | 750 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 675 | 746 | IPR013083 | - | |
| Cla11g00152 | 750 | ProSiteProfiles | Protein kinase domain profile. | 393 | 656 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Cla11g00152 | 750 | CDD | RING-Ubox_WDSUB1_like | 680 | 720 | - | - | |
| Cla11g00152 | 750 | ProSiteProfiles | U-box domain profile. | 675 | 748 | IPR003613 | GO:0004842|GO:0016567 | |
| Cla11g00152 | 750 | SMART | Ubox_2 | 679 | 741 | IPR003613 | GO:0004842|GO:0016567 | |
| Cla11g00152 | 750 | PANTHER | OS02G0152300 PROTEIN | 2 | 744 | - | - | |
| Cla11g00152 | 750 | Coils | Coil | 319 | 365 | - | - | |
| Cla11g00152 | 750 | Pfam | U-box domain | 677 | 742 | IPR003613 | GO:0004842|GO:0016567 | |
| Cla11g00152 | 750 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 511 | 523 | IPR008271 | GO:0004672|GO:0006468 | |
| Cla11g00152 | 750 | CDD | STK_N | 3 | 162 | - | - | |
| Cla11g00152 | 750 | Gene3D | Transferase(Phosphotransferase) domain 1 | 466 | 673 | - | - | |
| Cla11g00152 | 750 | Pfam | Protein kinase domain | 394 | 649 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Cla11g00152 | 750 | Pfam | Universal stress protein family | 18 | 151 | IPR006016 | - | |
| Cla11g00152 | 750 | SUPERFAMILY | Protein kinase-like (PK-like) | 376 | 649 | IPR011009 | - | |
| Cla11g00152 | 750 | SMART | serkin_6 | 393 | 656 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Cla11g00152 | 750 | Coils | Coil | 280 | 300 | - | - | |
| Cla11g00152 | 750 | ProSitePatterns | Protein kinases ATP-binding region signature. | 399 | 420 | IPR017441 | GO:0005524 | |
| Cla11g00152 | 750 | Gene3D | Phosphorylase Kinase; domain 1 | 372 | 465 | - | - | |
| Cla11g00152 | 750 | Gene3D | HUPs | 2 | 160 | IPR014729 | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla11g00152 | - | - | - | cpep:111805862 | 1207.2 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla01g00450 | Cla-Chr1:4878826 | Cla11g00152 | Cla-Chr11:1806239 | 2.18E-09 | dispersed | |
| Cla01g00454 | Cla-Chr1:4918871 | Cla11g00152 | Cla-Chr11:1806239 | 5.12E-144 | dispersed | |
| Cla05g00164 | Cla-Chr5:1511538 | Cla11g00152 | Cla-Chr11:1806239 | 4.65E-107 | dispersed | |
| Cla06g00344 | Cla-Chr6:4371393 | Cla11g00152 | Cla-Chr11:1806239 | 7.02E-74 | dispersed | |
| Cla06g01694 | Cla-Chr6:30548137 | Cla11g00152 | Cla-Chr11:1806239 | 1.12E-07 | dispersed | |
| Cla11g00152 | Cla-Chr11:1806239 | Cla11g01104 | Cla-Chr11:22448886 | 1.02E-10 | dispersed | |
| Cla11g00152 | Cla-Chr11:1806239 | Cla09g00073 | Cla-Chr9:688045 | 6.65E-134 | wgd |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi11g145 | . | Blo16g00977 | Bda01g01340 | Bda11g01037 | . | . | . | . | . | . | Cma05g01403 | Cma12g00651 | Car05g01319 | Car12g00600 | . | . | . | . | . | . | . | . | . | . | Cla11g00152 | . | . | . | . | . | . | . | . | . | . | . | Csa02g00037 | Chy05g01451 | . | . | . | . | . | . | Bpe13g01247 | . | Bma06g00882 | . | Cmo05g01403 | Cmo12g00590 | . | . | . | . | Cpe11g01178 | . | Bhi06g01630 | . | . | . | . | . | . | . | . | . | . | . | . | . | Lsi11g00178 | . | . | Cme05g02054 |
