Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla11g00221 | ATGTCAACCCCTACTCCGGCGCCGACGTCTCCGCCGGCGACCAATACGACGTCTCCGCCGCCACCAACCCCTAGTGCTCCGCCACCATCGACTCCAACGCAACCTCCGCCGTCCACTACACCACCACCAACAACCACTCCGTCACCGCCTCCGCCTTCCGCTGCAACGCCGCCCACTCCTTCTCGGCCCCCGCCGACTTCCGCGCCACCTCCGGCCACCCCGTCACTGCCTCCACCGTCTACTCCCCAACCCGCCCCGCCCACTGCATCTCCCTCGCCGCCGGCTTCCACCCCTCCGCCGTCCAGGCCTTCGACTTCTCCACCTCCTCCGTCTTCTACTAGCCCTCCGTCTCCTCCAACTGGCCGTAGTCCGCCGCCACCAACTTCTCGTACGCCGTCCACTCCGTCAAGAAGTCCTCCACCTCCCTCAACGTCGTCGTCGTCGTCCTCCTCCTCTTCTAATATTTCAACTGGACTTGTTGTCGGAATTGCAATTGGTGGAGTGGTAATTGTTCTTCTGCTAAGTATATTGTGCCTTTGTTGTACGAAGAAAAGGAGAAGACGACGCGATGAAGAGGGATTTTATCCACACCCTCCGCCTGGCCCTAAAGTTGACCCTTATGCTGGTCAGCAGCAATGGCAGCACAATGGTCCTCTACCGCCTGATCCTTTAATCGGGACGGTGCCTAAGCCATCTCCTCCTCCGGTAGTTGCATCTCGACCCCCGCATTCTCCGACTGGCGTTCGTCCTCCACCTCAACCGCTCTATATGAGTAGCAGTGGAGGTTCGGGTTCTATGTATTCTGGGCCTGAAACGCCGCTCCCTCCGCCGCCTCCCCCTCCTATGGCCTTTGGTTTCTCAAAGAGTACTTTTACTTATGAGGAATTGGCAATGGCGACGGATGGCTTCTCGGATGCAAATCTCCTCGGACAAGGTGGATTCGGATATGTGCATAGAGGAGTTCTTCCTAATGGAAAGGAAGTTGCAGTCAAGCAGTTGAAAGCTGGGAGCGGGCAGGGCGAACGAGAATTTCAGGCCGAAGTTGATATTATCAGCCGAGTTCATCATAAACATCTTGTTTCTTTGGTTGGATATTGCATAACTGGGTCTCAAAGATTGCTTGTTTATGAGTTTGTTCCAAACAACACTTTAGAGTTCCATTTACATGGTAAAGGGCGGCCAACGATGGATTGGCAGACAAGACTTAAAATCGCATTAGGATCAGCAAAAGGACTAGCTTATATTCATGAGGATTGTCACCCGAAAATCATTCATCGCGATATTAAGGCTGCTAACATATTGTTAGATTTCAAGTTTGAAGCAAAGGTTGCTGATTTTGGACTTGCAAAGTTTACTTCTGATGTCAATACCCATGTATCAACTCGAGTGATGGGTACTTTTGGGTATCTTGCACCAGAGTATGCCTCTAGTGGCAAACTTACTGAGAAATCAGATGTTTTCTCCTTTGGGGTTATGCTTTTGGAGTTGATCACTGGTCGTCGACCAGTTGATATGAGTAATACTTCCATGGAAGATAGTCTTGTGGACTGGGCTAGACCGCTAATGAACCGAGCTTTAGAAGATGGAAACTTTGATGCTTTGGTTGATCCAAGGATGCAAAACAACTACAACCACAATGAGATGGCTCGCATGGTTGCCTGTGCTGCTGCTTGTGTTCGACATTCTGCTAGGCGTCGACCACGAATGAGTCAGGTAGTACGAGCGCTCGAAGGAGACACATCACTATCGGATCTCAACGAAGGAGTCAAACCCGGGCAGAGCACAATGTACAGTTCTCATGGAAGCTCAGATTATGACACTCACCAGTACAACGAGGACTTGAGAAAGTTCAGGAAGATGGCACTGGGAAGTACAGAATATGGAGCAAGCAGCGAATACAGCGGACCAACGAGCGAGTACGGTCTGTATCCTTCGGGATCGAGCAGCGAAGGGCAAACCACCAGAGAAATGGAGATGAGAACAGCAAAGAAAGAAAGTGGAGGCTTCAGTGGACGCTCTTGA | 2022 | 51.48 | MSTPTPAPTSPPATNTTSPPPPTPSAPPPSTPTQPPPSTTPPPTTTPSPPPPSAATPPTPSRPPPTSAPPPATPSLPPPSTPQPAPPTASPSPPASTPPPSRPSTSPPPPSSTSPPSPPTGRSPPPPTSRTPSTPSRSPPPPSTSSSSSSSSSNISTGLVVGIAIGGVVIVLLLSILCLCCTKKRRRRRDEEGFYPHPPPGPKVDPYAGQQQWQHNGPLPPDPLIGTVPKPSPPPVVASRPPHSPTGVRPPPQPLYMSSSGGSGSMYSGPETPLPPPPPPPMAFGFSKSTFTYEELAMATDGFSDANLLGQGGFGYVHRGVLPNGKEVAVKQLKAGSGQGEREFQAEVDIISRVHHKHLVSLVGYCITGSQRLLVYEFVPNNTLEFHLHGKGRPTMDWQTRLKIALGSAKGLAYIHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKFTSDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDMSNTSMEDSLVDWARPLMNRALEDGNFDALVDPRMQNNYNHNEMARMVACAAACVRHSARRRPRMSQVVRALEGDTSLSDLNEGVKPGQSTMYSSHGSSDYDTHQYNEDLRKFRKMALGSTEYGASSEYSGPTSEYGLYPSGSSSEGQTTREMEMRTAKKESGGFSGRS | 673 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 2548037 | 2551654 | - | ClCG11G002450.1 | Cla11g00221 | 284043 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla11g00221 | 673 | ProSitePatterns | Protein kinases ATP-binding region signature. | 309 | 331 | IPR017441 | GO:0005524 | |
| Cla11g00221 | 673 | MobiDBLite | consensus disorder prediction | 582 | 607 | - | - | |
| Cla11g00221 | 673 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 62 | 659 | - | - | |
| Cla11g00221 | 673 | MobiDBLite | consensus disorder prediction | 1 | 155 | - | - | |
| Cla11g00221 | 673 | PANTHER | SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED | 62 | 659 | - | - | |
| Cla11g00221 | 673 | MobiDBLite | consensus disorder prediction | 586 | 605 | - | - | |
| Cla11g00221 | 673 | SUPERFAMILY | Protein kinase-like (PK-like) | 278 | 576 | IPR011009 | - | |
| Cla11g00221 | 673 | PRINTS | Proline rich extensin signature | 4 | 20 | - | - | |
| Cla11g00221 | 673 | PRINTS | Proline rich extensin signature | 24 | 41 | - | - | |
| Cla11g00221 | 673 | PRINTS | Proline rich extensin signature | 49 | 74 | - | - | |
| Cla11g00221 | 673 | MobiDBLite | consensus disorder prediction | 626 | 673 | - | - | |
| Cla11g00221 | 673 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 423 | 435 | IPR008271 | GO:0004672|GO:0006468 | |
| Cla11g00221 | 673 | ProSiteProfiles | Protein kinase domain profile. | 303 | 582 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Cla11g00221 | 673 | MobiDBLite | consensus disorder prediction | 627 | 655 | - | - | |
| Cla11g00221 | 673 | Gene3D | Phosphorylase Kinase; domain 1 | 282 | 378 | - | - | |
| Cla11g00221 | 673 | Gene3D | Transferase(Phosphotransferase) domain 1 | 379 | 589 | - | - | |
| Cla11g00221 | 673 | MobiDBLite | consensus disorder prediction | 187 | 277 | - | - | |
| Cla11g00221 | 673 | MobiDBLite | consensus disorder prediction | 1 | 142 | - | - | |
