Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00257 ATGGTGGGTTGGATTTTTTGTTGGTTTTTGTTAGTGGTGGTTCTAAGGGCGGCGGTGGTTCTGTGGTGGCGGCCGAGAAGAATCGAAGAGCATTTTTTCCGGCAAGGAATTCGTGGCCCTCCTTATCGTTTCTTCATCGGAAATGTTAAGGAACTTGTCGGAATGATGATTAAAGCTTCTTCTGATCTTTCTTTTCCTAATTCTTCTCATAATATTCTCCCTCGTGTTCTTCCTTTTTATCATCACTGGAAGAAAATTTATGTTACTAATGATGAAATTTTTGTTTTTGTGTGTTGTGCAAAAGGGTCAAAATTTCTAGTGTGGTTTGGGCCAACGGTGAGATTGGCAGTGTCTGATCCAGACTTGATTCGAGAAATCTTCACATCAAAATCAGAATTCTGTGAGAAAAATGAACCTCACCCACTTGTTAAACAGTTAGAAGGTGATGGTCTTCTAAGTCTCAAAGGCCAAAAATGGGCTCTTCATCGCAAGATTATCTCTCCTTCTTTCCACATGGACAATCTCAAATTGTTGATTCCAGTGATGGCAAAAAGTGTCGTGGACATGTTGGAGAAATGGTCAGCATTAATGACGTCAGCAGATTCCGGTGAGATGGAAATTGAAGTTTCCGAATGGTTCCAAACCCTAACTGAAGATGTCATCACTAGGACAGCATTTGGCTCTAGCTATGAAGATGGAAAAGCCATTTTTCGCTTACAAGCCCAACAAATGGTCCTTGCTTCTCAAGCCTTTGAAAAAGTTTTCATCCCCGGCTATAGATTCCTACCTACGAGAACAAACGTGAATTCGTGGAGACTGGATAGAGAAATAAGGAAATCGTTGATGAAATTGATCGACCGACGACGGGAGAATTCGATCGAGACGAGCTCTAAGGATTTACTAGGGTTAATGATTAGGGCATCAAAGTCTTCTCCATCATCTACAATCACTGTTAATGACATTGTTGAAGAGTGCAAAGGGTTTTTCTTTGCTGGCAAACAGACCACATCCAATTTGCTGACGTGGACAATGATCCTCATGGCAATGCACCCACAATGGCAGGTACAGGCACGTGATGAGGTACTAAGGGTGTGTGGAGCACGTGACATACCCTCCAAAGATGATGTTACAAAGCTCAAAATGTTGAGTATGATCATCAATGAATCGTTACGGTTATATCCGCCGACCGTCGCAACTATTCGACAAGCGAAAGTTGACGTGGAGCTTGGTGGTTACATGATTCCACGTGGCACTGAGCTATTGATTCCGATTTTAGCTGTTCATCATGATCAAACGATATGGGGTAATGATGTGAATGAATTCAATCCAGGGCGATTTGCTGAAGGTGTTGCAAAGGCAGCCAATCATCGAGTTGGGTTCATTCCATTCGGGTTAGGAGCTCGAACTTGCATCGGCCAAAACTTGGCTATATTGCAAGCAAAATTGGCTCTTGCACTCATACTTCAAAGATTCTCTTTTCGACTGGGACCCTCTTATCAACATTCACCAGCAGTTCAAATGCTACTTTATCCACGACATGGTGCACCTATTATTTTCCAAAAATTATCCACTCCATTAATCCATCAAGATCAACAGTCATGA 1602 42.2 MVGWIFCWFLLVVVLRAAVVLWWRPRRIEEHFFRQGIRGPPYRFFIGNVKELVGMMIKASSDLSFPNSSHNILPRVLPFYHHWKKIYVTNDEIFVFVCCAKGSKFLVWFGPTVRLAVSDPDLIREIFTSKSEFCEKNEPHPLVKQLEGDGLLSLKGQKWALHRKIISPSFHMDNLKLLIPVMAKSVVDMLEKWSALMTSADSGEMEIEVSEWFQTLTEDVITRTAFGSSYEDGKAIFRLQAQQMVLASQAFEKVFIPGYRFLPTRTNVNSWRLDREIRKSLMKLIDRRRENSIETSSKDLLGLMIRASKSSPSSTITVNDIVEECKGFFFAGKQTTSNLLTWTMILMAMHPQWQVQARDEVLRVCGARDIPSKDDVTKLKMLSMIINESLRLYPPTVATIRQAKVDVELGGYMIPRGTELLIPILAVHHDQTIWGNDVNEFNPGRFAEGVAKAANHRVGFIPFGLGARTCIGQNLAILQAKLALALILQRFSFRLGPSYQHSPAVQMLLYPRHGAPIIFQKLSTPLIHQDQQS 533
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2992425 2995694 + ClCG11G002820.2 Cla11g00257 284079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00257 533 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00257 533 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00257 533 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00257 533 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00257 533 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 517 - -
Cla11g00257 533 SUPERFAMILY Cytochrome P450 74 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00257 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Cla11g00257 533 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00257 533 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00257 533 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00257 533 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00257 533 PRINTS E-class P450 group I signature 216 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00257 533 PANTHER CYTOCHROMEA2 5 517 - -
Cla11g00257 533 Pfam Cytochrome P450 74 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00257 533 Gene3D Cytochrome P450 22 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla06g01075 Cla11g00257 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g01247 Cla-Chr5:14366775 Cla11g00257 Cla-Chr11:2992425 1.24E-112 dispersed
Cla11g00257 Cla-Chr11:2992425 Cla11g01668 Cla-Chr11:30297593 1.81E-06 dispersed
Cla11g00521 Cla-Chr11:5953819 Cla11g00257 Cla-Chr11:2992425 3.12E-108 dispersed
Cla03g01462 Cla-Chr3:30146297 Cla11g00257 Cla-Chr11:2992425 2.02E-23 transposed
Cla03g01565 Cla-Chr3:31415031 Cla11g00257 Cla-Chr11:2992425 7.79E-08 transposed
Cla04g00941 Cla-Chr4:24463836 Cla11g00257 Cla-Chr11:2992425 4.54E-37 transposed
Cla05g01840 Cla-Chr5:30291502 Cla11g00257 Cla-Chr11:2992425 2.51E-30 transposed
Cla05g02382 Cla-Chr5:35369376 Cla11g00257 Cla-Chr11:2992425 3.93E-25 transposed
Cla11g01282 Cla-Chr11:26340286 Cla11g00257 Cla-Chr11:2992425 5.18E-16 transposed
Cla11g00257 Cla-Chr11:2992425 Cla06g01075 Cla-Chr6:23355972 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00257 K15639 - csv:101208789 993.03