Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla11g00263 | ATGATGGCCGGAAGCATAGGCAAAGACGAGTGGTCCGATTACGACAGTAGTTGCTCCTCCTCCGTAACCGTTCCAGACTCGAGCCGTAGCTGGATGAGCAACCTCAGCTTTGGAAGCCGGCGTCGCAGCAGTAGCTCAGCCGCAGAAGGCGGCGTGGAGATGAATAATACGACGACGACGACGACGACATTAGCATTACAAATGATGAAGCCACACAAGGCGAACGAAGTGGGATGGGAGGCCATGCGGTGGCTCCGGGGAGTGAAAGGGGAAGTGGGGTTGGAGCATTTCCGGCTGCTACGGCGGGTGGGGAGCGGAGATATTGGGAATGTTTATTTATGTGAGATAAGGAATCCAATGGTGGGGTTGCCAAAGTGCTTTTATGCAATGAAAGTGGTTGATAGAGAAGCGGTTTGTGTGAGGAATAAAGAGAGAAGGGCAGATATGGAAAAGGAAATTTTGAAAGTGCTTGATCATCCTTTTTTGCCTACTCTTTATGCGGATTTTGAAGCTTCTCATTATTCTTGTTTGCTTATGGAGTTTTGTCCTGGTGGTGATTTGTATGCTGCTCGCCAACGTCAACCCAATAAACGTTTCTCCATTTCTTCTGCTAAATTTTATGCGGCGGAGATAATTTTAGCTTTAGAGTATTTGCACATGATGGGCATAATTTACCGAGATTTAAAGCCGGAAAACGTTTTAGTTAGAGAAGATGGCCACATAATGCTCTCGGATTTCGATCTCTGCCTCAAATGCGACGTCGTTCCAAAGCTCATCCGTTGCCGGACCACCGCCTCCGACGTCACCACCGAACGCCACGTCAGATCCTACTCCACCTCAACCACCTCCTGCGCCGCCGCCCCCATTCAACCCGTCCTCTCCTGTTTCTCCATCGCCCGTCGCAAAAAATCCACCACCGTCACCACCATCACCGAACACGCCTCCGCCGCACCCGCCGCCGTGTACGGCGACGACAGCGACGGGGACGGCGAAGAATTCGACCCAGAACCAGAATTAATAGCGGAACCAATAAATGCTCGGTCGAAATCATTCGTTGGAACCCATGAGTATTTGGCGCCGGAGGTGATTTCCGGCCAAGGGCACGGCAGCGGTGTGGATTGGTGGACATTGGGAATATTCTTATACGAAATGTTGTACGGAAAGACACCATTTAAAGGGGAAAACAACGAGAAGACATTAATGAACATTTTGAAGCAGCCATTAAGGTTTCCAAGAATTGGGTTTAGTAGCAGCAAAGAGTATGAAGAAATGGTGAAAGTTGAGGATTTAATCAAGAAGCTTTTGGTGAAAAATCCCAAAAAAAGAATTGGAAGTTTAAAGGGTTCAGTTGAAATCAAAAGACATGATTTTTTCAAAGGACTGAATTGGGCTCTAATTCGATCCGTACGACCTCCACAAATCCCAAACAATAACCTTAATTACTCCAAATACCCTTCTAATTACTTACCCAAATTGAGCAAGAAACAAAGACAACAACCTTACCAAATCCCTAATCACCATTTTGATTATTTCTAA | 1536 | 46.94 | MMAGSIGKDEWSDYDSSCSSSVTVPDSSRSWMSNLSFGSRRRSSSSAAEGGVEMNNTTTTTTTLALQMMKPHKANEVGWEAMRWLRGVKGEVGLEHFRLLRRVGSGDIGNVYLCEIRNPMVGLPKCFYAMKVVDREAVCVRNKERRADMEKEILKVLDHPFLPTLYADFEASHYSCLLMEFCPGGDLYAARQRQPNKRFSISSAKFYAAEIILALEYLHMMGIIYRDLKPENVLVREDGHIMLSDFDLCLKCDVVPKLIRCRTTASDVTTERHVRSYSTSTTSCAAAPIQPVLSCFSIARRKKSTTVTTITEHASAAPAAVYGDDSDGDGEEFDPEPELIAEPINARSKSFVGTHEYLAPEVISGQGHGSGVDWWTLGIFLYEMLYGKTPFKGENNEKTLMNILKQPLRFPRIGFSSSKEYEEMVKVEDLIKKLLVKNPKKRIGSLKGSVEIKRHDFFKGLNWALIRSVRPPQIPNNNLNYSKYPSNYLPKLSKKQRQQPYQIPNHHFDYF | 511 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3058151 | 3060832 | - | ClCG11G002890.2 | Cla11g00263 | 284085 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla11g00263 | 511 | SUPERFAMILY | Protein kinase-like (PK-like) | 79 | 494 | IPR011009 | - | |
Cla11g00263 | 511 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 223 | 235 | IPR008271 | GO:0004672|GO:0006468 | |
Cla11g00263 | 511 | Gene3D | Phosphorylase Kinase; domain 1 | 95 | 185 | - | - | |
Cla11g00263 | 511 | PANTHER | PROTEIN KINASE PINOID 2 | 8 | 511 | - | - | |
Cla11g00263 | 511 | PANTHER | FLIPPASE KINASE 1-RELATED | 8 | 511 | - | - | |
Cla11g00263 | 511 | Gene3D | Transferase(Phosphotransferase) domain 1 | 346 | 476 | - | - | |
Cla11g00263 | 511 | MobiDBLite | consensus disorder prediction | 1 | 56 | - | - | |
Cla11g00263 | 511 | Pfam | Protein kinase domain | 348 | 458 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla11g00263 | 511 | Pfam | Protein kinase domain | 98 | 253 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla11g00263 | 511 | MobiDBLite | consensus disorder prediction | 12 | 56 | - | - | |
Cla11g00263 | 511 | SMART | serkin_6 | 97 | 458 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla11g00263 | 511 | CDD | STKc_phototropin_like | 96 | 475 | - | - | |
Cla11g00263 | 511 | ProSiteProfiles | Protein kinase domain profile. | 97 | 458 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla11g00263 | 511 | Gene3D | Transferase(Phosphotransferase) domain 1 | 186 | 253 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla03g00601 | Cla-Chr3:7033181 | Cla11g00263 | Cla-Chr11:3058151 | 2.76E-140 | dispersed | |
Cla07g01009 | Cla-Chr7:26461792 | Cla11g00263 | Cla-Chr11:3058151 | 2.59E-116 | dispersed | |
Cla10g01319 | Cla-Chr10:28103576 | Cla11g00263 | Cla-Chr11:3058151 | 1.15E-147 | dispersed | |
Cla11g00263 | Cla-Chr11:3058151 | Cla01g02066 | Cla-Chr1:35111622 | 1.78E-147 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80918 | PF00069 | Pkinase | 3.30E-31 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla11g00263 | K08286 | - | csv:101202905 | 856.284 |