| Cla11g00221 | 673 | MobiDBLite | consensus disorder prediction | 222 | 252 | - | - | |
| Cla11g00221 | 673 | Pfam | Protein tyrosine and serine/threonine kinase | 308 | 576 | IPR001245 | GO:0004672|GO:0006468 | |
| Cla11g00221 | 673 | SMART | serkin_6 | 303 | 539 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla07g01296 | Cla-Chr7:30096135 | Cla11g00221 | Cla-Chr11:2548037 | 1.66E-94 | dispersed | |
| Cla09g02192 | Cla-Chr9:39516751 | Cla11g00221 | Cla-Chr11:2548037 | 2.23E-93 | dispersed | |
| Cla11g00221 | Cla-Chr11:2548037 | Cla11g00502 | Cla-Chr11:5689932 | 4.90E-143 | dispersed | |
| Cla11g01267 | Cla-Chr11:26191783 | Cla11g00221 | Cla-Chr11:2548037 | 1.42E-73 | dispersed | |
| Cla01g01567 | Cla-Chr1:30343680 | Cla11g00221 | Cla-Chr11:2548037 | 1.76E-72 | transposed | |
| Cla02g00030 | Cla-Chr2:381979 | Cla11g00221 | Cla-Chr11:2548037 | 4.33E-72 | transposed | |
| Cla02g00209 | Cla-Chr2:2179462 | Cla11g00221 | Cla-Chr11:2548037 | 6.18E-72 | transposed | |
| Cla02g01167 | Cla-Chr2:25114788 | Cla11g00221 | Cla-Chr11:2548037 | 1.56E-73 | transposed | |
| Cla02g01587 | Cla-Chr2:30532778 | Cla11g00221 | Cla-Chr11:2548037 | 1.24E-79 | transposed | |
| Cla02g02373 | Cla-Chr2:38788822 | Cla11g00221 | Cla-Chr11:2548037 | 3.39E-73 | transposed | |
| Cla05g02542 | Cla-Chr5:36770135 | Cla11g00221 | Cla-Chr11:2548037 | 4.66E-163 | transposed | |
| Cla06g00524 | Cla-Chr6:6315553 | Cla11g00221 | Cla-Chr11:2548037 | 3.01E-71 | transposed | |
| Cla06g01298 | Cla-Chr6:26329847 | Cla11g00221 | Cla-Chr11:2548037 | 2.84E-88 | transposed | |
| Cla06g01339 | Cla-Chr6:26790441 | Cla11g00221 | Cla-Chr11:2548037 | 2.61E-78 | transposed | |
| Cla07g00865 | Cla-Chr7:24038856 | Cla11g00221 | Cla-Chr11:2548037 | 0 | transposed | |
| Cla07g01184 | Cla-Chr7:28822190 | Cla11g00221 | Cla-Chr11:2548037 | 4.96E-95 | transposed | |
| Cla07g01267 | Cla-Chr7:29757223 | Cla11g00221 | Cla-Chr11:2548037 | 1.66E-62 | transposed | |
| Cla08g00627 | Cla-Chr8:18303997 | Cla11g00221 | Cla-Chr11:2548037 | 2.10E-75 | transposed | |
| Cla10g01153 | Cla-Chr10:26072586 | Cla11g00221 | Cla-Chr11:2548037 | 8.49E-57 | transposed | |
| Cla11g00221 | Cla-Chr11:2548037 | Cla06g00852 | Cla-Chr6:12743205 | 0 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 80916 | PF07714 | PK_Tyr_Ser-Thr | 7.90E-47 | CL0016 | Cla | PK |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla11g00221 | - | - | bhj:120079307 | 946.806 |