Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00330 ATGGGGGTTTTTAGATGCTTGTGTTTCAATCTTCTTCTGTTTTTGTTGCTTTGTGTTGCGGCTTCTTCTACTGATCGTTACTCTGAAGCACTTTTAAACTTGAAATCTGAATTTGTTGATGATTTTGGGAGTTTGAGTGATTGGATTGTGGGTTCTGGAGAGAACCCATTTGGGAAAATCCATGGCTGTTCTTGGTCAGGAATCAAATGCGACAAGAATTCCACCATTGTTATTGGAATCGACCTCTCGATGAAGAAGCTTGGTGGGGAGATTTCTGGTGAGCAGTTTCATGTTTTTAAAGAGCTTGTTGATCTTAACTTAAGTCACAATTATTTGTCTGGGAAACTTCCTGTTGGAATCTTCAATCTCACTAATCTAAGAAGTTTGGATATCAGTAGGAACAATTTTTCTGGTCATTTTCCTCTTGGGATTTCTGGTCTTCAAAACTTGGTTGTTCTTGATGCTTTTAGCAATAGTTTTTCTGGGTCATTGCCTGTTGATCTTTCTGAGCTTGAAAATCTGAAGTTTCTAAACTTTGCTGGGAGTTACTTCAAAGGGCCAATCCCTTCAGAATATGGTTCTTTCAAAAAACTTGAGTTCATTCATCTTGCTGGGAATTTTCTTAGTGGAAACTTACCTCCTGAATTGGGCAAACTCAAAACTGTAACTCATATGGAGATTGGCTACAATAGTTTCCAGGGAAATCTCCCATGGGAATTAGGCAACATGAGTAACCTTCAATATCTTGATATTGCAAGTGGAAATCTCTCTGGTTCAATTCCTAAAGAATTTAGTAATCTCACAAAGCTTGAGTCTCTTTTCCTTTTCAGAAACCAGCTATCCGGGTTCTTGCCTGAGGAACTAAGCAATATCACTTCTCTTGTTAATTTAGATCTTTCTGATAACCATATTTCTGGTCCTATTCCAGAGAGCTTTTCAGAGTTGAAGAATCTTAGACTGCTCAGTGTTATGTACAATGAAATGACTGGTTCTGTTCCAAAAGGCATTGGAGAGCTTCCTTCATTGGAGACTCTTCTTATATGGAGCAATCAGTTTTCTGGGTCACTCCCAAACAACTTGGGTAGCAACAAAAAGCTTAAATGGGTTGATGTTTCCACAAACAATTTTGTGGGTGTCATCCCACCAAATATCTGCCAAGGAGGTTTACTTTATAAGTTGATCCTGTTTTCAAATAAGTTTAGTGGTGGACTTTCCCCATCCCTCTCTAATTGTTCTTCCCTTGTTCGATTGCGGCTAGAGGATAATACGTTTTCAGGTGATATTGCTCTGAAATTTAGTGATCTTCCTGATATCTCATACATAGATATCTCTAGAAACAATTTCAGTGGTGGAGTTCCTTTAGATTTAAACAAAGCATCCAACCTTCAATACTTGAATATCTCTCATAACCCACAACTGGGAGGTGTTTTTCCTGCAGAAACATGGACTTTACCCCTTCTTCAAAACTTTTCAGCCTCTGATTGTGGCATAAGAGGAAACCTTCCCAACTTCCAGCTCTGCAAATCCATTTCTACTATTGAATTGAATAATAACGAACTATCAGGTAAAGTCCCAGAAAGCATTGCAAGTTGTCAGGCTCTTGTAAGGATGGATTTGTCTTACAACAATCTCTCAGGTCATATACCCGAAGAACTTGCACATCTTCCTTCTATTAGCATCCTTGATCTATCTCACAATGGTTTCAATGGAACGATACCTGAAAAGTTCAGGGATTCGTCGAGCTTGCTTCTACTAAATGTGTCTTCCAATGATATCTCTGGTTCCATCCCGGAAAAAGAAGTGTTTCGATCAATGGGCAGCAGTGCTTTTGCTGGAAATCCAAAGCTATGTGGAGCACCTTTGAGACCATGTTCAGGTTCATTGGCAATGCTTGGAGGCAAAGGGATGGGGAAGCTTATACTCATCCTGATACTATGTGCAGGTCTTGCTATAATCACGACGATATCAATTGTGTGGCTTTTCTTCGTCCGAAGAGGGAGCAAAGGTAAATGGAAGATGGTTTCATTCACCGGACTTCCTCCATTCACAGCTAATGATATTCTCAGGAGTTTCGACTCTACGGAATCTAAGGAAGCGATATTGCCATTGTCTGCTTCGATTTTCAAAGCAGTTCTGCCCACTGGAATCACGGTGTCGATAAAGAAGATAGACTGGGAAGCAAAAAGAATGAAGACGATATCGGAGTTTATAACTCAATTAGGTAGTTTGAGGCACAAGAATTTGGTCAGATTGCTGGGATTCTGCCACAACAAACAGATGGTTTATCTTTTGTATGATTACTTGCCCAATGGAAATCTAGCAGAGAAAATTTCAATGAAAAGGGAATGGCCAACTAAACTCAAACTCATTATAGGTATAGCAAGGGGAATACACTTCCTTCACCATGACTGTTATCCTCCAATTCCCCATGGAGACTTGAAGTCAAGTAACATCATTTTCGACGAAAATATGGAACCCCGTCTGGCTGAATTCGGACTCCGGTTTCTACAACAACTAAACGAAGATCCGCTTCCATTATCGTCTACAACGAAAGAAGGAGATAAATTCAATAATGCAACAGAGGAGGAGCTGTGGATGGATGTTCATAGTTTTGGGGAGATCATCCTGGAAATTATAAGCAACGGTCGATTAACGACCGCTGGATCGAGCACACAGAACAAGGCAAGAGATCTTCTGTTAAGAGAAATATACAAAGAAAATGGGATTAGGTCTCCCAATTCATCACAAGAGGAGATAAAACAGGTTCTTGATCTAGCTTTGCTATGCACAAGGAGCAGGCCATCCAACAGACCATCCATGGAAGATATCTTAAAGCTGTTATCAGAAATAAAACCAGAGAGGAAGAACCCTAATCGACACGCAGAAATGTCGGGCTGGGATGAAGGAGGAATCTACTACAGCGACCAAGCGCAGTCCCTTGGTGACGGAACCGGCATCGGCCGAAGCGGAGATGCCGACGACAAGGCCACTCATCACTCGGTCCTTCGCAAATTCAAGGAGTTCATCCGTGGATTTGAAGCCGACAAGAATGTTTTCCCTTACAGAGAGAGCCTTCTCCACAATCCCAAGTTTCTTCGCGTTGATATGGAGGACGTTAACGCTTTTGACTCCGATCTTCCGGCGAAGCTTCGATCTGCTCCTGCCGATTTCTTGCCCTTGTTTGAGACTGCTGCAGGGGAGGTTTTAATGAATCTGAAGACGAAGGTGGCTGGTGAGACTGGAGAAATGGTGGAGCCCGTGCCTGGGGATGTTCAAATTCTGCTAACGTCGAAGGAGGATCCCGTCTCAATGCGGTCCCTTGGGGCACAGTACATTTCAAAACTTGTTAAAATATCTGGAATCACAATAGCTGCGTCAAGGACCAAGGCAAAGGCAACATATGTGACCTTAATTTGTAAAAACTGTAGAAGTACAACACGAGTTCCGTGTCGGCCAGGACTTGGAGGTGCAATTGTCCCTCGGTCATGTAATCATATTCCTCAGGCGGGAGAAGAACCATGCCCACTGGACCCCTGGATTGTGGTTCCTGACAAAAGTATGTATGTTGATCAACAGACTCTAAAACTGCAGGAAAACCCAGAAGATGTCCCAACTGGGGAACTTCCTAGGAACATGCTTCTATCAGTAGATCGCCATCTTGTCCAAACAATTGTCCCAGGCACTAGATTGACCATCATGGGGATATACAGTATCTACCAAGCTGCCAATTCTTCTGCATCCCACAAAGGAGCAGTTGCAATCAGGCAGCCTTATATCAGGGTTGTAGGCATTGAAGAATGTAATGAAGCTAACTCTCGGGGCCCTGCATCCTTCACAACAGAAGATATAGAAGAGTTCAAAAAATTTGCAGCAGAGCCTGATGTCTATAAAAGCATATGTTCAAAGATTGCCCCCTCTATATTTGGTCATGATGATGTGAAGAAGGCCGTGGCTTGTCTTCTATTTGGAGGATCCAGGAAGAATTTGCCAGATGGGGTTAAGTTAAGAGGTGACATTAATGTATTGCTCTTGGGGGACCCGTCTACAGCTAAATCCCAGTTTCTCAAGTTTGTTGAGAAAACAGCTCCAGTTGCTGTTTATACTTCTGGAAAAGGTTCATCGGCTGCTGGTCTCACAGCTTCAGTGATACGAGATAGCAGCTCCCGAGAGTTTTATCTTGAAGGAGGTGCAATGGTTTTGGCTGATGGAGGTGTTGTCTGCATTGATGAGTTTGACAAAATGAGATCAGAGGATAGAGTTGCTATTCATGAAGCAATGGAACAACAGACAATATCAATTGCCAAAGCCGGAATTACAACGGTTCTTAATTCCAGAACCTCAGTGCTTGCTGCTGCTAATCCTCCATCGGGACGTTATGATGATCTTAAGACAGCACAGGATAACATCGATTTGCAGACAACAATTCTCTCCAGATTTGATTTAATTTTCATCGTTAAAGATATAAGGATGTACAGTCAAGATAAGATTATAGCAAGCCACATAATAAAAGTTCATGCATCTGCTGATGCAACCTTGGGTGAACATAGAGCTTCTAAAGAAGAGAATTGGCTAAAGAGGTATATTCAATATTGTCGAACTCAATGTTATCCCCGTTTGTCAGAATCTGCATCTATAATGCTGCAGAATAACTATGTTAAAATCAGACAGGACATGAGACAACAAGCAAACGAAACAGGGGAGGCTGCTGCAATTCCAATTACTGTAAGGCAGCTGGAAGCTATTGTAAGATTAAGCGAGGCACTTGCAAAAATGAAGTTGTCCCACGTTGCCACTGAGGAAAATGTGCAGGAAGCTATTAGACTTTTTACTGTGTCGACGATGGACGCAGCACGCTCTGGGATTCATCAGCAAGTAAATCTGACTCCTGAAATTGCTAATGAAATAAAGCAAGCAGAAACACAGATAAAGAGAAGAATAGGAATTGGCAACCACATATCTGAGAGAAGGCTGATTGACGAGCTCACCAAAATGGGGATGAACGAGTCAATTGTGAGAAGAGCTCTGATTATTATGCACCAGAGAGATGAAGTTGAATATAAAAGAGAAAGGCGTGTCATTTTTCGCAAGGCATGA 