Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla11g00152 | ATGACATCCGTGGCGGTTGCCGTTAACGGCGTCCGCGGCGGCAAAGGCGGCGGAGCAAGCCGCCGCGCTGTCAGATGGGCCGTCGAGAATCTCTTGCCGACCGCCGATCGCTTCATTTTGGTTCACGTTATGCCCAAAATCACCTCCATCCCCACCCCAATGGGGGATCTTGTTGCTGTCTCTGAACTTGATGCAGATGTGGTAGCTCTTTATGTTCATGATATGAAAAAGAAATATGAACAAGTTTTTGTACCTTTTAAGAAGTTATGTAGAAGAGAAAAGTTTCTTCTTCTGGTAGAAACTTTGATTTTGGAGGATGACAATCCTGCCACTGCACTTTTGAGATATGCATCTCAATCTGGGATTAAATGCTTGGTTTTGGGTTCTTGTTTTAGAACTTGCATAGCAAGGAAGATAAAAGGGGATTCAGTACCCTCTGCTATTATGAGAACTGCTAGTTCTTTTGATATTTATGTTATATATAAGAGGAGAGTTATCACACGAACCGCTAGTACTGCTCCATCTAGTGAAACTGACTCGAGGCAGTGGATGCTTGGTGACACTGATTATTACAGGGGTTTCAGTGCTGTTAGTGAAAAATTATCAGGAACTTCCTCTCCTTCTTCCTTGTCGATTGGACATCGAAGGGGTGATAGCCTCGAAGTTAACTCTACTGAGCAACTGAACTCTTTAAGCACTCTGACTGAGGAGGTGGGATTTTGTCGATATTTCGTGGTGATGCGACGGCGAGTCTTAAATGAAGGTCCTGCATTGCAGGAAGATATGCGGGCTGAAGTTGAATCTCTGCAGCTAGAACTAGAGACCACTGTTTCCTTGTACAATCAAGCTTGTGAAGAACTAGTACATGCTCAGAAGAAGGTTCAGTCACTTACATCAGAATGCCTTGAAGAATCAAGAAAAGTGAATGCTGCTTTGGAAAGGGAACAATCTTTGAGGAAAGTTGCTGCTAAAGAGAAAGCAAAGCATTTGGAAGCCATTAAAGAGCTTGAGGAGGCTAAAGACTTGCTGGCTAAAGAAGCTTATGAGAGGCAGCTGGCTGAGCTTAATGCCATAAAGGAGTCCGTGGAGAAGCAGAAAATTCTTGATACTCTTCTGACTAATGATAGGAGGTACAGAAGATATACCACTGCCGAAATAGAAGCTGCAACAAATTTCTTCGACGAAGTTAATGTGATTGGCATCGGAGGATATGGGAAAGTCTACAAATGCAGTCTCGATCATACACCTGTAGCCATTAAGGTTTTTCAACACGACATATTCGAGAAAAAAGATGAGTTTCTGAAAGAGGTTGAAATTCTAAGTCAGATACGACATCTGCACGTGGTTTTACTGCTTGGAGCTTGTCCCGAGCGAGGTTGTTTGATCTATGAATACATGGAAAATGGAAGCTTAGATGATCATATCTTGCTCCGGAAAGGAAAAGCTCCCCTCCCTTGGTCTATTAGATTTAGAATAGTTTTTCAAGTAGCTTCTGGCCTTGCATTTTTACACAATTCAAAGCCAGAGCCTATCATTCATAGAGATCTCAAACCGGGTAATATCTTACTGGACAGAAACTTTGTAAGTAAAATCTCAGATGTTGGAATGGCTAAGATCATCGGCGATATTGTGCCGGACAATGTCACGGAGTACCGAAACACCATTCTTGCCGGTACTCTACATTACATGGATCCTGAATATCAGAGAACTGGCACACTCCGGCCAAAGTCAGATACGTACGCACTTGGGGTAACAATTCTGCAGTTGTTGACCGGGCGAGAACCACACGGTCTTCTTCTGGCTATTGAAAACTCCATCGCAAGCGCGTCCCTTGCAGATATTCTAGACAAGTCAATAACTGACTGGCCTCTGGCTGAAGCTGAAGAGTTAGCTCAACTCGCACTCAAGTGCTTGAAACTTAGATGCAGGGATAGGCCAGATCTTGAATCTGAAGTTCTTCCAGTCCTTAAAAGGCTTGTTGATTTTGCAGATTCTTGTCAAAATGAAGGCAAAAATCCTGCTAATCCCCCAAGCCACTACTTCTGCCCAATCCTACAGGAAATCATGGAGGACCCTTATATAGCAGCCGATGGCTTTACTTATGAGTATGTAGCCATTAAAGCATGGCTCGAGAAATACGACGTATCGCCGGTGACAAAGCTTAAGCTTCAGCATTCTATTTTTATTCCAAACCACACTCTGCTCTCTGCCATACTAGAGTGGAAGTCAAGAGTGACATTTCCATCTTCCTAA | 2253 | 43.59 | MTSVAVAVNGVRGGKGGGASRRAVRWAVENLLPTADRFILVHVMPKITSIPTPMGDLVAVSELDADVVALYVHDMKKKYEQVFVPFKKLCRREKFLLLVETLILEDDNPATALLRYASQSGIKCLVLGSCFRTCIARKIKGDSVPSAIMRTASSFDIYVIYKRRVITRTASTAPSSETDSRQWMLGDTDYYRGFSAVSEKLSGTSSPSSLSIGHRRGDSLEVNSTEQLNSLSTLTEEVGFCRYFVVMRRRVLNEGPALQEDMRAEVESLQLELETTVSLYNQACEELVHAQKKVQSLTSECLEESRKVNAALEREQSLRKVAAKEKAKHLEAIKELEEAKDLLAKEAYERQLAELNAIKESVEKQKILDTLLTNDRRYRRYTTAEIEAATNFFDEVNVIGIGGYGKVYKCSLDHTPVAIKVFQHDIFEKKDEFLKEVEILSQIRHLHVVLLLGACPERGCLIYEYMENGSLDDHILLRKGKAPLPWSIRFRIVFQVASGLAFLHNSKPEPIIHRDLKPGNILLDRNFVSKISDVGMAKIIGDIVPDNVTEYRNTILAGTLHYMDPEYQRTGTLRPKSDTYALGVTILQLLTGREPHGLLLAIENSIASASLADILDKSITDWPLAEAEELAQLALKCLKLRCRDRPDLESEVLPVLKRLVDFADSCQNEGKNPANPPSHYFCPILQEIMEDPYIAADGFTYEYVAIKAWLEKYDVSPVTKLKLQHSIFIPNHTLLSAILEWKSRVTFPSS | 750 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1806239 | 1811966 | - | ClCG11G001660.1 | Cla11g00152 | 283974 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla11g00152 | 750 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 16 | 142 | - | - | |
