Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00245 TTCCTCTTCCCCCTTCTGTTTTCTCTCTCTAAATCGACAATGGCTGCTGCAATTTCTCTTTGCTCTGTTTTTCTTCTTCTTCTTCTGACTCGGTGGGTCGACTCGGAGCCGACTCAGGATCGACAAGCCCTTCTCGATTTCTTCTCTAAAACTCCTCACGCCAATCGGGTTCAATGGAATACTTCTAATTCTGTCTGTAATTGGGTTGGCGTTGAGTGCGATTCGAATCAGTCGTTTGTTTACTCTCTTCGTTTGCCTGGTGTTGGCCTTGTCGGACCGATTCCGGCCAATACAATCGGGAAATTGACTCAGCTCCGAGTTCTCAGTCTCCGTTCCAACCGTCTCTCCGGCGAGATCCCATCGGATTTTTCCAATTTAGTAATGCTGCGGAATCTGTATCTTCAGGATAATGCTTTCGCCGGCGAGTTTCCGTCGAGTTTGACTCGTTTGACTCGGCTTACTCGGCTGGATTTGTCGTCGAACGAATTCTCCGGTCCGATTCCGCCGTCTGTTGACAATCTGACTCACTTGAGTGGGATTTTCTTGCAGAACAATGGGTTCTCCGGTTCACTCCCGAGTATCTCAGCCGTTAATTTAACAAACTTCAATGTCTCTAACAACAAACTCAACGGTTCGATTCCGAAATCATTGGCTAAATTCCCCACCTCCTCCTTCGCCGGGAACTTAGATCTCTGCGGCGGACCATTTCCACCCTGCAACCCATTCCCTCCCTCTCCATCTCCGTCACAAAACCCTTCACCAGCCCACAAAAAATCGAAGAAACTCTCCACAGCGGCGATAATCGGAATCATAATCGGCGCCGTTTTCGCAGCTTTTCTTCTCCTCCTCGTCCTCATCCTCTGCATTCGGCGGCGGTCCCGCGGACAACAGACGAAGTCAGCGAAGCCACCATCGGCGGTGGGAACGGCGGCTCGATCAATTCCAGTAGCAGAGGCCGGAACGTCGTCGTCGAAAGACGACATTACCGGAGGATCAGTGGAGGCGACGGAGAGGAACAAGCTGGTGTTCTTCGAAGGAGGGATTTACAACTTCGATTTGGAGGATTTGTTGAGAGCTTCGGCGGAGGTATTGGGGAAAGGAAGCGTGGGAACGTCGTACAAGGCGGTACTAGAAGAAGGGACGACGGTGGTGGTGAAGCGGCTGAAGGATGTGGTGGTGACGAAGAAAGAATTCGAAACTCAAATGGAAATTTTAGGGAAAATTAAACATGAAAATGTGGTTCCTCTCAGAGCATTTTACTTCTCCAAAGATGAAAAACTGCTTGTTTATGATTACATCTCCACCGGAAGTTTGTCGGCCAGCCTTCACGGAAGCAGAGGCTCCGGCAGGACGCCGTTGGACTGGGATTCAAGAATGAGAATAGCTCTAAGCGCCGGCAGGGGATTAGCGCATCTCCACCTCGCCGGCAAGGTGGTTCACGGCAACATTAAATCCTCCAACATCCTTCTCCGCCCGGATCACGACGCCTGCATCTCCGATTTCGGCCTAAACCCACTCTTCGGCACCGCCACGCCGCCGAATCGCGTCGCCGGCTACCGGGCGCCGGAGGTCGTCGAAACCCGAAAAGTCACATTCAAATCCGACGTTTACAGCTACGGCGTTCTCCTCCTTGAGCTCCTGACCGGGAAAGCCCCGAACCAGCAATCCCTCGGCGAGGAGGGAATCGACCTTCCCCGGTGGGTCCAGTCCGTCGTCCGGGAGGAATGGACGGCGGAGGTTTTCGACGCGGAGCTGATGCGGTTCCATAACATTGAAGAAGAGATGGTTCAATTACTGCAGATCGCAATGTCCTGCGTTTCGACGGTTCCCGATCAGCGGCCGGCCATGCCGGAAGTTGTACGGATGATCGAAGATATGAACAGTCATAGAAGTGAGACCGATGACGGGTTGCGCCAGTCTTCCGATGACCCTTCGAAAGGATCGGATGTGAACACGCCGCCGGCGGAATCTAGAACTCCGCCGAGAGTGACGCCGTAG 1998 52.8 FLFPLLFSLSKSTMAAAISLCSVFLLLLLTRWVDSEPTQDRQALLDFFSKTPHANRVQWNTSNSVCNWVGVECDSNQSFVYSLRLPGVGLVGPIPANTIGKLTQLRVLSLRSNRLSGEIPSDFSNLVMLRNLYLQDNAFAGEFPSSLTRLTRLTRLDLSSNEFSGPIPPSVDNLTHLSGIFLQNNGFSGSLPSISAVNLTNFNVSNNKLNGSIPKSLAKFPTSSFAGNLDLCGGPFPPCNPFPPSPSPSQNPSPAHKKSKKLSTAAIIGIIIGAVFAAFLLLLVLILCIRRRSRGQQTKSAKPPSAVGTAARSIPVAEAGTSSSKDDITGGSVEATERNKLVFFEGGIYNFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFETQMEILGKIKHENVVPLRAFYFSKDEKLLVYDYISTGSLSASLHGSRGSGRTPLDWDSRMRIALSAGRGLAHLHLAGKVVHGNIKSSNILLRPDHDACISDFGLNPLFGTATPPNRVAGYRAPEVVETRKVTFKSDVYSYGVLLLELLTGKAPNQQSLGEEGIDLPRWVQSVVREEWTAEVFDAELMRFHNIEEEMVQLLQIAMSCVSTVPDQRPAMPEVVRMIEDMNSHRSETDDGLRQSSDDPSKGSDVNTPPAESRTPPRVTP 665
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2868483 2873420 + ClCG11G002690.1 Cla11g00245 284067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00245 665 SUPERFAMILY Protein kinase-like (PK-like) 362 623 IPR011009 -
Cla11g00245 665 Pfam Leucine rich repeat N-terminal domain 38 74 IPR013210 -
Cla11g00245 665 ProSiteProfiles Protein kinase domain profile. 358 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00245 665 Gene3D Ribonuclease Inhibitor 199 239 IPR032675 -
Cla11g00245 665 MobiDBLite consensus disorder prediction 626 642 - -
Cla11g00245 665 MobiDBLite consensus disorder prediction 643 657 - -
Cla11g00245 665 Gene3D Phosphorylase Kinase; domain 1 326 432 - -
Cla11g00245 665 Pfam Leucine Rich Repeat 104 126 IPR001611 GO:0005515
Cla11g00245 665 Pfam Leucine Rich Repeat 152 174 IPR001611 GO:0005515
Cla11g00245 665 MobiDBLite consensus disorder prediction 316 330 - -
Cla11g00245 665 MobiDBLite consensus disorder prediction 626 665 - -
Cla11g00245 665 Gene3D Ribonuclease Inhibitor 37 195 IPR032675 -
Cla11g00245 665 SUPERFAMILY L domain-like 38 220 - -
Cla11g00245 665 CDD STKc_IRAK 364 626 - -
Cla11g00245 665 PANTHER RECEPTOR-LIKE KINASE 22 653 - -
Cla11g00245 665 MobiDBLite consensus disorder prediction 297 331 - -
Cla11g00245 665 PANTHER OS05G0588300 PROTEIN 22 653 - -
Cla11g00245 665 Gene3D Transferase(Phosphotransferase) domain 1 433 646 - -
Cla11g00245 665 Pfam Protein kinase domain 361 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla06g01042 Cla11g00245 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla04g00636 Cla-Chr4:20744678 Cla11g00245 Cla-Chr11:2868483 0 dispersed
Cla05g01211 Cla-Chr5:13547561 Cla11g00245 Cla-Chr11:2868483 0 dispersed
Cla11g00245 Cla-Chr11:2868483 Cla01g00205 Cla-Chr1:2033852 0 dispersed
Cla01g00851 Cla-Chr1:10404260 Cla11g00245 Cla-Chr11:2868483 4.98E-155 transposed
Cla01g01661 Cla-Chr1:31496163 Cla11g00245 Cla-Chr11:2868483 3.64E-102 transposed
Cla07g00678 Cla-Chr7:14544514 Cla11g00245 Cla-Chr11:2868483 1.77E-121 transposed
Cla11g00245 Cla-Chr11:2868483 Cla06g01042 Cla-Chr6:22563430 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80917 PF00069 Pkinase 5.00E-37 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00245 - - csv:101205802 1112.83