Syn-Families
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Cla10g01473 | . | 1 | 1041 | U-box Gene Family | AT5G15400 | 76.0 | 0.0e+00 | 1577.0 | |
| Cla02g01224 | . | 213 | 810 | U-box Gene Family | AT2G23140 | 65.2 | 9.6e-120 | 427.9 | |
| Cla08g01687 | . | 1 | 818 | U-box Gene Family | AT1G24330 | 56.7 | 1.8e-237 | 819.3 | |
| Cla11g01354 | . | 209 | 1001 | U-box Gene Family | AT1G24330 | 54.3 | 1.3e-216 | 750.0 | |
| Cla08g01687 | . | 1 | 817 | U-box Gene Family | AT1G67530 | 56.6 | 2.2e-235 | 812.4 | |
| Cla11g01354 | . | 209 | 1002 | U-box Gene Family | AT1G67530 | 53.2 | 3.4e-212 | 735.3 | |
| Cla01g02188 | . | 1 | 362 | U-box Gene Family | AT4G21350 | 62.1 | 2.5e-120 | 429.1 | |
| Cla07g00206 | . | 135 | 460 | U-box Gene Family | AT3G07360 | 55.3 | 4.0e-82 | 302.0 | |
| Cla07g00605 | CCT | 312 | 499 | U-box Gene Family | AT1G71020 | 70.9 | 8.6e-73 | 271.6 | |
| Cla01g00596 | CCT | 1056 | 1255 | U-box Gene Family | AT1G71020 | 55.9 | 3.1e-54 | 209.9 | |
| Cla03g00152 | CCT | 263 | 432 | U-box Gene Family | AT1G71020 | 57.8 | 9.6e-48 | 188.3 | |
| Cla05g02163 | . | 279 | 444 | U-box Gene Family | AT1G71020 | 57.4 | 6.2e-47 | 185.7 | |
| Cla02g01975 | CCT | 255 | 425 | U-box Gene Family | AT1G71020 | 57.6 | 1.1e-46 | 184.9 | |
| Cla07g00605 | CCT | 63 | 703 | U-box Gene Family | AT1G23030 | 56.6 | 6.6e-110 | 395.2 | |
| Cla01g00596 | CCT | 881 | 1445 | U-box Gene Family | AT1G23030 | 53.3 | 2.1e-79 | 293.9 | |
| Cla02g01975 | CCT | 93 | 635 | U-box Gene Family | AT2G28830 | 50.8 | 1.3e-99 | 360.9 | |
| Cla03g00152 | CCT | 93 | 637 | U-box Gene Family | AT2G28830 | 58.3 | 1.6e-97 | 354.0 | |
| Cla03g00152 | CCT | 1 | 671 | U-box Gene Family | AT3G46510 | 66.6 | 5.0e-164 | 575.1 | |
| Cla02g01975 | CCT | 3 | 638 | U-box Gene Family | AT3G46510 | 66.3 | 5.9e-157 | 551.6 | |
| Cla05g02163 | . | 16 | 653 | U-box Gene Family | AT3G46510 | 56.1 | 1.0e-116 | 417.9 | |
| Cla05g02163 | . | 12 | 655 | U-box Gene Family | AT3G54850 | 65.6 | 3.6e-159 | 558.9 | |
| Cla02g01975 | CCT | 13 | 628 | U-box Gene Family | AT3G54850 | 57.3 | 2.4e-115 | 413.3 | |
| Cla03g00152 | CCT | 8 | 632 | U-box Gene Family | AT3G54850 | 55.0 | 1.7e-100 | 364.0 | |
| Cla02g00969 | . | 92 | 684 | U-box Gene Family | AT5G42340 | 60.0 | 2.1e-122 | 436.8 | |
| Cla04g00653 | . | 9 | 669 | U-box Gene Family | AT5G01830 | 57.4 | 1.4e-198 | 689.9 | |
| Cla03g00696 | . | 1 | 711 | U-box Gene Family | AT1G29340 | 68.1 | 3.4e-246 | 848.2 | |
