Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla11g00183 | ATGAAGACCAAGACGCCATTGAAGCAGCTCAAGCTCTCTGTTCCTGTTCAAGAAACTTCCATCCGTTCTTTCCTGACTGCGAGTGGAACATTTCACGACGGCAATCTACTACTGAACCAGAAAGGATTACGGCTTGTATCTGAAGAGAAAGAAGCGCAGACTTCAGATTGTAAGGAGCTTGATGTTGATTTCTCATTGGAAGATCTTGAGACTGTGAAAGTTATTGGAAAAGGAAGTGGAGGTGTAGTACAACTTGTTCGACACAAGTGGGTTGGAAAACTTTTTGCCTTAAAGATCTGTGAAAGAAAACAATTGAGTTTTGATAATGAAGTGGTAAAAGCTAGATCTGGCAGTTCCTCAGTGGTGACTGGTGAGAGTAATACGGTAATCCAGATGAACATACAAGAGGATATCCGTAAACAGATAGTACAGGAACTGAAAATTAATCAAGCAGCACAATGTCCACATATTGTGGTCTGCTATCATTCTTTCTACCACAATGGTGCCATTTCTCTTGTGCTAGAATACATGGATCGCGGTTCTCTAGCCGATGTAGTCAGACAAATCAAAACAATTCTTGAACCATATCTTGCAGTTGTTTGTAAACAGGTTTTACAAGGTCTTGTTTACTTGCATCATGAGAGGCATGTTATACACAGAGACATCAAGCCATCCAATCTACTTGTTAACCATAAAGGTGAGGTCAAAATCACTGATTTTGGAGTAAGTGCGATGCTAGCAAGTTCTATGGGTCAAAGAGATACATTTGTAGGGACGTACAATTACATGTCGCCTGAACGAATTAGTGGGGGAACATATGACTACAGCAGTGATATATGGAGTTTGGGCTTGGTAGTACTTGAATGTGCCATCGGAAGGTTTCCTTATTTGCAGTCTGAAGAGCAGCAAAGTTGGCCAAGCTTTTATGAACTCCTAGAGGCAATTGTAGCAAAGCCACCGCCTTCTGCCCCACCGGATCAATTTTCCCCCGACATTAAGAAGGATCCTAAAGAAAGATCGTCATCATTAGATCTTCTGAATCATCCTTTCATCCAGAAATTCGAAGATAAAGACATTGATGTCGGGATTCTCGTAGGCAGCTTGGATCCTCCGGTAAGTTTTCCCAGATAA | 1131 | 41.56 | MKTKTPLKQLKLSVPVQETSIRSFLTASGTFHDGNLLLNQKGLRLVSEEKEAQTSDCKELDVDFSLEDLETVKVIGKGSGGVVQLVRHKWVGKLFALKICERKQLSFDNEVVKARSGSSSVVTGESNTVIQMNIQEDIRKQIVQELKINQAAQCPHIVVCYHSFYHNGAISLVLEYMDRGSLADVVRQIKTILEPYLAVVCKQVLQGLVYLHHERHVIHRDIKPSNLLVNHKGEVKITDFGVSAMLASSMGQRDTFVGTYNYMSPERISGGTYDYSSDIWSLGLVVLECAIGRFPYLQSEEQQSWPSFYELLEAIVAKPPPSAPPDQFSPDIKKDPKERSSSLDLLNHPFIQKFEDKDIDVGILVGSLDPPVSFPR | 376 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2179226 | 2182818 | + | ClCG11G002030.2 | Cla11g00183 | 284005 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla11g00183 | 376 | MobiDBLite | consensus disorder prediction | 320 | 344 | - | - | |
Cla11g00183 | 376 | Gene3D | Phosphorylase Kinase; domain 1 | 38 | 178 | - | - | |
Cla11g00183 | 376 | ProSitePatterns | Protein kinases ATP-binding region signature. | 75 | 98 | IPR017441 | GO:0005524 | |
Cla11g00183 | 376 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6 | 1 | 101 | - | - | |
Cla11g00183 | 376 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6 | 129 | 375 | - | - | |
Cla11g00183 | 376 | SUPERFAMILY | Protein kinase-like (PK-like) | 67 | 359 | IPR011009 | - | |
Cla11g00183 | 376 | Gene3D | Transferase(Phosphotransferase) domain 1 | 180 | 365 | - | - | |
Cla11g00183 | 376 | ProSiteProfiles | Protein kinase domain profile. | 69 | 351 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla11g00183 | 376 | Pfam | Protein kinase domain | 133 | 351 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla11g00183 | 376 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 217 | 229 | IPR008271 | GO:0004672|GO:0006468 | |
Cla11g00183 | 376 | PANTHER | MITOGEN-ACTIVATED KINASE KINASE KINASE | 1 | 101 | - | - | |
Cla11g00183 | 376 | PANTHER | MITOGEN-ACTIVATED KINASE KINASE KINASE | 129 | 375 | - | - | |
Cla11g00183 | 376 | CDD | PKc_MAPKK_plant_like | 67 | 355 | - | - | |
Cla11g00183 | 376 | SMART | serkin_6 | 69 | 351 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla10g01325 | Cla-Chr10:28198744 | Cla11g00183 | Cla-Chr11:2179226 | 8.52E-65 | dispersed | |
Cla11g00151 | Cla-Chr11:1802433 | Cla11g00183 | Cla-Chr11:2179226 | 4.74E-119 | dispersed | |
Cla11g00183 | Cla-Chr11:2179226 | Cla05g00223 | Cla-Chr5:1993434 | 8.30E-34 | dispersed | |
Cla11g00183 | Cla-Chr11:2179226 | Cla03g01476 | Cla-Chr3:30269699 | 1.56E-145 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80913 | PF00069 | Pkinase | 7.80E-51 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla11g00183 | K04368 | - | csv:101218848 | 641.343 |