Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00221 ATGTCAACCCCTACTCCGGCGCCGACGTCTCCGCCGGCGACCAATACGACGTCTCCGCCGCCACCAACCCCTAGTGCTCCGCCACCATCGACTCCAACGCAACCTCCGCCGTCCACTACACCACCACCAACAACCACTCCGTCACCGCCTCCGCCTTCCGCTGCAACGCCGCCCACTCCTTCTCGGCCCCCGCCGACTTCCGCGCCACCTCCGGCCACCCCGTCACTGCCTCCACCGTCTACTCCCCAACCCGCCCCGCCCACTGCATCTCCCTCGCCGCCGGCTTCCACCCCTCCGCCGTCCAGGCCTTCGACTTCTCCACCTCCTCCGTCTTCTACTAGCCCTCCGTCTCCTCCAACTGGCCGTAGTCCGCCGCCACCAACTTCTCGTACGCCGTCCACTCCGTCAAGAAGTCCTCCACCTCCCTCAACGTCGTCGTCGTCGTCCTCCTCCTCTTCTAATATTTCAACTGGACTTGTTGTCGGAATTGCAATTGGTGGAGTGGTAATTGTTCTTCTGCTAAGTATATTGTGCCTTTGTTGTACGAAGAAAAGGAGAAGACGACGCGATGAAGAGGGATTTTATCCACACCCTCCGCCTGGCCCTAAAGTTGACCCTTATGCTGGTCAGCAGCAATGGCAGCACAATGGTCCTCTACCGCCTGATCCTTTAATCGGGACGGTGCCTAAGCCATCTCCTCCTCCGGTAGTTGCATCTCGACCCCCGCATTCTCCGACTGGCGTTCGTCCTCCACCTCAACCGCTCTATATGAGTAGCAGTGGAGGTTCGGGTTCTATGTATTCTGGGCCTGAAACGCCGCTCCCTCCGCCGCCTCCCCCTCCTATGGCCTTTGGTTTCTCAAAGAGTACTTTTACTTATGAGGAATTGGCAATGGCGACGGATGGCTTCTCGGATGCAAATCTCCTCGGACAAGGTGGATTCGGATATGTGCATAGAGGAGTTCTTCCTAATGGAAAGGAAGTTGCAGTCAAGCAGTTGAAAGCTGGGAGCGGGCAGGGCGAACGAGAATTTCAGGCCGAAGTTGATATTATCAGCCGAGTTCATCATAAACATCTTGTTTCTTTGGTTGGATATTGCATAACTGGGTCTCAAAGATTGCTTGTTTATGAGTTTGTTCCAAACAACACTTTAGAGTTCCATTTACATGGTAAAGGGCGGCCAACGATGGATTGGCAGACAAGACTTAAAATCGCATTAGGATCAGCAAAAGGACTAGCTTATATTCATGAGGATTGTCACCCGAAAATCATTCATCGCGATATTAAGGCTGCTAACATATTGTTAGATTTCAAGTTTGAAGCAAAGGTTGCTGATTTTGGACTTGCAAAGTTTACTTCTGATGTCAATACCCATGTATCAACTCGAGTGATGGGTACTTTTGGGTATCTTGCACCAGAGTATGCCTCTAGTGGCAAACTTACTGAGAAATCAGATGTTTTCTCCTTTGGGGTTATGCTTTTGGAGTTGATCACTGGTCGTCGACCAGTTGATATGAGTAATACTTCCATGGAAGATAGTCTTGTGGACTGGGCTAGACCGCTAATGAACCGAGCTTTAGAAGATGGAAACTTTGATGCTTTGGTTGATCCAAGGATGCAAAACAACTACAACCACAATGAGATGGCTCGCATGGTTGCCTGTGCTGCTGCTTGTGTTCGACATTCTGCTAGGCGTCGACCACGAATGAGTCAGGTAGTACGAGCGCTCGAAGGAGACACATCACTATCGGATCTCAACGAAGGAGTCAAACCCGGGCAGAGCACAATGTACAGTTCTCATGGAAGCTCAGATTATGACACTCACCAGTACAACGAGGACTTGAGAAAGTTCAGGAAGATGGCACTGGGAAGTACAGAATATGGAGCAAGCAGCGAATACAGCGGACCAACGAGCGAGTACGGTCTGTATCCTTCGGGATCGAGCAGCGAAGGGCAAACCACCAGAGAAATGGAGATGAGAACAGCAAAGAAAGAAAGTGGAGGCTTCAGTGGACGCTCTTGA 2022 51.48 MSTPTPAPTSPPATNTTSPPPPTPSAPPPSTPTQPPPSTTPPPTTTPSPPPPSAATPPTPSRPPPTSAPPPATPSLPPPSTPQPAPPTASPSPPASTPPPSRPSTSPPPPSSTSPPSPPTGRSPPPPTSRTPSTPSRSPPPPSTSSSSSSSSSNISTGLVVGIAIGGVVIVLLLSILCLCCTKKRRRRRDEEGFYPHPPPGPKVDPYAGQQQWQHNGPLPPDPLIGTVPKPSPPPVVASRPPHSPTGVRPPPQPLYMSSSGGSGSMYSGPETPLPPPPPPPMAFGFSKSTFTYEELAMATDGFSDANLLGQGGFGYVHRGVLPNGKEVAVKQLKAGSGQGEREFQAEVDIISRVHHKHLVSLVGYCITGSQRLLVYEFVPNNTLEFHLHGKGRPTMDWQTRLKIALGSAKGLAYIHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKFTSDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDMSNTSMEDSLVDWARPLMNRALEDGNFDALVDPRMQNNYNHNEMARMVACAAACVRHSARRRPRMSQVVRALEGDTSLSDLNEGVKPGQSTMYSSHGSSDYDTHQYNEDLRKFRKMALGSTEYGASSEYSGPTSEYGLYPSGSSSEGQTTREMEMRTAKKESGGFSGRS 673
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 2548037 2551654 - ClCG11G002450.1 Cla11g00221 284043
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00221 673 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Cla11g00221 673 MobiDBLite consensus disorder prediction 582 607 - -
Cla11g00221 673 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 62 659 - -