| Cla05g01204 | . | 27 | 442 | U-box Gene Family | AT5G37490 | 51.7 | 1.2e-110 | 397.1 | |
| Cla04g00523 | . | 4 | 422 | U-box Gene Family | AT3G52450 | 52.4 | 3.2e-119 | 425.6 | |
| Cla10g01740 | . | 1 | 403 | U-box Gene Family | AT3G52450 | 50.7 | 2.4e-114 | 409.5 | |
| Cla10g01740 | . | 1 | 403 | U-box Gene Family | AT2G35930 | 55.6 | 4.7e-120 | 428.3 | |
| Cla04g00523 | . | 7 | 422 | U-box Gene Family | AT2G35930 | 51.4 | 3.7e-117 | 418.7 | |
| Cla05g01082 | . | 9 | 426 | U-box Gene Family | AT3G19380 | 64.1 | 3.6e-147 | 518.5 | |
| Cla05g01082 | . | 1 | 426 | U-box Gene Family | AT1G49780 | 64.3 | 1.1e-151 | 533.5 | |
| Cla01g01528 | CCT | 1 | 407 | U-box Gene Family | AT5G64660 | 54.2 | 2.6e-121 | 432.6 | |
| Cla01g01528 | CCT | 1 | 407 | U-box Gene Family | AT5G09800 | 51.3 | 6.6e-106 | 381.3 | |
| Cla05g02664 | . | 1 | 454 | U-box Gene Family | AT3G49810 | 62.6 | 2.1e-153 | 539.3 | |
| Cla08g01635 | . | 1 | 454 | U-box Gene Family | AT3G49810 | 61.9 | 9.6e-151 | 530.4 | |
| Cla08g01635 | . | 1 | 454 | U-box Gene Family | AT5G65920 | 62.8 | 4.7e-150 | 528.1 | |
| Cla05g02664 | . | 1 | 454 | U-box Gene Family | AT5G65920 | 61.3 | 2.9e-147 | 518.8 | |
| Cla05g00164 | CCT | 1 | 918 | U-box Gene Family | AT2G45910 | 50.3 | 8.7e-230 | 793.9 | |
| Cla11g00152 | . | 4 | 747 | U-box Gene Family | AT2G19410 | 50.6 | 6.7e-208 | 721.1 | |
| Cla01g00454 | . | 48 | 843 | U-box Gene Family | AT4G25160 | 50.7 | 1.0e-217 | 753.8 | |
| Cla06g01636 | . | 1 | 478 | U-box Gene Family | AT5G65200 | 50.1 | 2.9e-88 | 323.2 | |
| Cla09g01823 | . | 1 | 551 | U-box Gene Family | AT5G40140 | 53.9 | 1.6e-94 | 344.0 | |
| Cla06g01636 | . | 27 | 477 | U-box Gene Family | AT5G40140 | 51.5 | 2.1e-59 | 227.3 | |
| Cla01g01396 | . | 29 | 498 | U-box Gene Family | AT5G40140 | 52.1 | 2.9e-56 | 216.9 | |
| Cla08g00936 | . | 77 | 885 | U-box Gene Family | AT1G76390 | 61.2 | 4.1e-269 | 924.5 | |
| Cla08g00936 | . | 86 | 885 | U-box Gene Family | AT1G20780 | 61.7 | 4.8e-278 | 954.1 | |
| Cla08g01687 | . | 1 | 820 | U-box Gene Family | AT1G27910 | 59.6 | 1.4e-261 | 899.4 | |
| Cla11g01354 | . | 209 | 1013 | U-box Gene Family | AT1G27910 | 57.8 | 1.1e-247 | 853.2 | |
| Cla01g01716 | . | 394 | 985 | U-box Gene Family | AT5G67530 | 74.0 | 3.4e-260 | 894.4 | |
| Cla05g00226 | . | 77 | 207 | U-box Gene Family | AT5G67530 | 55.7 | 5.9e-39 | 159.5 | |
| Cla10g01783 | . | 12 | 150 | U-box Gene Family | AT5G67530 | 50.4 | 1.1e-37 | 155.2 | |
| Cla05g00413 | . | 48 | 530 | U-box Gene Family | AT1G04510 | 70.6 | 3.1e-193 | 671.8 | |
| Cla05g00413 | . | 48 | 504 | U-box Gene Family | AT2G33340 | 72.5 | 8.4e-193 | 670.2 | |
| Cla07g00205 | . | 10 | 278 | U-box Gene Family | AT3G07370 | 66.9 | 3.0e-102 | 368.6 | |
| Cla10g01473 | . | 1 | 1041 | U-box Gene Family | AT5G15400 | 76.0 | 0.0e+00 | 1577.0 | |