5094 41.95 MGVFRCLCFNLLLFLLLCVAASSTDRYSEALLNLKSEFVDDFGSLSDWIVGSGENPFGKIHGCSWSGIKCDKNSTIVIGIDLSMKKLGGEISGEQFHVFKELVDLNLSHNYLSGKLPVGIFNLTNLRSLDISRNNFSGHFPLGISGLQNLVVLDAFSNSFSGSLPVDLSELENLKFLNFAGSYFKGPIPSEYGSFKKLEFIHLAGNFLSGNLPPELGKLKTVTHMEIGYNSFQGNLPWELGNMSNLQYLDIASGNLSGSIPKEFSNLTKLESLFLFRNQLSGFLPEELSNITSLVNLDLSDNHISGPIPESFSELKNLRLLSVMYNEMTGSVPKGIGELPSLETLLIWSNQFSGSLPNNLGSNKKLKWVDVSTNNFVGVIPPNICQGGLLYKLILFSNKFSGGLSPSLSNCSSLVRLRLEDNTFSGDIALKFSDLPDISYIDISRNNFSGGVPLDLNKASNLQYLNISHNPQLGGVFPAETWTLPLLQNFSASDCGIRGNLPNFQLCKSISTIELNNNELSGKVPESIASCQALVRMDLSYNNLSGHIPEELAHLPSISILDLSHNGFNGTIPEKFRDSSSLLLLNVSSNDISGSIPEKEVFRSMGSSAFAGNPKLCGAPLRPCSGSLAMLGGKGMGKLILILILCAGLAIITTISIVWLFFVRRGSKGKWKMVSFTGLPPFTANDILRSFDSTESKEAILPLSASIFKAVLPTGITVSIKKIDWEAKRMKTISEFITQLGSLRHKNLVRLLGFCHNKQMVYLLYDYLPNGNLAEKISMKREWPTKLKLIIGIARGIHFLHHDCYPPIPHGDLKSSNIIFDENMEPRLAEFGLRFLQQLNEDPLPLSSTTKEGDKFNNATEEELWMDVHSFGEIILEIISNGRLTTAGSSTQNKARDLLLREIYKENGIRSPNSSQEEIKQVLDLALLCTRSRPSNRPSMEDILKLLSEIKPERKNPNRHAEMSGWDEGGIYYSDQAQSLGDGTGIGRSGDADDKATHHSVLRKFKEFIRGFEADKNVFPYRESLLHNPKFLRVDMEDVNAFDSDLPAKLRSAPADFLPLFETAAGEVLMNLKTKVAGETGEMVEPVPGDVQILLTSKEDPVSMRSLGAQYISKLVKISGITIAASRTKAKATYVTLICKNCRSTTRVPCRPGLGGAIVPRSCNHIPQAGEEPCPLDPWIVVPDKSMYVDQQTLKLQENPEDVPTGELPRNMLLSVDRHLVQTIVPGTRLTIMGIYSIYQAANSSASHKGAVAIRQPYIRVVGIEECNEANSRGPASFTTEDIEEFKKFAAEPDVYKSICSKIAPSIFGHDDVKKAVACLLFGGSRKNLPDGVKLRGDINVLLLGDPSTAKSQFLKFVEKTAPVAVYTSGKGSSAAGLTASVIRDSSSREFYLEGGAMVLADGGVVCIDEFDKMRSEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPPSGRYDDLKTAQDNIDLQTTILSRFDLIFIVKDIRMYSQDKIIASHIIKVHASADATLGEHRASKEENWLKRYIQYCRTQCYPRLSESASIMLQNNYVKIRQDMRQQANETGEAAAIPITVRQLEAIVRLSEALAKMKLSHVATEENVQEAIRLFTVSTMDAARSGIHQQVNLTPEIANEIKQAETQIKRRIGIGNHISERRLIDELTKMGMNESIVRRALIIMHQRDEVEYKRERRVIFRKA 1697
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3754092 3764402 - ClCG11G003620.1 Cla11g00330 284152

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00330 1697 ProSiteProfiles Protein kinase domain profile. 671 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00330 1697 SUPERFAMILY RNI-like 80 426 - -