Cla11g00221 673 MobiDBLite consensus disorder prediction 1 155 - -
Cla11g00221 673 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 62 659 - -
Cla11g00221 673 MobiDBLite consensus disorder prediction 586 605 - -
Cla11g00221 673 SUPERFAMILY Protein kinase-like (PK-like) 278 576 IPR011009 -
Cla11g00221 673 PRINTS Proline rich extensin signature 4 20 - -
Cla11g00221 673 PRINTS Proline rich extensin signature 24 41 - -
Cla11g00221 673 PRINTS Proline rich extensin signature 49 74 - -
Cla11g00221 673 MobiDBLite consensus disorder prediction 626 673 - -
Cla11g00221 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Cla11g00221 673 ProSiteProfiles Protein kinase domain profile. 303 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00221 673 MobiDBLite consensus disorder prediction 627 655 - -
Cla11g00221 673 Gene3D Phosphorylase Kinase; domain 1 282 378 - -
Cla11g00221 673 Gene3D Transferase(Phosphotransferase) domain 1 379 589 - -
Cla11g00221 673 MobiDBLite consensus disorder prediction 187 277 - -
Cla11g00221 673 MobiDBLite consensus disorder prediction 1 142 - -
Cla11g00221 673 MobiDBLite consensus disorder prediction 222 252 - -
Cla11g00221 673 Pfam Protein tyrosine and serine/threonine kinase 308 576 IPR001245 GO:0004672|GO:0006468
Cla11g00221 673 SMART serkin_6 303 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01296 Cla-Chr7:30096135 Cla11g00221 Cla-Chr11:2548037 1.66E-94 dispersed
Cla09g02192 Cla-Chr9:39516751 Cla11g00221 Cla-Chr11:2548037 2.23E-93 dispersed
Cla11g00221 Cla-Chr11:2548037 Cla11g00502 Cla-Chr11:5689932 4.90E-143 dispersed
Cla11g01267 Cla-Chr11:26191783 Cla11g00221 Cla-Chr11:2548037 1.42E-73 dispersed
Cla01g01567 Cla-Chr1:30343680 Cla11g00221 Cla-Chr11:2548037 1.76E-72 transposed
Cla02g00030 Cla-Chr2:381979 Cla11g00221 Cla-Chr11:2548037 4.33E-72 transposed
Cla02g00209 Cla-Chr2:2179462 Cla11g00221 Cla-Chr11:2548037 6.18E-72 transposed
Cla02g01167 Cla-Chr2:25114788 Cla11g00221 Cla-Chr11:2548037 1.56E-73 transposed
Cla02g01587 Cla-Chr2:30532778 Cla11g00221 Cla-Chr11:2548037 1.24E-79 transposed
Cla02g02373 Cla-Chr2:38788822 Cla11g00221 Cla-Chr11:2548037 3.39E-73 transposed
Cla05g02542 Cla-Chr5:36770135 Cla11g00221 Cla-Chr11:2548037 4.66E-163 transposed
Cla06g00524 Cla-Chr6:6315553 Cla11g00221 Cla-Chr11:2548037 3.01E-71 transposed
Cla06g01298 Cla-Chr6:26329847 Cla11g00221 Cla-Chr11:2548037 2.84E-88 transposed
Cla06g01339 Cla-Chr6:26790441 Cla11g00221 Cla-Chr11:2548037 2.61E-78 transposed
Cla07g00865 Cla-Chr7:24038856 Cla11g00221 Cla-Chr11:2548037 0 transposed
Cla07g01184 Cla-Chr7:28822190 Cla11g00221 Cla-Chr11:2548037 4.96E-95 transposed
Cla07g01267 Cla-Chr7:29757223 Cla11g00221 Cla-Chr11:2548037 1.66E-62 transposed
Cla08g00627 Cla-Chr8:18303997 Cla11g00221 Cla-Chr11:2548037 2.10E-75 transposed
Cla10g01153 Cla-Chr10:26072586 Cla11g00221 Cla-Chr11:2548037 8.49E-57 transposed
Cla11g00221 Cla-Chr11:2548037 Cla06g00852 Cla-Chr6:12743205 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80916 PF07714 PK_Tyr_Ser-Thr 7.90E-47 CL0016 Cla PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00221 - - bhj:120079307 946.806