Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla11g00377 | ATGAAGATCCGTTGTGATGTTTGCGAGAAAGAAGAAGCCTCTGTTTTTTGCCCCTCCGACGAAGCGGCCCTCTGTGCCGCCTGTGACCGCCACGTCCACCGCGCCAACAAGCTCGCCGAGAAACACAACCGTTTCTCTCTCCTCCAATCCACCGCCGCCGCTGCCAATTCACTGCCGTTGTGCGATATCTGCCAGGTCCGGCGAGCGTTTCTGTTCTGTCGCGAAGACAGAGCAATCCTCTGTAGAGAATGCGACATTCCAATTCACATCACCAACGATCGAACCCAGAAGCACACCCGGTTTCTTCTCACCGGCGTGAAGGTCTCGCCGTCGCCGTTGGCTTCTTCTACTTCCTCATCCTCCGTCTCAGGCGGCGGCGAAGAAATTGAAGGCGAAATTGGGTTGTTCAAGAGACGCTCGAGGAAGAGGGCTAAAATGGAGGAATTAGAGAAGCCATTGAATGTTGAAGAAAATGGGGTATCAATAAGCAGTATTTGGGAGTATTTGGAGAGTTTGCCTGGTTGGTGCGTGGAGGAGTTTCTTGATTCTTCATCTACTGCTGATATTTTTCTGTAA | 576 | 51.74 | MKIRCDVCEKEEASVFCPSDEAALCAACDRHVHRANKLAEKHNRFSLLQSTAAAANSLPLCDICQVRRAFLFCREDRAILCRECDIPIHITNDRTQKHTRFLLTGVKVSPSPLASSTSSSSVSGGGEEIEGEIGLFKRRSRKRAKMEELEKPLNVEENGVSISSIWEYLESLPGWCVEEFLDSSSTADIFL | 191 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4256371 | 4256946 | - | ClCG11G004010.1 | Cla11g00377 | 284199 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla11g00377 | 191 | Gene3D | Classic Zinc Finger | 1 | 102 | - | - | |
Cla11g00377 | 191 | ProSiteProfiles | Zinc finger B-box type profile. | 56 | 103 | IPR000315 | GO:0008270 | |
Cla11g00377 | 191 | PANTHER | B-BOX ZINC FINGER PROTEIN 22 | 1 | 187 | - | - | |
Cla11g00377 | 191 | SMART | bboxneu5 | 4 | 47 | IPR000315 | GO:0008270 | |
Cla11g00377 | 191 | SMART | bboxneu5 | 56 | 103 | IPR000315 | GO:0008270 | |
Cla11g00377 | 191 | CDD | Bbox1_BBX-like | 5 | 47 | - | - | |
Cla11g00377 | 191 | ProSiteProfiles | Zinc finger B-box type profile. | 1 | 47 | IPR000315 | GO:0008270 | |
Cla11g00377 | 191 | Pfam | B-box zinc finger | 58 | 99 | IPR000315 | GO:0008270 | |
Cla11g00377 | 191 | Pfam | B-box zinc finger | 3 | 44 | IPR000315 | GO:0008270 | |
Cla11g00377 | 191 | PANTHER | B-BOX ZINC FINGER PROTEIN 21 | 1 | 187 | - | - | |
Cla11g00377 | 191 | CDD | Bbox1_BBX-like | 60 | 103 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla08g01445 | Cla11g00377 | CCT | |
Cla08g01445 | Cla11g00377 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla07g00964 | Cla-Chr7:25824123 | Cla11g00377 | Cla-Chr11:4256371 | 1.51E-36 | dispersed | |
Cla09g01311 | Cla-Chr9:20498015 | Cla11g00377 | Cla-Chr11:4256371 | 6.73E-48 | dispersed | |
Cla11g00377 | Cla-Chr11:4256371 | Cla08g01382 | Cla-Chr8:26678492 | 7.80E-06 | dispersed | |
Cla11g00377 | Cla-Chr11:4256371 | Cla02g00492 | Cla-Chr2:4855440 | 9.25E-63 | wgd | |
Cla11g00377 | Cla-Chr11:4256371 | Cla08g01445 | Cla-Chr8:27322483 | 2.09E-47 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62005 | PF00643 | zf-B_box | 1.60E-06 | No_clan | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla11g00377 | - | - | bhj:120089126 | 283.108 |