Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00263 ATGATGGCCGGAAGCATAGGCAAAGACGAGTGGTCCGATTACGACAGTAGTTGCTCCTCCTCCGTAACCGTTCCAGACTCGAGCCGTAGCTGGATGAGCAACCTCAGCTTTGGAAGCCGGCGTCGCAGCAGTAGCTCAGCCGCAGAAGGCGGCGTGGAGATGAATAATACGACGACGACGACGACGACATTAGCATTACAAATGATGAAGCCACACAAGGCGAACGAAGTGGGATGGGAGGCCATGCGGTGGCTCCGGGGAGTGAAAGGGGAAGTGGGGTTGGAGCATTTCCGGCTGCTACGGCGGGTGGGGAGCGGAGATATTGGGAATGTTTATTTATGTGAGATAAGGAATCCAATGGTGGGGTTGCCAAAGTGCTTTTATGCAATGAAAGTGGTTGATAGAGAAGCGGTTTGTGTGAGGAATAAAGAGAGAAGGGCAGATATGGAAAAGGAAATTTTGAAAGTGCTTGATCATCCTTTTTTGCCTACTCTTTATGCGGATTTTGAAGCTTCTCATTATTCTTGTTTGCTTATGGAGTTTTGTCCTGGTGGTGATTTGTATGCTGCTCGCCAACGTCAACCCAATAAACGTTTCTCCATTTCTTCTGCTAAATTTTATGCGGCGGAGATAATTTTAGCTTTAGAGTATTTGCACATGATGGGCATAATTTACCGAGATTTAAAGCCGGAAAACGTTTTAGTTAGAGAAGATGGCCACATAATGCTCTCGGATTTCGATCTCTGCCTCAAATGCGACGTCGTTCCAAAGCTCATCCGTTGCCGGACCACCGCCTCCGACGTCACCACCGAACGCCACGTCAGATCCTACTCCACCTCAACCACCTCCTGCGCCGCCGCCCCCATTCAACCCGTCCTCTCCTGTTTCTCCATCGCCCGTCGCAAAAAATCCACCACCGTCACCACCATCACCGAACACGCCTCCGCCGCACCCGCCGCCGTGTACGGCGACGACAGCGACGGGGACGGCGAAGAATTCGACCCAGAACCAGAATTAATAGCGGAACCAATAAATGCTCGGTCGAAATCATTCGTTGGAACCCATGAGTATTTGGCGCCGGAGGTGATTTCCGGCCAAGGGCACGGCAGCGGTGTGGATTGGTGGACATTGGGAATATTCTTATACGAAATGTTGTACGGAAAGACACCATTTAAAGGGGAAAACAACGAGAAGACATTAATGAACATTTTGAAGCAGCCATTAAGGTTTCCAAGAATTGGGTTTAGTAGCAGCAAAGAGTATGAAGAAATGGTGAAAGTTGAGGATTTAATCAAGAAGCTTTTGGTGAAAAATCCCAAAAAAAGAATTGGAAGTTTAAAGGGTTCAGTTGAAATCAAAAGACATGATTTTTTCAAAGGACTGAATTGGGCTCTAATTCGATCCGTACGACCTCCACAAATCCCAAACAATAACCTTAATTACTCCAAATACCCTTCTAATTACTTACCCAAATTGAGCAAGAAACAAAGACAACAACCTTACCAAATCCCTAATCACCATTTTGATTATTTCTAA 1536 46.94 MMAGSIGKDEWSDYDSSCSSSVTVPDSSRSWMSNLSFGSRRRSSSSAAEGGVEMNNTTTTTTTLALQMMKPHKANEVGWEAMRWLRGVKGEVGLEHFRLLRRVGSGDIGNVYLCEIRNPMVGLPKCFYAMKVVDREAVCVRNKERRADMEKEILKVLDHPFLPTLYADFEASHYSCLLMEFCPGGDLYAARQRQPNKRFSISSAKFYAAEIILALEYLHMMGIIYRDLKPENVLVREDGHIMLSDFDLCLKCDVVPKLIRCRTTASDVTTERHVRSYSTSTTSCAAAPIQPVLSCFSIARRKKSTTVTTITEHASAAPAAVYGDDSDGDGEEFDPEPELIAEPINARSKSFVGTHEYLAPEVISGQGHGSGVDWWTLGIFLYEMLYGKTPFKGENNEKTLMNILKQPLRFPRIGFSSSKEYEEMVKVEDLIKKLLVKNPKKRIGSLKGSVEIKRHDFFKGLNWALIRSVRPPQIPNNNLNYSKYPSNYLPKLSKKQRQQPYQIPNHHFDYF 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3058151 3060832 - ClCG11G002890.2 Cla11g00263 284085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00263 511 SUPERFAMILY Protein kinase-like (PK-like) 79 494 IPR011009 -
Cla11g00263 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Cla11g00263 511 Gene3D Phosphorylase Kinase; domain 1 95 185 - -
Cla11g00263 511 PANTHER PROTEIN KINASE PINOID 2 8 511 - -
Cla11g00263 511 PANTHER FLIPPASE KINASE 1-RELATED 8 511 - -
Cla11g00263 511 Gene3D Transferase(Phosphotransferase) domain 1 346 476 - -
Cla11g00263 511 MobiDBLite consensus disorder prediction 1 56 - -
Cla11g00263 511 Pfam Protein kinase domain 348 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00263 511 Pfam Protein kinase domain 98 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00263 511 MobiDBLite consensus disorder prediction 12 56 - -
Cla11g00263 511 SMART serkin_6 97 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00263 511 CDD STKc_phototropin_like 96 475 - -
Cla11g00263 511 ProSiteProfiles Protein kinase domain profile. 97 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00263 511 Gene3D Transferase(Phosphotransferase) domain 1 186 253 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g00601 Cla-Chr3:7033181 Cla11g00263 Cla-Chr11:3058151 2.76E-140 dispersed
Cla07g01009 Cla-Chr7:26461792 Cla11g00263 Cla-Chr11:3058151 2.59E-116 dispersed
Cla10g01319 Cla-Chr10:28103576 Cla11g00263 Cla-Chr11:3058151 1.15E-147 dispersed
Cla11g00263 Cla-Chr11:3058151 Cla01g02066 Cla-Chr1:35111622 1.78E-147 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80918 PF00069 Pkinase 3.30E-31 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00263 K08286 - csv:101202905 856.284