Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00214 ATGGAACCTTCATCGGCCAAGAGCTGGAGCATCCACACTCGGCCGGATATCATCCAGAAGTACGAGATCCTCGAGCGGATCGGATCCGGCGCTTATTCCGATGTCCACCGTGCGCGGCGGCTCTCCGATGGCGTTATCGTCGCTTTGAAGGAGATCCACGATTATCAGTCGGCGTTCCGCGAAATCGAGGCGCTTCAAATCCTTCAAGGTTCGCCTAATATCGTCGTTCTGCACGAGTACTTTTGGCGCGAGGATGAGGATGCCGTGCTTGTTCTCGAGTTTATGAGAACGGATTTGGCCACCGTTATAGCGGAGGCGAAGAAGCGAGGATCGGACGGGGTAGAATCTGGGCGGGGGCTTCCGGCCGGGGAGTTGAAGCGGTGGATGATCCAGATTTTGAGTGGTCTTGATGCTTGTCACAGAAATATGATCGTGCATAGGGATATGAAACCTAGCAATTTGTTGATCTCCGATGATGGCGTGCTCAAGCTTGCCGATTTTGGACAGGCAAGGATACTCATGGAGCCTGAATATGTTGAATCGAATGAGATCTCTCAACCATGTGAGATGAACTCTTCAGATCAGGTGCCTGCTTCTCAGCCATCTACAATTTTTCCAGGAACAGAAAGCTCGGTTCGAGAAGGTAACAGAACTGAGGAACAAGAACCAATTAGCAAAGAAGAATATTTTAGAGTTTTAGACGAGTTGAAAGCAAAAAATTCAGCAAATGAATTTGACAAGGAAACATATACTTATGATGGAGATACATCTTGCTTAGCAACATGTACCACAAGTGACCTTGAAGATGATCCATTCAAAGGTTCATCATATTCTTACGAAATGGAAGGGGGAGTTCCAGCAGATGATGGACAAGGTTCTCTCACCTCATGTGTTGGTACTCGCTGGTTCAGGGCCCCTGAATTACTCTATGGCTCTACGAGCTACGGTTTGGAGATCGACTTATGGGCATTGGGCTGCATTTTTGCTGAACTTTTTACATTGGAACCCCTTTTTCCAGGAACTGCTGACATTGATCAAATGAGCAAAATCTTCACTACTCTAGGCAACTTGACTGAAGATTCGTGGCCAGGTTGTTCCGAACTTCCTGATTTTCAAATTATATCATTCAACACAATAGAAAAGCCGATCGGTCTAGAAGCATGTCTTCCCAACTGTTCTCCTGATGAAATTTCTATTGTTAAAAGACTTCTTTGTTACAACCCGGCTAATCGAGCGACTGCTATGGAATTGTTACAAGATAAGTATTTCACTGAGGAGCCACTTCCCGTTCCCTTGTCTGAGCTACATGTTCCTACGACAAAAACTGGACAGGATGAGGATTCTCCTGCAGGATGGTACGACTACAATGAGTTGGATTCTGATATGGATGAATTCGGCCCCATGAATGTTACCACCACTGCCACTGGCTATTTATTATCCTACGATACCATAATCGCTCTTCAGTCTTCCTACTTAAAACACCAAAAGCTTGGAGAACTCAGATGTCAGAATAGTTATCCTGATGTTCTTCTTGAAGGATATTTGCATGTGGAAAATACTGGATTATTGCCCTCGACAATTTTGTCGAAAATCTACTGCCCTCAGAATCTAAGGGTGCAAAACCCATACGATGCTCGCTTCTATGAATTCTCACCGTTGGATCATATCGAATTGCTTTCACCGTTAGATTTAACCACAGGTCTTAATCGCACCGATTTAAATTTGATGGGGGAAGAAGATTCCGTGGGTGCGTCTCAGAAGAAGGCTCAATCAGATGGTGCAGCGTTGAGTAATTCTTCGTCATCGGATATTCCGTCTAAGAAGCTCGCTAGGCAGCTCGATTTCACCGGCTATGGAGGTGCCTCGCATCCTCAATCTCATTCAAACTCGCATTCACAGTCACAGGCTCCATTAGTTGCGCAGAATCTTCCGCAAGCTCAGCCAAAGCCACAGACGCAGACGCAGATGGTGGCGGCGGCGATCGCACCTTTGGCTCCTCATTCGTCAGTAAGAGCTGTGAAACCGGAATCACCAATGTCAAGAGCAAGACCTGCTGTTGAAGCTAAAGACAGTACTCCTAAGAAGCAAAAGCAGTGTAACTGTAAACACTCGCGGTGTCTAAAATTGTACTGTGAATGCTTTGCTTCTGGAATATATTGTGATGGTTGCAACTGCATCAATTGTTATAACAATGTTGAAAATGATGCTGCTAGAAGAGAAGCAGTTGAAGCTACATTAGAGCGTAATCCAAATGCATTTCGACCCAAAATTGCCAGCAGCCCTCATGGAATGCGGGACAGCAGGGAGGAGGCGGGGGAGTTGCTGATGTTGGGTAAGCACAATAAGGGGTGCCACTGCAAGAAATCGGGTTGTCTAAAAAAGTATTGTGAGTGTTTCCAGGCCAACATTCTCTGTTCAGAAAATTGTAAATGCATGGATTGCAAGAATTTTGAGGGAAGTGAAGAGAGGCAAGCTCTTTTCCATGGAGACCATGGTAACAACATGACATTCATTCAACAGGCAGCTAATGCTGCCATAACTGGAGCTATTGGCTCCTCTGGTTATGCTTCACCTCCTGTATCCAAGAAAAGAAAAGGTCAAGAACTCTACTTTGGACCAACAGCCAAGGACATATCCACCCATAGACCAGTGGCATTTCAACAGGCAAATCATATCAGAGCCACTGCTCCTCCGCTACCGTCCTTCCCCATTGCTGGTGTAGGTAGCCCGTCGTTGTTGGGTCCTTCAAAGTTCACGTATAGGTCTTTAATGGCAGACATCATTCAATCACAAGATTTGAAGGATCTTTGCTCTGTTTTGGTTGTGCTGTCGAGTGAAGCTGCCAAGACAATTCAAGACCAAACAAGTGCTACAGAAAAGCAATCTGATGGCCAGACTGAAACTTCTGTTGCATCATCCTCTCAAGATAGGTTGCAGAAAAAAGATGCATCTGATGAGAAAGCTGCAGCCGATGATCGTTCTAGTGCAAACCAGGCTGATAAAACCACCCCCGACGATTCCAATTCAGATGGTGGAGATGTGCCAAAGGGCGCACCCATGTCACCCGGAACTTTAGCTTTGATGTGTGATGAGCAAGATACAATGCTAATGGCTGCTGCTTCTCCCAATAGACTAATGGGTCCTGGCTGCAGCACCTCTTCACAACTGCCTCATGGACGAGACACGTCAGAGGTCTATGCAGAGCAGGAGAGGATCGTCCTTACAAAGTTTAGGGATTGTCTTAATAGACTCATCACTTTGGGAGAGATAAAAGAGACACAATGTTCATCTTTAGCCAGAAGTGAAGTAGGTAATCAAGAACAACAATTTAACAATGGCACTACAAATTCTAGAACTGAAACTCAAAGTAATTTGGGCCAACTCAACAATAAAGTTATGAAATCTTCAATTACACCGTCAGTGAAGACATCGCAGACAGTGACAACCCCAGCAGTTATGACCCTTAGTAACGACCAGCGACAGAAAGTTTTGCCTCTGTCTTGA 3504 45.46 MEPSSAKSWSIHTRPDIIQKYEILERIGSGAYSDVHRARRLSDGVIVALKEIHDYQSAFREIEALQILQGSPNIVVLHEYFWREDEDAVLVLEFMRTDLATVIAEAKKRGSDGVESGRGLPAGELKRWMIQILSGLDACHRNMIVHRDMKPSNLLISDDGVLKLADFGQARILMEPEYVESNEISQPCEMNSSDQVPASQPSTIFPGTESSVREGNRTEEQEPISKEEYFRVLDELKAKNSANEFDKETYTYDGDTSCLATCTTSDLEDDPFKGSSYSYEMEGGVPADDGQGSLTSCVGTRWFRAPELLYGSTSYGLEIDLWALGCIFAELFTLEPLFPGTADIDQMSKIFTTLGNLTEDSWPGCSELPDFQIISFNTIEKPIGLEACLPNCSPDEISIVKRLLCYNPANRATAMELLQDKYFTEEPLPVPLSELHVPTTKTGQDEDSPAGWYDYNELDSDMDEFGPMNVTTTATGYLLSYDTIIALQSSYLKHQKLGELRCQNSYPDVLLEGYLHVENTGLLPSTILSKIYCPQNLRVQNPYDARFYEFSPLDHIELLSPLDLTTGLNRTDLNLMGEEDSVGASQKKAQSDGAALSNSSSSDIPSKKLARQLDFTGYGGASHPQSHSNSHSQSQAPLVAQNLPQAQPKPQTQTQMVAAAIAPLAPHSSVRAVKPESPMSRARPAVEAKDSTPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCINCYNNVENDAARREAVEATLERNPNAFRPKIASSPHGMRDSREEAGELLMLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHGNNMTFIQQAANAAITGAIGSSGYASPPVSKKRKGQELYFGPTAKDISTHRPVAFQQANHIRATAPPLPSFPIAGVGSPSLLGPSKFTYRSLMADIIQSQDLKDLCSVLVVLSSEAAKTIQDQTSATEKQSDGQTETSVASSSQDRLQKKDASDEKAAADDRSSANQADKTTPDDSNSDGGDVPKGAPMSPGTLALMCDEQDTMLMAAASPNRLMGPGCSTSSQLPHGRDTSEVYAEQERIVLTKFRDCLNRLITLGEIKETQCSSLARSEVGNQEQQFNNGTTNSRTETQSNLGQLNNKVMKSSITPSVKTSQTVTTPAVMTLSNDQRQKVLPLS 1167
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2487351 2497089 + ClCG11G002360.2 Cla11g00214 284036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00214 1167 MobiDBLite consensus disorder prediction 669 696 - -
Cla11g00214 1167 MobiDBLite consensus disorder prediction 188 223 - -
Cla11g00214 1167 SUPERFAMILY Protein kinase-like (PK-like) 7 441 IPR011009 -
Cla11g00214 1167 MobiDBLite consensus disorder prediction 978 994 - -
Cla11g00214 1167 PANTHER TESMIN/TSO1-RELATED 665 1153 IPR028307 -
Cla11g00214 1167 PANTHER TESMIN/TSO1-RELATED 601 656 IPR028307 -
Cla11g00214 1167 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Cla11g00214 1167 Gene3D Transferase(Phosphotransferase) domain 1 264 434 - -
Cla11g00214 1167 Gene3D Transferase(Phosphotransferase) domain 1 114 205 - -
Cla11g00214 1167 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Cla11g00214 1167 MobiDBLite consensus disorder prediction 950 1025 - -
Cla11g00214 1167 MobiDBLite consensus disorder prediction 579 636 - -
Cla11g00214 1167 MobiDBLite consensus disorder prediction 584 607 - -
Cla11g00214 1167 MobiDBLite consensus disorder prediction 950 977 - -
Cla11g00214 1167 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 665 1153 - -
Cla11g00214 1167 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 601 656 - -
Cla11g00214 1167 Pfam Protein kinase domain 291 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00214 1167 Pfam Protein kinase domain 21 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00214 1167 MobiDBLite consensus disorder prediction 995 1009 - -
Cla11g00214 1167 SMART serkin_6 21 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00214 1167 ProSiteProfiles Protein kinase domain profile. 21 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00214 1167 SMART CXC_2 779 820 IPR033467 -
Cla11g00214 1167 SMART CXC_2 694 734 IPR033467 -
Cla11g00214 1167 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 696 731 IPR005172 -
Cla11g00214 1167 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 782 816 IPR005172 -
Cla11g00214 1167 ProSiteProfiles CRC domain profile. 695 819 IPR005172 -
Cla11g00214 1167 Gene3D Phosphorylase Kinase; domain 1 13 111 - -
Cla11g00214 1167 MobiDBLite consensus disorder prediction 188 212 - -
Cla11g00214 1167 MobiDBLite consensus disorder prediction 619 636 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla06g00866 Cla11g00214 CCT
Cla06g00866 Cla11g00214 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01225 Cla-Chr7:29213260 Cla11g00214 Cla-Chr11:2487351 1.42E-10 dispersed
Cla08g01314 Cla-Chr8:26049978 Cla11g00214 Cla-Chr11:2487351 3.05E-28 dispersed
Cla11g00214 Cla-Chr11:2487351 Cla06g01436 Cla-Chr6:27929686 1.39E-17 dispersed
Cla11g00214 Cla-Chr11:2487351 Cla06g00866 Cla-Chr6:13008632 5.79E-108 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
61994 PF00069 Pkinase 1.40E-31 CL0016 Cla TF
80915 PF00069 Pkinase 1.40E-31 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00214 - - csv:101211978 1093.57