Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla11g00329 | ATGTCAAACATGGGGAAACTCTTTCAAGAATGGAGACAAGCTGCAGAAGTAGAAGCAAGAAGCTCAAAAAAACAAGTCTTGATTTTGACATCAGCAGTTCAATACAAGCCAGATTTGGAAAATGGGTCATCTTTTCCAGTGGATTCCATAAGGAATAATTTGAATTGGGTAAATATTTTGGCTTATGATTATTACATGCCAAATTGGGCAAATTTTACAGCTCCTTTTGCAGCTTTATATGATCCAAAATTAGGAGCAAATACAGATAGTGGAATTGGGAAATGGATTGAAAAAGGATTACCAGCTGCTAATATTCTTTTGGCTTTACCATTTTATGGATATGCTTGGAGGCTTAAAAATGTTGAGAATTTTGGTGTTGGGGCAGCAGCAATTGGGGCAGCAATTAATAATGATGGGTCAATTAGTTATAAGAATATAAAGGAATTTATGGAGAGAAATGGGGTTGATGAAGTGAAGTTTAATGGAAGTTATGTGATGAGTTATTGTGTGGTTGGATCTACTTGGATTGCTTTTGATGATGCTGAGGTTGTTAAAATTAAGGTTTCTTATGTTAAACAAAGGAGGTTGCTTGGTTACTTTGTTTGGTTGGTGTCTTATGATGACAATTGGGAGCTCTCTTCTGTTGCAGCAAGAGAGTTTGGCAATGAGAAAGAGAAGAAGGTATCATTGCTGATAATCATCCCAAGTACAATTGGTGCAGCCATATTATTACTACTACTAGGATTTTTGTTGTTTAGAAGACTCAAATCCAAAGGAAGAAGATCAAAATTCAATGTAAAAAATCTTGTTGGTGGAGAAGATTTTGGTAGCAATGCACCTGATTTGCAAGTTTTTAGCTTTGATGAGATTGAAAAAGCTACCAATAAGTTTGCTTTCATGAATAAACTTGGACAAGGTGGTTATGGTCCTGTTTATAAGGGTATACTACCAAATGGAAAGGAGATAGCAGTGAAAAGATTGTCAGAAACTTCAGGACAGGGTTTTGAGGAGTTTAAGAATGAAGTTTTGCTCACTGCAAGATTACAACATGTCAATCTTGTGAGAGTTCTTGGATTTTGTGTTGACACTCATCAACATATGTTGGTTTATGAGTACATGCCTAACAAAAGCTTGGACTTCCACCTATTTGAAGGCCTTGGAAGAGGGAATTTGTTGAATTGGGCAAAAAGAGTGGAGATCATTGAAGGGGTAACTCAAGGACTTCTTTACCTACAAGAATACTCAAGATTGACAATCATTCATAGGGATTTGAAGCCTAGCAATATTTTGTTGGATGATGGAATGAAACCGAAAATCTCAGATTTTGGCATGGCTAGAATTTTTGCAAAAGATGAACTTGAAGCAAACACGAGTCGGATTGCGGGAACACATGGTTATATACCTCCTGAGTATGTGAGAAAAGGACTTTATTCTACGAAATCAGATGTATTTAGCTTCGGAGTTCTTCTTCTTCAAATCATAAGTGGCAAGAAGATTACTAAGTTGTATGGAGTGCATGAACATTTGAACCTTCTAGATTATTTCATTAGCATTAGCTTAAGTTGTGGAAAGCCTCCGGACTGGCAAGATTTTGTTGGAATAGTGGTGTTGCTCATTATCAACTCTACCATCAGTTTTATTGAAGAGAACAATGCAGGTAATGCAGCTGCTGCTCTAATGGCAGGACTTGCTCCAAAAACCAAGATAATTGACCTTTGTGACCTCAAAGGGGAGATAAGGAAGAAGGCTCATGATATTATCAGTAATTATGCAGATCGTGATCTTCGTTCTCTAGCCGTCGCTCGTCAGACTGTTCTAGAGAAAACCAAAGAGAGTGCTGGAGAGCCATGGGACTTTGTGGGCTTGTTGCCCCTCTTTGATCCTCCAAGGCATGATAGTGCAGAGACTATTCGTCAAGCACTCGAACTCGGGGTAAATGTTAAGATGATCACTGGAGATCAATTGGCCATTGGAAAAGAGACCGGTCGTAGGCTCGGTATGGGCACCAATATGTATCCATCATCTTCCTTACTTGGTCAAAGCAAGGATGAATCCATTGCTAGCATTCCTGTTGATGAACTTATTGAGAAGGCAGATGGGTTTGCTGGTGTCTTCCCAGAACACAAGTATGAGATAGTGAAAAAGCTCCAAGAGAGGAAACACATTTGTGGGATGACTGGTGACGGTGTTAACGATGCCCCTGCACTCAAGAAGGCCGACATTGGAATTGCTGTAGCTGATGCAACTGATGCAGCAAGGAGTGCATCAGACATTGTTTTAACAGAACCAGGTCTCAGTGTAATCGTGAGTGCAGTTCTAACAACTCTGATATGGAAGTTTGACTTCTCACCTTTCATGGTCTTGATTGTTGCCATCTTGAATGATGGAACCATCATGACCATCTCCAAGGATAGAGTGAAGCCATCTCCTATGCCTGATTCATGGAAGCTAAACGAAATTTTCGCCACCGATGTTGTTCTCGGAACGTACATGGCTATCATGACTGTGGTCTTCTTCTGGCTAACATATCAGACTGATTTCTTTCCAAAAACATTTGGGGTGAAGCAAATCAGTGAAAATCTAGCTGAGCTTAACTCTGCTCTTTACCTCCAAGTGAGCATCATTAGCCAAGCCCTCATCTTCGTGACGCGATCAAGGAGTTGGTCCTTTGTAGAGCGCCCTGGTGTTTTGCTAGTTGGAGCCTTCCTAATAGCTCAGCTGTTGGCAACCGTCATCGCCGTGTATTCCAAATGGGACTTTGCTAGAATTCATGGCATTCGTTGGGGATGGGCAGGAACTGCATTCACAACTAAGAAGGATTATGGAAAAGGAGAAAGGGAGGCACAATGGGCATCAGCACAACGTACACTTCACGGCTTACAGAAACCAGAAGCGCTATTTAACGACACGAGTAGCTACCGAGAGCTTTCCGAGATCGCAGAACAAGCAAAGAGAAGAGCTGAAGTTGCCAGTAAAACTTTGTGTTTCTTACAGGATGAGTCAGAATGTATAATTAGCACACATTTGGAAGCTCAGAAAACTCCACAAGTCAGGTTGAACCAGTAG | 3066 | 40.57 | MSNMGKLFQEWRQAAEVEARSSKKQVLILTSAVQYKPDLENGSSFPVDSIRNNLNWVNILAYDYYMPNWANFTAPFAALYDPKLGANTDSGIGKWIEKGLPAANILLALPFYGYAWRLKNVENFGVGAAAIGAAINNDGSISYKNIKEFMERNGVDEVKFNGSYVMSYCVVGSTWIAFDDAEVVKIKVSYVKQRRLLGYFVWLVSYDDNWELSSVAAREFGNEKEKKVSLLIIIPSTIGAAILLLLLGFLLFRRLKSKGRRSKFNVKNLVGGEDFGSNAPDLQVFSFDEIEKATNKFAFMNKLGQGGYGPVYKGILPNGKEIAVKRLSETSGQGFEEFKNEVLLTARLQHVNLVRVLGFCVDTHQHMLVYEYMPNKSLDFHLFEGLGRGNLLNWAKRVEIIEGVTQGLLYLQEYSRLTIIHRDLKPSNILLDDGMKPKISDFGMARIFAKDELEANTSRIAGTHGYIPPEYVRKGLYSTKSDVFSFGVLLLQIISGKKITKLYGVHEHLNLLDYFISISLSCGKPPDWQDFVGIVVLLIINSTISFIEENNAGNAAAALMAGLAPKTKIIDLCDLKGEIRKKAHDIISNYADRDLRSLAVARQTVLEKTKESAGEPWDFVGLLPLFDPPRHDSAETIRQALELGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASIPVDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTTLIWKFDFSPFMVLIVAILNDGTIMTISKDRVKPSPMPDSWKLNEIFATDVVLGTYMAIMTVVFFWLTYQTDFFPKTFGVKQISENLAELNSALYLQVSIISQALIFVTRSRSWSFVERPGVLLVGAFLIAQLLATVIAVYSKWDFARIHGIRWGWAGTAFTTKKDYGKGEREAQWASAQRTLHGLQKPEALFNDTSSYRELSEIAEQAKRRAEVASKTLCFLQDESECIISTHLEAQKTPQVRLNQ | 1021 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3739688 | 3752651 | + | ClCG11G003605.1 | Cla11g00329 | 284151 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla11g00329 | 1021 | Gene3D | - | 111 | 178 | IPR029070 | - | |
Cla11g00329 | 1021 | Coils | Coil | 973 | 993 | - | - | |
Cla11g00329 | 1021 | Gene3D | Phosphorylase Kinase; domain 1 | 273 | 372 | - | - | |
Cla11g00329 | 1021 | PRINTS | H+-transporting ATPase (proton pump) signature | 583 | 601 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla11g00329 | 1021 | PRINTS | H+-transporting ATPase (proton pump) signature | 726 | 742 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla11g00329 | 1021 | PRINTS | H+-transporting ATPase (proton pump) signature | 698 | 714 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla11g00329 | 1021 | PRINTS | H+-transporting ATPase (proton pump) signature | 757 | 782 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla11g00329 | 1021 | SUPERFAMILY | (Trans)glycosidases | 2 | 223 | IPR017853 | - | |
Cla11g00329 | 1021 | Gene3D | - | 569 | 626 | IPR023299 | GO:0000166 | |
Cla11g00329 | 1021 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 568 | 775 | - | - | |
Cla11g00329 | 1021 | SUPERFAMILY | Chitinase insertion domain | 112 | 178 | IPR029070 | - | |
Cla11g00329 | 1021 | Pfam | haloacid dehalogenase-like hydrolase | 619 | 740 | - | - | |
Cla11g00329 | 1021 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 773 | 933 | - | - | |
Cla11g00329 | 1021 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 516 | 570 | - | - | |
Cla11g00329 | 1021 | SMART | 2g34 | 1 | 207 | IPR011583 | GO:0008061 | |
Cla11g00329 | 1021 | Gene3D | Transferase(Phosphotransferase) domain 1 | 373 | 530 | - | - | |