Cla11g00330 1697 Gene3D Phosphorylase Kinase; domain 1 690 767 - -
Cla11g00330 1697 Pfam MCM N-terminal domain 1003 1074 IPR027925 -
Cla11g00330 1697 Pfam Protein tyrosine and serine/threonine kinase 714 946 IPR001245 GO:0004672|GO:0006468
Cla11g00330 1697 SUPERFAMILY L domain-like 380 624 - -
Cla11g00330 1697 Pfam MCM P-loop domain 1282 1505 IPR001208 GO:0003677|GO:0005524|GO:0032508
Cla11g00330 1697 Gene3D Ribonuclease Inhibitor 184 282 IPR032675 -
Cla11g00330 1697 Gene3D Ribonuclease Inhibitor 283 388 IPR032675 -
Cla11g00330 1697 PRINTS Mini-chromosome maintenance (MCM) protein family signature 1336 1351 IPR001208 GO:0003677|GO:0005524|GO:0032508
Cla11g00330 1697 PRINTS Mini-chromosome maintenance (MCM) protein family signature 1475 1483 IPR001208 GO:0003677|GO:0005524|GO:0032508
Cla11g00330 1697 PRINTS Mini-chromosome maintenance (MCM) protein family signature 1396 1410 IPR001208 GO:0003677|GO:0005524|GO:0032508
Cla11g00330 1697 PRINTS Mini-chromosome maintenance (MCM) protein family signature 1424 1437 IPR001208 GO:0003677|GO:0005524|GO:0032508
Cla11g00330 1697 PRINTS Mini-chromosome maintenance (MCM) protein family signature 1448 1460 IPR001208 GO:0003677|GO:0005524|GO:0032508
Cla11g00330 1697 Gene3D - 1276 1630 IPR027417 -
Cla11g00330 1697 Gene3D Transferase(Phosphotransferase) domain 1 768 965 - -
Cla11g00330 1697 Pfam Leucine rich repeat 510 567 IPR001611 GO:0005515
Cla11g00330 1697 Pfam Leucine rich repeat 244 304 IPR001611 GO:0005515
Cla11g00330 1697 Gene3D Ribonuclease Inhibitor 24 183 IPR032675 -
Cla11g00330 1697 SMART mcm 1100 1614 IPR031327 GO:0003677|GO:0005524|GO:0032508
Cla11g00330 1697 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Cla11g00330 1697 SUPERFAMILY Nucleic acid-binding proteins 1004 1261 IPR012340 -
Cla11g00330 1697 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 2 954 - -
Cla11g00330 1697 SMART serkin_6 697 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00330 1697 Gene3D Ribonuclease Inhibitor 389 627 IPR032675 -
Cla11g00330 1697 Gene3D - 1104 1239 IPR012340 -
Cla11g00330 1697 Gene3D - 993 1084 - -
Cla11g00330 1697 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1305 1613 IPR027417 -
Cla11g00330 1697 SMART LRR_typ_2 267 290 IPR003591 -
Cla11g00330 1697 SMART LRR_typ_2 123 147 IPR003591 -
Cla11g00330 1697 SMART LRR_typ_2 339 363 IPR003591 -
Cla11g00330 1697 SMART LRR_typ_2 291 314 IPR003591 -
Cla11g00330 1697 SMART LRR_typ_2 555 578 IPR003591 -
