Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla11g00182 | ATGTCGTGGCAAACGTACGTCGATGATCATTTGATGTGCGACATTGATGGCCAAGGCCAGCACCTCACCGCCGCTGCCATTATCGGCCACGATGGCAGCGTCTGGGCTCAGAGCTCCTCATTTCCTCAGTTCAAGCCTGAGGAGATCACTGGTATCATGAAGGATTTTGATGAACCAGGTCATCTTGCACCTACTGGATTACACCTTGGAGGTACAAAGTATATGGTAATCCAAGGAGAGCCTGGAGCTGTCATCCGTGGAAAGAAGGGATCTGGAGGAATTACCATAAAGAAGACTGGTCAAGCTCTAGTCTTTGGAATTTATGAAGAACCTGTTACTCCAGGACAGTGCAACATGGTCGTTGAGAGGCTGGGTGATTACCTTGTCGATCAGGGTCTGAGGAAGAAGAAGAAGAAGAAGCAGCCGGGAAAGATGTCGTGGCAAGTTTACGTCGATGATCATTTGATGTGCGAAATTGAGGGCAATCACCTCACATCTGCGGCCATTATCGGCCAAGACGGCAGTGTTTGGGCTAAAAGCGAAAATTTCCCTCAGGTCGATGCATTACTTCGGGAATCCGGACTCAAGCCTGAAGAAATTACTGGCATCTTGAATGACTTCAATGAACCCGGGACGCTTGCTCCGACTGGTTTGTACATTGGTGGTTCAAAATATATGGTAATCCAAGGGGAGCCTGGAGCTGTTATTCGTGGGAAGAAGGGCCCAGGTGGGGTTACTGTTAAGAAGACTGCTCTGGCTTTAGTCATTGGCATCTATGATGAACCAATGACTCCTGGTCAGTGCAATATGATTGTTGAAAGGCTTGGGGATTATCTCGTCGAACAGGGCCTCTAA | 855 | 48.42 | MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSSSFPQFKPEEITGIMKDFDEPGHLAPTGLHLGGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLVDQGLRKKKKKKQPGKMSWQVYVDDHLMCEIEGNHLTSAAIIGQDGSVWAKSENFPQVDALLRESGLKPEEITGILNDFNEPGTLAPTGLYIGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTALALVIGIYDEPMTPGQCNMIVERLGDYLVEQGL | 284 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2171837 | 2177432 | + | ClCG11G002020.2 | Cla11g00182 | 284004 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla11g00182 | 284 | ProSitePatterns | Profilin signature. | 1 | 8 | IPR027310 | GO:0003779 | |
Cla11g00182 | 284 | PANTHER | PROFILIN | 145 | 284 | IPR005455 | GO:0003779 | |
Cla11g00182 | 284 | PANTHER | PROFILIN | 1 | 133 | IPR005455 | GO:0003779 | |
Cla11g00182 | 284 | PRINTS | Plant profilin signature | 1 | 14 | IPR005455 | GO:0003779 | |
Cla11g00182 | 284 | PRINTS | Plant profilin signature | 54 | 68 | IPR005455 | GO:0003779 | |
Cla11g00182 | 284 | PRINTS | Plant profilin signature | 86 | 101 | IPR005455 | GO:0003779 | |
Cla11g00182 | 284 | PRINTS | Plant profilin signature | 29 | 42 | IPR005455 | GO:0003779 | |
Cla11g00182 | 284 | PRINTS | Plant profilin signature | 73 | 82 | IPR005455 | GO:0003779 | |
Cla11g00182 | 284 | PRINTS | Plant profilin signature | 106 | 119 | IPR005455 | GO:0003779 | |
Cla11g00182 | 284 | PRINTS | Plant profilin signature | 119 | 132 | IPR005455 | GO:0003779 | |
Cla11g00182 | 284 | CDD | PROF | 146 | 283 | IPR005455 | GO:0003779 | |
Cla11g00182 | 284 | SUPERFAMILY | Profilin (actin-binding protein) | 146 | 283 | IPR036140 | - | |
Cla11g00182 | 284 | PANTHER | PROFILIN | 1 | 133 | - | - | |
Cla11g00182 | 284 | PANTHER | PROFILIN | 145 | 284 | - | - | |
Cla11g00182 | 284 | Gene3D | Dynein light chain 2a, cytoplasmic | 1 | 133 | - | - | |
Cla11g00182 | 284 | Gene3D | Dynein light chain 2a, cytoplasmic | 143 | 284 | - | - | |
Cla11g00182 | 284 | SMART | prof_2 | 1 | 133 | IPR005455 | GO:0003779 | |
Cla11g00182 | 284 | SMART | prof_2 | 145 | 284 | IPR005455 | GO:0003779 | |
Cla11g00182 | 284 | Pfam | Profilin | 1 | 132 | IPR005455 | GO:0003779 | |
Cla11g00182 | 284 | Pfam | Profilin | 145 | 283 | IPR005455 | GO:0003779 | |
Cla11g00182 | 284 | SUPERFAMILY | Profilin (actin-binding protein) | 2 | 132 | IPR036140 | - | |
Cla11g00182 | 284 | PRINTS | Profilin signature | 3 | 12 | IPR005455 | GO:0003779 | |
Cla11g00182 | 284 | PRINTS | Profilin signature | 42 | 62 | IPR005455 | GO:0003779 | |
Cla11g00182 | 284 | PRINTS | Profilin signature | 66 | 80 | IPR005455 | GO:0003779 | |
Cla11g00182 | 284 | PRINTS | Profilin signature | 115 | 132 | IPR005455 | GO:0003779 | |
Cla11g00182 | 284 | PRINTS | Profilin signature | 23 | 32 | IPR005455 | GO:0003779 | |
Cla11g00182 | 284 | PRINTS | Profilin signature | 102 | 115 | IPR005455 | GO:0003779 | |
Cla11g00182 | 284 | CDD | PROF | 2 | 132 | IPR005455 | GO:0003779 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla09g00022 | Cla-Chr9:276663 | Cla11g00182 | Cla-Chr11:2171837 | 2.58E-73 | dispersed | |
Cla11g00182 | Cla-Chr11:2171837 | Cla11g01470 | Cla-Chr11:28339638 | 8.49E-59 | dispersed | |
Cla11g00182 | Cla-Chr11:2171837 | Cla07g01272 | Cla-Chr7:29844969 | 5.27E-64 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla11g00182 | K05759 | - | twl:120006331 | 263.462 |