Cla11g00152 | 750 | SUPERFAMILY | RING/U-box | 667 | 744 | - | - | |
Cla11g00152 | 750 | PANTHER | U-BOX DOMAIN-CONTAINING PROTEIN 34 | 2 | 744 | - | - | |
Cla11g00152 | 750 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 675 | 746 | IPR013083 | - | |
Cla11g00152 | 750 | ProSiteProfiles | Protein kinase domain profile. | 393 | 656 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla11g00152 | 750 | CDD | RING-Ubox_WDSUB1_like | 680 | 720 | - | - | |
Cla11g00152 | 750 | ProSiteProfiles | U-box domain profile. | 675 | 748 | IPR003613 | GO:0004842|GO:0016567 | |
Cla11g00152 | 750 | SMART | Ubox_2 | 679 | 741 | IPR003613 | GO:0004842|GO:0016567 | |
Cla11g00152 | 750 | PANTHER | OS02G0152300 PROTEIN | 2 | 744 | - | - | |
Cla11g00152 | 750 | Coils | Coil | 319 | 365 | - | - | |
Cla11g00152 | 750 | Pfam | U-box domain | 677 | 742 | IPR003613 | GO:0004842|GO:0016567 | |
Cla11g00152 | 750 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 511 | 523 | IPR008271 | GO:0004672|GO:0006468 | |
Cla11g00152 | 750 | CDD | STK_N | 3 | 162 | - | - | |
Cla11g00152 | 750 | Gene3D | Transferase(Phosphotransferase) domain 1 | 466 | 673 | - | - | |
Cla11g00152 | 750 | Pfam | Protein kinase domain | 394 | 649 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla11g00152 | 750 | Pfam | Universal stress protein family | 18 | 151 | IPR006016 | - | |
Cla11g00152 | 750 | SUPERFAMILY | Protein kinase-like (PK-like) | 376 | 649 | IPR011009 | - | |
Cla11g00152 | 750 | SMART | serkin_6 | 393 | 656 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla11g00152 | 750 | Coils | Coil | 280 | 300 | - | - | |
Cla11g00152 | 750 | ProSitePatterns | Protein kinases ATP-binding region signature. | 399 | 420 | IPR017441 | GO:0005524 | |
Cla11g00152 | 750 | Gene3D | Phosphorylase Kinase; domain 1 | 372 | 465 | - | - | |
Cla11g00152 | 750 | Gene3D | HUPs | 2 | 160 | IPR014729 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g00450 | Cla-Chr1:4878826 | Cla11g00152 | Cla-Chr11:1806239 | 2.18E-09 | dispersed | |
Cla01g00454 | Cla-Chr1:4918871 | Cla11g00152 | Cla-Chr11:1806239 | 5.12E-144 | dispersed | |
Cla05g00164 | Cla-Chr5:1511538 | Cla11g00152 | Cla-Chr11:1806239 | 4.65E-107 | dispersed | |
Cla06g00344 | Cla-Chr6:4371393 | Cla11g00152 | Cla-Chr11:1806239 | 7.02E-74 | dispersed | |
Cla06g01694 | Cla-Chr6:30548137 | Cla11g00152 | Cla-Chr11:1806239 | 1.12E-07 | dispersed | |
Cla11g00152 | Cla-Chr11:1806239 | Cla11g01104 | Cla-Chr11:22448886 | 1.02E-10 | dispersed | |
Cla11g00152 | Cla-Chr11:1806239 | Cla09g00073 | Cla-Chr9:688045 | 6.65E-134 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80911 | PF00069 | Pkinase | 1.90E-40 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla11g00152 | - | - | cpep:111805862 | 1207.2 |