Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00183 ATGAAGACCAAGACGCCATTGAAGCAGCTCAAGCTCTCTGTTCCTGTTCAAGAAACTTCCATCCGTTCTTTCCTGACTGCGAGTGGAACATTTCACGACGGCAATCTACTACTGAACCAGAAAGGATTACGGCTTGTATCTGAAGAGAAAGAAGCGCAGACTTCAGATTGTAAGGAGCTTGATGTTGATTTCTCATTGGAAGATCTTGAGACTGTGAAAGTTATTGGAAAAGGAAGTGGAGGTGTAGTACAACTTGTTCGACACAAGTGGGTTGGAAAACTTTTTGCCTTAAAGATCTGTGAAAGAAAACAATTGAGTTTTGATAATGAAGTGGTAAAAGCTAGATCTGGCAGTTCCTCAGTGGTGACTGGTGAGAGTAATACGGTAATCCAGATGAACATACAAGAGGATATCCGTAAACAGATAGTACAGGAACTGAAAATTAATCAAGCAGCACAATGTCCACATATTGTGGTCTGCTATCATTCTTTCTACCACAATGGTGCCATTTCTCTTGTGCTAGAATACATGGATCGCGGTTCTCTAGCCGATGTAGTCAGACAAATCAAAACAATTCTTGAACCATATCTTGCAGTTGTTTGTAAACAGGTTTTACAAGGTCTTGTTTACTTGCATCATGAGAGGCATGTTATACACAGAGACATCAAGCCATCCAATCTACTTGTTAACCATAAAGGTGAGGTCAAAATCACTGATTTTGGAGTAAGTGCGATGCTAGCAAGTTCTATGGGTCAAAGAGATACATTTGTAGGGACGTACAATTACATGTCGCCTGAACGAATTAGTGGGGGAACATATGACTACAGCAGTGATATATGGAGTTTGGGCTTGGTAGTACTTGAATGTGCCATCGGAAGGTTTCCTTATTTGCAGTCTGAAGAGCAGCAAAGTTGGCCAAGCTTTTATGAACTCCTAGAGGCAATTGTAGCAAAGCCACCGCCTTCTGCCCCACCGGATCAATTTTCCCCCGACATTAAGAAGGATCCTAAAGAAAGATCGTCATCATTAGATCTTCTGAATCATCCTTTCATCCAGAAATTCGAAGATAAAGACATTGATGTCGGGATTCTCGTAGGCAGCTTGGATCCTCCGGTAAGTTTTCCCAGATAA 1131 41.56 MKTKTPLKQLKLSVPVQETSIRSFLTASGTFHDGNLLLNQKGLRLVSEEKEAQTSDCKELDVDFSLEDLETVKVIGKGSGGVVQLVRHKWVGKLFALKICERKQLSFDNEVVKARSGSSSVVTGESNTVIQMNIQEDIRKQIVQELKINQAAQCPHIVVCYHSFYHNGAISLVLEYMDRGSLADVVRQIKTILEPYLAVVCKQVLQGLVYLHHERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLASSMGQRDTFVGTYNYMSPERISGGTYDYSSDIWSLGLVVLECAIGRFPYLQSEEQQSWPSFYELLEAIVAKPPPSAPPDQFSPDIKKDPKERSSSLDLLNHPFIQKFEDKDIDVGILVGSLDPPVSFPR 376
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2179226 2182818 + ClCG11G002030.2 Cla11g00183 284005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00183 376 MobiDBLite consensus disorder prediction 320 344 - -
Cla11g00183 376 Gene3D Phosphorylase Kinase; domain 1 38 178 - -
Cla11g00183 376 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Cla11g00183 376 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6 1 101 - -
Cla11g00183 376 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6 129 375 - -
Cla11g00183 376 SUPERFAMILY Protein kinase-like (PK-like) 67 359 IPR011009 -
Cla11g00183 376 Gene3D Transferase(Phosphotransferase) domain 1 180 365 - -
Cla11g00183 376 ProSiteProfiles Protein kinase domain profile. 69 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00183 376 Pfam Protein kinase domain 133 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00183 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Cla11g00183 376 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 101 - -
Cla11g00183 376 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 129 375 - -
Cla11g00183 376 CDD PKc_MAPKK_plant_like 67 355 - -
Cla11g00183 376 SMART serkin_6 69 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla10g01325 Cla-Chr10:28198744 Cla11g00183 Cla-Chr11:2179226 8.52E-65 dispersed
Cla11g00151 Cla-Chr11:1802433 Cla11g00183 Cla-Chr11:2179226 4.74E-119 dispersed
Cla11g00183 Cla-Chr11:2179226 Cla05g00223 Cla-Chr5:1993434 8.30E-34 dispersed
Cla11g00183 Cla-Chr11:2179226 Cla03g01476 Cla-Chr3:30269699 1.56E-145 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80913 PF00069 Pkinase 7.80E-51 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00183 K04368 - csv:101218848 641.343