| Cla02g01224 | . | 213 | 810 | U-box Gene Family | AT2G23140 | 65.2 | 9.6e-120 | 427.9 | |
| Cla08g01687 | . | 1 | 818 | U-box Gene Family | AT1G24330 | 56.7 | 1.8e-237 | 819.3 | |
| Cla11g01354 | . | 209 | 1001 | U-box Gene Family | AT1G24330 | 54.3 | 1.3e-216 | 750.0 | |
| Cla08g01687 | . | 1 | 817 | U-box Gene Family | AT1G67530 | 56.6 | 2.2e-235 | 812.4 | |
| Cla11g01354 | . | 209 | 1002 | U-box Gene Family | AT1G67530 | 53.2 | 3.4e-212 | 735.3 | |
| Cla01g02188 | . | 1 | 362 | U-box Gene Family | AT4G21350 | 62.1 | 2.5e-120 | 429.1 | |
| Cla07g00206 | . | 135 | 460 | U-box Gene Family | AT3G07360 | 55.3 | 4.0e-82 | 302.0 | |
| Cla07g00605 | CCT | 312 | 499 | U-box Gene Family | AT1G71020 | 70.9 | 8.6e-73 | 271.6 | |
| Cla01g00596 | CCT | 1056 | 1255 | U-box Gene Family | AT1G71020 | 55.9 | 3.1e-54 | 209.9 | |
| Cla03g00152 | CCT | 263 | 432 | U-box Gene Family | AT1G71020 | 57.8 | 9.6e-48 | 188.3 | |
| Cla05g02163 | . | 279 | 444 | U-box Gene Family | AT1G71020 | 57.4 | 6.2e-47 | 185.7 | |
| Cla02g01975 | CCT | 255 | 425 | U-box Gene Family | AT1G71020 | 57.6 | 1.1e-46 | 184.9 | |
| Cla07g00605 | CCT | 63 | 703 | U-box Gene Family | AT1G23030 | 56.6 | 6.6e-110 | 395.2 | |
| Cla01g00596 | CCT | 881 | 1445 | U-box Gene Family | AT1G23030 | 53.3 | 2.1e-79 | 293.9 | |
| Cla02g01975 | CCT | 93 | 635 | U-box Gene Family | AT2G28830 | 50.8 | 1.3e-99 | 360.9 | |
| Cla03g00152 | CCT | 93 | 637 | U-box Gene Family | AT2G28830 | 58.3 | 1.6e-97 | 354.0 | |
| Cla03g00152 | CCT | 1 | 671 | U-box Gene Family | AT3G46510 | 66.6 | 5.0e-164 | 575.1 | |
| Cla02g01975 | CCT | 3 | 638 | U-box Gene Family | AT3G46510 | 66.3 | 5.9e-157 | 551.6 | |
| Cla05g02163 | . | 16 | 653 | U-box Gene Family | AT3G46510 | 56.1 | 1.0e-116 | 417.9 | |
| Cla05g02163 | . | 12 | 655 | U-box Gene Family | AT3G54850 | 65.6 | 3.6e-159 | 558.9 | |
| Cla02g01975 | CCT | 13 | 628 | U-box Gene Family | AT3G54850 | 57.3 | 2.4e-115 | 413.3 | |
| Cla03g00152 | CCT | 8 | 632 | U-box Gene Family | AT3G54850 | 55.0 | 1.7e-100 | 364.0 | |
| Cla02g00969 | . | 92 | 684 | U-box Gene Family | AT5G42340 | 60.0 | 2.1e-122 | 436.8 | |
| Cla04g00653 | . | 9 | 669 | U-box Gene Family | AT5G01830 | 57.4 | 1.4e-198 | 689.9 | |
| Cla03g00696 | . | 1 | 711 | U-box Gene Family | AT1G29340 | 68.1 | 3.4e-246 | 848.2 | |
| Cla05g01204 | . | 27 | 442 | U-box Gene Family | AT5G37490 | 51.7 | 1.2e-110 | 397.1 | |
| Cla04g00523 | . | 4 | 422 | U-box Gene Family | AT3G52450 | 52.4 | 3.2e-119 | 425.6 | |
| Cla10g01740 | . | 1 | 403 | U-box Gene Family | AT3G52450 | 50.7 | 2.4e-114 | 409.5 | |
| Cla10g01740 | . | 1 | 403 | U-box Gene Family | AT2G35930 | 55.6 | 4.7e-120 | 428.3 | |
| Cla04g00523 | . | 7 | 422 | U-box Gene Family | AT2G35930 | 51.4 | 3.7e-117 | 418.7 | |