Cla11g00330 1697 PANTHER UNNAMED PRODUCT 2 954 - -
Cla11g00330 1697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672|GO:0006468
Cla11g00330 1697 Gene3D - 1131 1189 - -
Cla11g00330 1697 SUPERFAMILY Protein kinase-like (PK-like) 705 947 IPR011009 -
Cla11g00330 1697 ProSiteProfiles MCM family domain profile. 1295 1501 IPR001208 GO:0003677|GO:0005524|GO:0032508
Cla11g00330 1697 Pfam MCM AAA-lid domain 1523 1612 IPR041562 -
Cla11g00330 1697 Pfam MCM OB domain 1104 1239 IPR033762 -
Cla11g00330 1697 ProSitePatterns MCM family signature. 1404 1412 IPR018525 GO:0003677|GO:0005524|GO:0006260
Cla11g00330 1697 CDD MCM5 1299 1612 - -
Cla11g00330 1697 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 1531 1546 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Cla11g00330 1697 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 1607 1624 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Cla11g00330 1697 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 1255 1267 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Cla11g00330 1697 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 1131 1143 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Cla11g00330 1697 PRINTS Mini-chromosome maintenance (MCM) protein 5 signature 1105 1120 IPR008048 GO:0003688|GO:0005524|GO:0005634|GO:0006270|GO:0042555
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00330 - - K02209 csv:101212061 1714.12
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01604 Cla-Chr7:33359458 Cla11g00330 Cla-Chr11:3754092 0 dispersed
Cla10g01241 Cla-Chr10:27181452 Cla11g00330 Cla-Chr11:3754092 2.14E-100 dispersed
Cla10g01954 Cla-Chr10:35371168 Cla11g00330 Cla-Chr11:3754092 3.96E-76 dispersed
Cla11g00330 Cla-Chr11:3754092 Cla10g00776 Cla-Chr10:14753611 6.34E-156 dispersed
Cla11g00330 Cla-Chr11:3754092 Cla01g01760 Cla-Chr1:32501800 1.56E-153 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi11g613 . . . . Bpe01g00814 . . . . . . . . . . . . . . . . . . . Cla11g00330 . . . . . . Cone2ag0557 Cone16ag0446 . . . Csa02g00251 Chy05g01255 . . . . . . . . . . . . . . . . . Cpe07g01135 . . . . . . . . . . . . . . . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cla08g00013 . 1 94 Core DNA Replication Machinery Family AT4G14700 75.5 1.5e-37 155.2
Cla08g00013 . 1 94 Core DNA Replication Machinery Family AT4G12620 78.7 2.4e-38 157.9
Cla08g01551 . 2 390 Core DNA Replication Machinery Family AT2G37560 60.7 1.9e-138 489.2
Cla07g00440 . 9 451 Core DNA Replication Machinery Family AT2G01120 55.2 2.0e-129 459.5
Cla06g00340 . 89 622 Core DNA Replication Machinery Family AT4G29910 58.2 9.2e-175 610.5
Cla11g00892 . 1 283 Core DNA Replication Machinery Family AT1G26840 66.1 4.0e-94 341.7
Cla09g02206 . 68 839 Core DNA Replication Machinery Family AT1G79150 57.7 1.4e-235 813.1
Cla10g01241 . 8 946 Core DNA Replication Machinery Family AT1G44900 75.0 0.0e+00 1346.6
Cla01g02393 . 83 595 Core DNA Replication Machinery Family AT5G46280 84.1 1.5e-249 859.0
Cla02g00495 . 1 845 Core DNA Replication Machinery Family AT2G16440 76.2 0.0e+00 1153.7
Cla11g00330 . 963 1697 Core DNA Replication Machinery Family AT2G07690 78.4 0.0e+00 1112.4
Cla01g02533 . 7 869 Core DNA Replication Machinery Family AT5G44635 65.0 0.0e+00 1080.1
Cla09g00472 . 45 763 Core DNA Replication Machinery Family AT4G02060 85.3 0.0e+00 1219.9
Cla02g01918 . 55 521 Core DNA Replication Machinery Family AT2G29680 61.9 5.6e-163 571.2
Cla02g01918 . 37 482 Core DNA Replication Machinery Family AT1G07270 58.8 2.7e-143 505.8
Cla09g00820 . 323 915 Core DNA Replication Machinery Family AT3G25100 76.2 1.2e-257 885.9
Cla10g01954 . 12 826 Core DNA Replication Machinery Family AT3G09660 69.0 2.4e-309 1058.1
Cla09g01540 . 9 635 Core DNA Replication Machinery Family AT2G14050 79.5 4.4e-290 993.8
Cla09g01539 . 19 120 Core DNA Replication Machinery Family AT2G14050 74.5 2.6e-40 164.1
Cla02g01165 . 1909 2314 Core DNA Replication Machinery Family AT2G20980 51.4 6.2e-101 364.8
Cla09g00243 CCT,ECH 1 192 Core DNA Replication Machinery Family AT1G80190 67.5 1.1e-72 270.0
Cla11g00591 . 1 184 Core DNA Replication Machinery Family AT1G19080 68.5 2.0e-70 262.3
Cla11g00591 . 1 184 Core DNA Replication Machinery Family AT3G55490 68.5 2.0e-70 262.3
Cla05g00156 . 15 164 Core DNA Replication Machinery Family AT5G49010 65.3 1.6e-49 193.0
Cla02g01214 . 1 1546 Core DNA Replication Machinery Family AT5G67100 60.7 0.0e+00 1769.2
Cla04g01144 . 99 694 Core DNA Replication Machinery Family AT1G67630 54.7 5.5e-189 657.9
Cla06g00192 . 363 763 Core DNA Replication Machinery Family AT1G67320 65.3 3.5e-170 595.1
Cla08g00153 . 7 430 Core DNA Replication Machinery Family AT5G41880 65.5 1.6e-169 592.8
Cla01g01486 . 1 1033 Core DNA Replication Machinery Family AT5G63960 78.5 0.0e+00 1643.6
Cla10g01668 . 29 575 Core DNA Replication Machinery Family AT2G42120 60.5 4.1e-186 647.9
Cla06g00192 . 363 763 Core DNA Replication Machinery Family AT1G67320 65.3 3.5e-170 595.1
Cla01g00535 . 1 127 Core DNA Replication Machinery Family AT1G09815 60.8 3.4e-37 151.4
Cla02g02143 . 1 2095 Core DNA Replication Machinery Family AT1G08260 71.5 0.0e+00 2981.8
Cla09g02001 . 1 1737 Core DNA Replication Machinery Family AT1G08260 66.5 0.0e+00 2332.4
Cla02g02143 . 25 2202 Core DNA Replication Machinery Family AT2G27120 68.1 0.0e+00 2948.3
Cla09g02001 . 1 1844 Core DNA Replication Machinery Family AT2G27120 64.0 0.0e+00 2351.2
Cla04g01237 . 530 980 Core DNA Replication Machinery Family AT5G22110 69.8 1.1e-182 636.7
Cla02g02185 . 228 973 Core DNA Replication Machinery Family AT5G22010 72.2 1.6e-301 1032.3
Cla10g00332 . 1 203 Core DNA Replication Machinery Family AT1G63160 91.6 2.0e-105 379.4
Cla04g00481 . 73 444 Core DNA Replication Machinery Family AT5G27740 76.3 1.1e-162 569.7
Cla11g01553 . 1 334 Core DNA Replication Machinery Family AT1G21690 82.1 4.5e-153 537.7
Cla08g00608 . 1 412 Core DNA Replication Machinery Family AT1G77470 66.4 5.3e-147 517.7
Cla11g00142 . 26 587 Core DNA Replication Machinery Family AT2G06510 67.7 8.4e-238 820.1
Cla10g00108 . 32 703 Core DNA Replication Machinery Family AT2G06510 50.4 1.0e-195 680.2
Cla06g01537 . 1 643 Core DNA Replication Machinery Family AT5G08020 66.1 4.1e-245 844.3
Cla10g00108 . 10 811 Core DNA Replication Machinery Family AT5G45400 50.3 1.8e-227 786.2
Cla06g01537 . 1 638 Core DNA Replication Machinery Family AT5G61000 64.0 3.2e-237 818.1
Cla10g00108 . 5 797 Core DNA Replication Machinery Family AT4G19130 53.7 3.0e-224 775.4
Cla03g01715 . 1 386 Core DNA Replication Machinery Family AT5G26680 78.5 4.7e-176 614.4
Cla07g01491 . 1 328 Core DNA Replication Machinery Family AT2G25100 60.7 1.0e-110 396.7
Cla02g02101 . 44 890 Core DNA Replication Machinery Family AT1G08130 62.1 7.1e-282 966.8
Cla02g02101 . 204 890 Core DNA Replication Machinery Family AT1G49250 60.3 9.2e-227 783.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0011422 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 1 1 1 1 31
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80921 PF07714 PK_Tyr_Ser-Thr 1.60E-22 CL0016 Cla PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cla11g00330 Cla_Chr11 FPKM 60.45496 57.247597 99.817574 104.79612 60.854027 80.93441 60.671879 120.906242 139.414215 128.983994