Cla11g00329 | 1021 | SMART | serkin_6 | 297 | 587 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla11g00329 | 1021 | PRINTS | P-type cation-transporting ATPase superfamily signature | 726 | 745 | - | - | |
Cla11g00329 | 1021 | PRINTS | P-type cation-transporting ATPase superfamily signature | 643 | 653 | - | - | |
Cla11g00329 | 1021 | PRINTS | P-type cation-transporting ATPase superfamily signature | 621 | 632 | - | - | |
Cla11g00329 | 1021 | PRINTS | P-type cation-transporting ATPase superfamily signature | 749 | 761 | - | - | |
Cla11g00329 | 1021 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 933 | 1001 | - | - | |
Cla11g00329 | 1021 | ProSiteProfiles | Protein kinase domain profile. | 297 | 618 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla11g00329 | 1021 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 419 | 431 | IPR008271 | GO:0004672|GO:0006468 | |
Cla11g00329 | 1021 | Gene3D | - | 774 | 938 | - | - | |
Cla11g00329 | 1021 | Gene3D | - | 764 | 773 | - | - | |
Cla11g00329 | 1021 | Gene3D | - | 531 | 564 | - | - | |
Cla11g00329 | 1021 | SUPERFAMILY | Protein kinase-like (PK-like) | 278 | 511 | IPR011009 | - | |
Cla11g00329 | 1021 | Pfam | Glycosyl hydrolases family 18 | 2 | 207 | IPR001223 | GO:0005975 | |
Cla11g00329 | 1021 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 569 | 632 | IPR023299 | GO:0000166 | |
Cla11g00329 | 1021 | ProSiteProfiles | Glycosyl hydrolases family 18 (GH18) domain profile. | 1 | 223 | IPR001223 | GO:0005975 | |
Cla11g00329 | 1021 | Gene3D | - | 971 | 993 | - | - | |
Cla11g00329 | 1021 | Pfam | Protein kinase domain | 299 | 501 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla11g00329 | 1021 | PANTHER | PLASMA MEMBRANE ATPASE | 773 | 933 | - | - | |
Cla11g00329 | 1021 | PANTHER | PLASMA MEMBRANE ATPASE | 933 | 1001 | - | - | |
Cla11g00329 | 1021 | PANTHER | PLASMA MEMBRANE ATPASE | 516 | 570 | - | - | |
Cla11g00329 | 1021 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 768 | 934 | IPR023298 | - | |
Cla11g00329 | 1021 | SUPERFAMILY | HAD-like | 619 | 772 | IPR036412 | - | |
Cla11g00329 | 1021 | PANTHER | PLASMA MEMBRANE ATPASE | 568 | 775 | - | - | |
Cla11g00329 | 1021 | Gene3D | - | 627 | 763 | IPR023214 | - | |
Cla11g00329 | 1021 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 519 | 565 | IPR023298 | - | |
Cla11g00329 | 1021 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 701 | 773 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Cla11g00329 | 1021 | Gene3D | Glycosidases | 2 | 209 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla11g00327 | Cla-Chr11:3721123 | Cla11g00329 | Cla-Chr11:3739688 | 2.11E-28 | dispersed | |
Cla11g00329 | Cla-Chr11:3739688 | Cla11g01171 | Cla-Chr11:24491447 | 1.51E-08 | dispersed | |
Cla11g00328 | Cla-Chr11:3728561 | Cla11g00329 | Cla-Chr11:3739688 | 3.60E-37 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80920 | PF00069 | Pkinase | 6.20E-42 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla11g00329 | K01535 | - | cmax:111465441 | 848.966 |