| Cla05g01082 | . | 9 | 426 | U-box Gene Family | AT3G19380 | 64.1 | 3.6e-147 | 518.5 | |
| Cla05g01082 | . | 1 | 426 | U-box Gene Family | AT1G49780 | 64.3 | 1.1e-151 | 533.5 | |
| Cla01g01528 | CCT | 1 | 407 | U-box Gene Family | AT5G64660 | 54.2 | 2.6e-121 | 432.6 | |
| Cla01g01528 | CCT | 1 | 407 | U-box Gene Family | AT5G09800 | 51.3 | 6.6e-106 | 381.3 | |
| Cla05g02664 | . | 1 | 454 | U-box Gene Family | AT3G49810 | 62.6 | 2.1e-153 | 539.3 | |
| Cla08g01635 | . | 1 | 454 | U-box Gene Family | AT3G49810 | 61.9 | 9.6e-151 | 530.4 | |
| Cla08g01635 | . | 1 | 454 | U-box Gene Family | AT5G65920 | 62.8 | 4.7e-150 | 528.1 | |
| Cla05g02664 | . | 1 | 454 | U-box Gene Family | AT5G65920 | 61.3 | 2.9e-147 | 518.8 | |
| Cla05g00164 | CCT | 1 | 918 | U-box Gene Family | AT2G45910 | 50.3 | 8.7e-230 | 793.9 | |
| Cla11g00152 | . | 4 | 747 | U-box Gene Family | AT2G19410 | 50.6 | 6.7e-208 | 721.1 | |
| Cla01g00454 | . | 48 | 843 | U-box Gene Family | AT4G25160 | 50.7 | 1.0e-217 | 753.8 | |
| Cla06g01636 | . | 1 | 478 | U-box Gene Family | AT5G65200 | 50.1 | 2.9e-88 | 323.2 | |
| Cla09g01823 | . | 1 | 551 | U-box Gene Family | AT5G40140 | 53.9 | 1.6e-94 | 344.0 | |
| Cla06g01636 | . | 27 | 477 | U-box Gene Family | AT5G40140 | 51.5 | 2.1e-59 | 227.3 | |
| Cla01g01396 | . | 29 | 498 | U-box Gene Family | AT5G40140 | 52.1 | 2.9e-56 | 216.9 | |
| Cla08g00936 | . | 77 | 885 | U-box Gene Family | AT1G76390 | 61.2 | 4.1e-269 | 924.5 | |
| Cla08g00936 | . | 86 | 885 | U-box Gene Family | AT1G20780 | 61.7 | 4.8e-278 | 954.1 | |
| Cla08g01687 | . | 1 | 820 | U-box Gene Family | AT1G27910 | 59.6 | 1.4e-261 | 899.4 | |
| Cla11g01354 | . | 209 | 1013 | U-box Gene Family | AT1G27910 | 57.8 | 1.1e-247 | 853.2 | |
| Cla01g01716 | . | 394 | 985 | U-box Gene Family | AT5G67530 | 74.0 | 3.4e-260 | 894.4 | |
| Cla05g00226 | . | 77 | 207 | U-box Gene Family | AT5G67530 | 55.7 | 5.9e-39 | 159.5 | |
| Cla10g01783 | . | 12 | 150 | U-box Gene Family | AT5G67530 | 50.4 | 1.1e-37 | 155.2 | |
| Cla05g00413 | . | 48 | 530 | U-box Gene Family | AT1G04510 | 70.6 | 3.1e-193 | 671.8 | |
| Cla05g00413 | . | 48 | 504 | U-box Gene Family | AT2G33340 | 72.5 | 8.4e-193 | 670.2 | |
| Cla07g00205 | . | 10 | 278 | U-box Gene Family | AT3G07370 | 66.9 | 3.0e-102 | 368.6 |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0008876 | 1 | 1 | 1 | 2 | 1 | 0 | 2 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 27 |
Regulatory proteins
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 80911 | PF00069 | Pkinase | 1.90E-40 | CL0016 | Cla | PK |
Transcriptome
| Select | Gene | Chr | Type | da1 | da2 | da3 | da4 | da5 | da6 | da7 | da8 | da9 | da10 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Cla11g00152 | Cla_Chr11 | FPKM | 25.248749 | 24.811884 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |