Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla11g00380 | ATGCTGACGAAGTTTGAAACCAAGAGTAATAGAGTCAAAGGGTTGAGTTTCCACAGTAAGAGGCCATGGATCCTTGCAAGTCTTCACAGCGGAGTGATCCAGCTATGGGACTACCGGATGGGCACACTTATTGATAGATTTGATGAGCATGAGGGGCCTGTTCGTGGTGTTCACTTTCACAAGTCTCAGCCTCTTTTTGTGTCTGGAGTGTGCCCATCCGGTAGTCTTCACAGCGGAGTGATCCAGCTATGGGACTACCGGATGGGCACACTTACTGATAGATTTGATGAGCATGAGGGGCCTGTTCGTGGTGTTCACTTTCACAAGTCTCAGCTTCTTTTTGTGTCTGGAGTGTGCCCATCCGGTAGTCTTCACAGCGGAGTGATCCAGCTATGGGACTACCGGATGGGCACACTTACTGATAGATTTGATGAGCATGAGGGGCCTGTTCGTGGTGTTCACTTTCACAAGTCTCAGCTTCTTTTTGTGTCTGGAGTGTGCCCATCCGGTAGTCTTCACAGCGGAGTGATCCAGCTATGGGACTACCGGATGGGCACACTTACTGATAGATTTGATGAGCATGAGGGGCCTGTTCGTGGTGTTCACTTTCACAAGTCTCAGCTTCTTTTTGTGTCTGGAGTGTGCCCATCCGGTAGTCTTCACAGCGGAGTGATCCAGCTATGGGACTACCGGATGGGCACACTTACTGATAGATTTGATGAGCATGAGGGGCCTGTTCGTGGTGTTCACTTTCACAAGTCTCAGCTTCTTTTTGTGTCTGGAGTGTGCCCATCCGGTAGTCTTCACAGCGGAGTGATCCAGCTATGGGACTACCGGATGGGCACACTTACTGATAGATTTGATGAGCATGAGGGGCCTGTTCGTGGTGTTCACTTTCACAAGTCTCAGCTTCTTTTTGTGTCTGGAGTGTGCCCATCCGGTAGTCTTCACAGCGGAGTGATCCAGCTATGGGACTACCGGATGGGCACACTTACTGATAGATTTGATGAGCATGAGGGGCCTGTTCGTGGTGTTCACTTTCACAAGTCTCAGCTTCTTTTTGTGTCTGGAGTGTGCCCATCCGGTAGTCTTCACAGCGGAGTGATCCAGCTATGGGACTACCGGATGGGCACACTTACTGATAGATTTGATGAGCATGAGGGGCCTGTTCGTGGTGTTCACTTTCACAAGTCTCAGCTTCTTTTTGTGTCTGGAGGGGATGATTATAAGATTAAAGTGTGGAACTATAAGACTCATAGGTGTCTATTTACTCTTCTTGGACACCTTGATTATATACGTACTGTGCAATTTCACCATGAGTATCCATGGATTGTGAGTGCTAGTGATGATCAGACTATTCGTATATGGAACTGGCAATCACGTACATGTATCTCTGTGTTGACGGGCCACAATCACTATGTAATGTGTGCATCATTCCACCCTAAGGAAGATCTTGTTGTGTCAGCTTCCCTAGATCAGACCGTTCGTGTATGGGACATTGGTGCCTTGAGGAAGAAGACTGTATCTCCAGCAGATGATGTCTTGCGGTTGAGTCAAATGAATGCTGATCTATTTGGCGGAGTTGATGCTGTTGTTAAATATGTCTTGGAAGGTCATGATCGAGGGGTTAATTGGGCGGCATTCCATCCAACCCTGCCATTGATTGTGTCAGGGGCTGATGATCGACAAGTGAAATTGTGGCGAATGAACGACACAAAAGCGTGGGAAGTGGACACACTAAGGGGGCACATGAATAATGTTTCATGTGTGATGTTCCATGCCAAACAAGATATAATCGTTTCCAACTCAGAGGATAAAAGCATTCGTATTTGGGATGCTACAAAGCGAACTGGACTTCAGACATTTCGTAGAGAGCATGATAGATTTTGGATTCTTGCTGCTCACCCTGAGATGAATTTGTTGGCAGCTGGGCATGACAGTGGCATGATTGTCTTTAAGCTGGAGAGAGAAAGACCGGCCTTTGCTATAAGTGGCGATTCTCTATTTTATGTGAAGGACCGGTTTTTGCGCTTCTATGAGTTCTCCACTCAAAAAGATTCACAGGTCATCCCGATTCGAAGGCCTGGTTCCACTAGCTTGAATCAGAGCCCAAGGACCCTTTCATTTAGCCCTACTGAAAACACAATTCTTATTTGCTCAGATCTGGATGGGGGGTGTTATGAATTTTACACCATTCCTAAGGATAGCTTTGGTAGAAGCGATGGCTTCCAAGATGCAAAGAGAGGACTTGGAGGATCGGCAGTGTTTGTGGCTCGGAATAGGTTTGCCGTGCTTGATAAAAGTCACAACCAAGTCTTGTTAAAAAATCTTAAGAATGAGGTTGTTAAGAAGGTCCCTATTCCCATTACTGCAGATGCAATATTTTATGCTGGAACTGGTAATTTATTGTGCCGAGCAGAGGATAGAGTTGTTATATATGATCTTCAACAGCGAATTATTCTTGGTGATCTTCAAACCCCTTTTGTTAGGTACGTTGTTTGGTCCAATGACATGGAGAGTGTTGCATTGCTTAGCAAACATGCAATTATTATTGCTAACAAGAAACTTGTTCACCAGTGCACACTTCATGAGACAATTCGTGTAAAGAGTGGAGCATGGGATGATAATGGTGTTTTTATCTACACAACCCTAAACCACATTAAGTATTGCCTCCCGAATGGAGATAGTGGTATAATCAGAACCCTCGATGTTCCAATATATATTACAAAGGTTTCTGGCAATACACTTTTTTGCTTGGATAGGGAGGGAACAGTTCGATCGTTGATTATTGATGCAACAGAATACATATTCAAACTCTCTCTCCTGAAGAAGAGATTTGACCATGTCATGAGCATGATAAAGAACTCACAGCTCTGTGGGCAAGCAATGATTGCCTATTTGCAACAAAAGGGATTTCCTGAAGTTGCACTTCACTTTGTGAAGGACGAGAGAACCAGGTTCAATTTGGCTCTTGAAAGTGGAAACATTCAGATTGCAGTTGCTTCTGCTACAGCAATTGATGAGAAAGATCATTGGTATAGGCTGGGTGTGGAGGCTCTTCGTCAAGGCAATGCAGGCATCGTGGAATACGCCTATCAGAAGACAAAAAATTTTGAGAGGTTATCATTTCTTTATCTCATAACTGGTAACACAGCAAAACTGTCCAAGATGTTAAAGATCGCTGAAGTTAAGAATGATGTCATGGGTCAATTTCACAATGGTCTATATCTTGGTGATGTGCGTGAGCGCGTAAAGATCTTGGAGAGTGTTGGCCACTTACCTCTTGCGTACATCACAGCATCAACCCATGGTTTACATGATGTAGCTGAAAGGCTAGCTGCTGAATTGGGAGATGACATTCCATCTTTACCAGAAGGCAAGACCGCATCCCTCCTCTTGCCTCCTACTCCAGTCATGTGCGGTGGTGATTGGCCACTTCTGAGAGTCATGAAAGGAATATTTGAAGGTGGGTTGGATAATGTGGGTGCTGGTCGTGCTGACGAAGACGATGACGAGGTTGCAGATGGTGATTGGGGTGAGGAGCTGGATGTGGTTGATGTTGATGGCTTACAGAATGGGGATGTGACAGCAATTTTGGAGGATGAGGAAGGTGCAGAAGGAAATGAGGAAGAAGGGGGATGGGACCTTGAAGATTTGGAACTCCCACCAGAGGCTGACACCCCAAAAGTATCAGTCAGTTCTCGCAGTTCAGTTTTTGTGGCCCCAACTCCTGGCCTGCCTGCCAACCAGGTTTGGATACAGAGGTCGTCCCTTGCTGCAGAACATGCTGCGGCTGCATCAACCCATGGTTTACATGATGTAGCTGAAAGGCTAGCTGCTGAATTGGGAGATGACATTCCATCTTTACCAGAAGGCAAGACCGCATCCCTCCTCTTGCCTCCTACTCCAGTCATGTGCGGTGGTGATTGGCCACTTCTGAGAGTCATGAAAGGAATATTTGAAGGTGGGTTGGATAATGTGGGTGCTGGTCGTGCTGACGAAGACGATGACGAGGTTGCAGATGGTGATTGGGGTGAGGAGCTGGATGTGGTTGATGTTGATGGCTTACAGAATGGGGATGTGACAGCAATTTTGGAGGATGAGGAAGGTGCAGAAGGAAATGAGGAAGAAGGGGGATGGGACCTTGAAGATTTGGAACTCCCACCAGAGGCTGACACCCCAAAAGTATCAGTCAGTTCTCGCAGTTCAGTTTTTGTGGCCCCAACTCCTGGCCTGCCTGCCAACCAGGTTTGGATACAGAAGTCGTCCCTTGCTGCAGAGCATGCTGCGGCTGGTAATTTTGATACTGCAATGCGGTTGCTTAGCAGACAACTAGGAATTAAAAACTTTGCTCCCTTAAGACCCATATTTCTTGATCTTCGTGCCGGGAGTCAAACCTATCTTCGTGCCTTTTCATCTGCTCCCATAATATCATTAGCAGTTGAACGAGGATTCAGTGAATCTAGCAATCCGAATGCAAAAGGATCTCCTGCACTTATTTACAGTTTCACTCAGTTGGAGGAGAAGCTTAAAGCTGGTTACAAGGCCACAACATCAGGGAAGTTTGCTGAGGCTCTTCGTCTTTTTCTTTCTATTCTTCATACCATCCCTCTGATTGTTGTTGAGTCTAGGAGGGAAGTGGATGAGGTGAAGGAGTTAATTATTATCGTTAAAGAGTATGTTTTGGGTTTGCAAATGGAACTGAAGAGGAGGGAACTCAAGGACAATCCAGTACGCCAGATGGAGCTTGCAGCCTATTTTACGCACTGCAACCTGCAGTTGCCACATTTGAGGCTTGCTCTATTAAATGCTATGACTGTCTGTTACAAGGCTAAGAACCTTGCCAGTGCTGCAAACTTTGCTCGCAGACTTCTTGAGACTAATCCTTCAATTGAGAATCAAGCTAAGACAGCCAGGCAAGTTCTGCAGGCTGCAGAGAGGAATATGACAGATGCCTCCCAACTGAATTATGACTTTAGAAACCCTTTCGTGACCTGTGGTGCAACTTACGTTCCAATTTACCGAGGTCAGAAGGATGTTTCTTGCCCATACTGTAGTTCCAGGTTTGTGCCAGGTCAGGAAGGGAAAATTTGCACTGTTTGTGATCTTGCTGTTATTGGAGCAGATGCATCTGGTTTACTTTGTTCTCCCACCCAAAATCGATGA | 5166 | 45.93 | MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHKSQPLFVSGVCPSGSLHSGVIQLWDYRMGTLTDRFDEHEGPVRGVHFHKSQLLFVSGVCPSGSLHSGVIQLWDYRMGTLTDRFDEHEGPVRGVHFHKSQLLFVSGVCPSGSLHSGVIQLWDYRMGTLTDRFDEHEGPVRGVHFHKSQLLFVSGVCPSGSLHSGVIQLWDYRMGTLTDRFDEHEGPVRGVHFHKSQLLFVSGVCPSGSLHSGVIQLWDYRMGTLTDRFDEHEGPVRGVHFHKSQLLFVSGVCPSGSLHSGVIQLWDYRMGTLTDRFDEHEGPVRGVHFHKSQLLFVSGVCPSGSLHSGVIQLWDYRMGTLTDRFDEHEGPVRGVHFHKSQLLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDVLRLSQMNADLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGLQTFRREHDRFWILAAHPEMNLLAAGHDSGMIVFKLERERPAFAISGDSLFYVKDRFLRFYEFSTQKDSQVIPIRRPGSTSLNQSPRTLSFSPTENTILICSDLDGGCYEFYTIPKDSFGRSDGFQDAKRGLGGSAVFVARNRFAVLDKSHNQVLLKNLKNEVVKKVPIPITADAIFYAGTGNLLCRAEDRVVIYDLQQRIILGDLQTPFVRYVVWSNDMESVALLSKHAIIIANKKLVHQCTLHETIRVKSGAWDDNGVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTLFCLDREGTVRSLIIDATEYIFKLSLLKKRFDHVMSMIKNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNIQIAVASATAIDEKDHWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFLYLITGNTAKLSKMLKIAEVKNDVMGQFHNGLYLGDVRERVKILESVGHLPLAYITASTHGLHDVAERLAAELGDDIPSLPEGKTASLLLPPTPVMCGGDWPLLRVMKGIFEGGLDNVGAGRADEDDDEVADGDWGEELDVVDVDGLQNGDVTAILEDEEGAEGNEEEGGWDLEDLELPPEADTPKVSVSSRSSVFVAPTPGLPANQVWIQRSSLAAEHAAAASTHGLHDVAERLAAELGDDIPSLPEGKTASLLLPPTPVMCGGDWPLLRVMKGIFEGGLDNVGAGRADEDDDEVADGDWGEELDVVDVDGLQNGDVTAILEDEEGAEGNEEEGGWDLEDLELPPEADTPKVSVSSRSSVFVAPTPGLPANQVWIQKSSLAAEHAAAGNFDTAMRLLSRQLGIKNFAPLRPIFLDLRAGSQTYLRAFSSAPIISLAVERGFSESSNPNAKGSPALIYSFTQLEEKLKAGYKATTSGKFAEALRLFLSILHTIPLIVVESRREVDEVKELIIIVKEYVLGLQMELKRRELKDNPVRQMELAAYFTHCNLQLPHLRLALLNAMTVCYKAKNLASAANFARRLLETNPSIENQAKTARQVLQAAERNMTDASQLNYDFRNPFVTCGATYVPIYRGQKDVSCPYCSSRFVPGQEGKICTVCDLAVIGADASGLLCSPTQNR | 1721 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 4269558 | 4278500 | - | ClCG11G004040.1 | Cla11g00380 | 284202 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla11g00380 | 1721 | Pfam | Coatomer WD associated region | 677 | 1104 | IPR006692 | GO:0005198|GO:0006886|GO:0016192|GO:0030117 | |
| Cla11g00380 | 1721 | PRINTS | G protein beta WD-40 repeat signature | 486 | 500 | IPR020472 | - | |
| Cla11g00380 | 1721 | PRINTS | G protein beta WD-40 repeat signature | 444 | 458 | IPR020472 | - | |
| Cla11g00380 | 1721 | PRINTS | G protein beta WD-40 repeat signature | 599 | 613 | IPR020472 | - | |
| Cla11g00380 | 1721 | CDD | WD40 | 331 | 653 | - | - | |
| Cla11g00380 | 1721 | Gene3D | - | 976 | 1148 | - | - | |
| Cla11g00380 | 1721 | PANTHER | COATOMER | 1 | 69 | - | - | |
| Cla11g00380 | 1721 | PANTHER | COATOMER | 1270 | 1683 | - | - | |
| Cla11g00380 | 1721 | SUPERFAMILY | Quinoprotein alcohol dehydrogenase-like | 22 | 502 | IPR011047 | - | |
| Cla11g00380 | 1721 | PANTHER | COATOMER SUBUNIT ALPHA | 363 | 1267 | - | - | |
| Cla11g00380 | 1721 | PANTHER | COATOMER SUBUNIT ALPHA | 1 | 69 | - | - | |
| Cla11g00380 | 1721 | PANTHER | COATOMER SUBUNIT ALPHA | 1270 | 1683 | - | - | |
| Cla11g00380 | 1721 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 580 | 612 | - | - | |
| Cla11g00380 | 1721 | MobiDBLite | consensus disorder prediction | 1200 | 1231 | - | - | |
| Cla11g00380 | 1721 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 467 | 500 | - | - | |
| Cla11g00380 | 1721 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 383 | 424 | IPR001680 | GO:0005515 | |
| Cla11g00380 | 1721 | MobiDBLite | consensus disorder prediction | 1200 | 1221 | - | - | |
| Cla11g00380 | 1721 | Pfam | Coatomer (COPI) alpha subunit C-terminus | 1317 | 1720 | IPR010714 | GO:0005198|GO:0005515|GO:0006886|GO:0016192|GO:0030126 | |
| Cla11g00380 | 1721 | Pfam | Coatomer (COPI) alpha subunit C-terminus | 1151 | 1267 | IPR010714 | GO:0005198|GO:0005515|GO:0006886|GO:0016192|GO:0030126 | |
| Cla11g00380 | 1721 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 467 | 500 | IPR001680 | GO:0005515 | |
| Cla11g00380 | 1721 | PANTHER | COATOMER SUBUNIT ALPHA | 123 | 165 | - | - | |
| Cla11g00380 | 1721 | PANTHER | COATOMER SUBUNIT ALPHA | 75 | 117 | - | - | |
| Cla11g00380 | 1721 | PANTHER | COATOMER SUBUNIT ALPHA | 267 | 309 | - | - | |
| Cla11g00380 | 1721 | PANTHER | COATOMER SUBUNIT ALPHA | 315 | 357 | - | - | |
| Cla11g00380 | 1721 | PANTHER | COATOMER SUBUNIT ALPHA | 171 | 213 | - | - | |
| Cla11g00380 | 1721 | PANTHER | COATOMER SUBUNIT ALPHA | 219 | 261 | - | - | |
| Cla11g00380 | 1721 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 486 | 500 | IPR019775 | - | |
| Cla11g00380 | 1721 | CDD | WD40 | 91 | 415 | - | - | |
| Cla11g00380 | 1721 | PANTHER | COATOMER | 123 | 165 | - | - | |
| Cla11g00380 | 1721 | PANTHER | COATOMER | 75 | 117 | - | - | |
| Cla11g00380 | 1721 | PANTHER | COATOMER | 363 | 1267 | - | - | |
| Cla11g00380 | 1721 | PANTHER | COATOMER | 267 | 309 | - | - | |
| Cla11g00380 | 1721 | PANTHER | COATOMER | 315 | 357 | - | - | |
| Cla11g00380 | 1721 | PANTHER | COATOMER | 171 | 213 | - | - | |
| Cla11g00380 | 1721 | PANTHER | COATOMER | 219 | 261 | - | - | |
| Cla11g00380 | 1721 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 536 | 570 | - | - | |
| Cla11g00380 | 1721 | SUPERFAMILY | C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase | 573 | 884 | IPR011048 | - | |
| Cla11g00380 | 1721 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 536 | 577 | IPR001680 | GO:0005515 | |
| Cla11g00380 | 1721 | SUPERFAMILY | WD40 repeat-like | 365 | 651 | IPR036322 | GO:0005515 | |
| Cla11g00380 | 1721 | Pfam | WD domain, G-beta repeat | 534 | 567 | IPR001680 | GO:0005515 | |
| Cla11g00380 | 1721 | Pfam | WD domain, G-beta repeat | 462 | 499 | IPR001680 | GO:0005515 | |
| Cla11g00380 | 1721 | Pfam | WD domain, G-beta repeat | 420 | 457 | IPR001680 | GO:0005515 | |
| Cla11g00380 | 1721 | Pfam | WD domain, G-beta repeat | 577 | 612 | IPR001680 | GO:0005515 | |
| Cla11g00380 | 1721 | Pfam | WD domain, G-beta repeat | 382 | 415 | IPR001680 | GO:0005515 | |
| Cla11g00380 | 1721 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 383 | 418 | - | - | |
| Cla11g00380 | 1721 | SMART | WD40_4 | 136 | 181 | IPR001680 | GO:0005515 | |
| Cla11g00380 | 1721 | SMART | WD40_4 | 376 | 415 | IPR001680 | GO:0005515 | |
| Cla11g00380 | 1721 | SMART | WD40_4 | 184 | 229 | IPR001680 | GO:0005515 | |
| Cla11g00380 | 1721 | SMART | WD40_4 | 40 | 85 | IPR001680 | GO:0005515 | |
| Cla11g00380 | 1721 | SMART | WD40_4 | 88 | 133 | IPR001680 | GO:0005515 | |
| Cla11g00380 | 1721 | SMART | WD40_4 | 615 | 653 | IPR001680 | GO:0005515 | |
| Cla11g00380 | 1721 | SMART | WD40_4 | 573 | 612 | IPR001680 | GO:0005515 | |
| Cla11g00380 | 1721 | SMART | WD40_4 | 280 | 325 | IPR001680 | GO:0005515 | |
| Cla11g00380 | 1721 | SMART | WD40_4 | 2 | 37 | IPR001680 | GO:0005515 | |
| Cla11g00380 | 1721 | SMART | WD40_4 | 328 | 373 | IPR001680 | GO:0005515 | |
| Cla11g00380 | 1721 | SMART | WD40_4 | 232 | 277 | IPR001680 | GO:0005515 | |
| Cla11g00380 | 1721 | SMART | WD40_4 | 418 | 457 | IPR001680 | GO:0005515 | |
| Cla11g00380 | 1721 | SMART | WD40_4 | 529 | 568 | IPR001680 | GO:0005515 | |
| Cla11g00380 | 1721 | SMART | WD40_4 | 460 | 499 | IPR001680 | GO:0005515 | |
| Cla11g00380 | 1721 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 425 | 466 | IPR001680 | GO:0005515 | |
| Cla11g00380 | 1721 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 425 | 457 | - | - | |
| Cla11g00380 | 1721 | Coils | Coil | 1628 | 1655 | - | - | |
| Cla11g00380 | 1721 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 580 | 621 | IPR001680 | GO:0005515 | |
| Cla11g00380 | 1721 | Gene3D | - | 313 | 359 | IPR015943 | GO:0005515 | |
| Cla11g00380 | 1721 | Gene3D | - | 360 | 655 | IPR015943 | GO:0005515 | |
| Cla11g00380 | 1721 | Gene3D | - | 216 | 263 | IPR015943 | GO:0005515 | |
| Cla11g00380 | 1721 | Gene3D | - | 169 | 215 | IPR015943 | GO:0005515 | |
| Cla11g00380 | 1721 | Gene3D | - | 72 | 120 | IPR015943 | GO:0005515 | |
| Cla11g00380 | 1721 | Gene3D | - | 1 | 71 | IPR015943 | GO:0005515 | |
| Cla11g00380 | 1721 | Gene3D | - | 121 | 168 | IPR015943 | GO:0005515 | |
| Cla11g00380 | 1721 | Gene3D | - | 264 | 312 | IPR015943 | GO:0005515 |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla11g00380 | K05236 | COPA, RET1; coatomer subunit alpha | - | csv:101204161 | 1748.02 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla11g00380 | Cla-Chr11:4269558 | Cla11g00382 | Cla-Chr11:4282872 | 3.12E-39 | dispersed | |
| Cla11g00380 | Cla-Chr11:4269558 | Cla11g00381 | Cla-Chr11:4275249 | 1.73E-74 | tandem | |
| Cla04g00934 | Cla-Chr4:24315938 | Cla11g00380 | Cla-Chr11:4269558 | 9.17E-07 | transposed | |
| Cla09g01679 | Cla-Chr9:33622813 | Cla11g00380 | Cla-Chr11:4269558 | 6.63E-07 | transposed | |
| Cla11g00629 | Cla-Chr11:7227677 | Cla11g00380 | Cla-Chr11:4269558 | 7.29E-09 | transposed | |
| Cla11g01258 | Cla-Chr11:26103111 | Cla11g00380 | Cla-Chr11:4269558 | 3.23E-10 | transposed | |
| Cla11g00380 | Cla-Chr11:4269558 | Cla02g00493 | Cla-Chr2:4880642 | 5.78E-38 | wgd |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi18g1035 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Blo17g00761 | Blo18g00790 | Bda08g01238 | Bda01g01520 | Bpe02g01716 | Bpe05g00125 | Bma01g00740 | Bma05g00150 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Cla11g00380 | Cam11g0427 | Cec11g0421 | Cco11g0415 | Clacu11g0549 | Cmu11g0406 | Cre11g0892 | . | . | . | . |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0000684 | 3 | 4 | 3 | 3 | 2 | 3 | 5 | 3 | 3 | 3 | 3 | 3 | 5 | 3 | 3 | 5 | 3 | 4 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 2 | 3 | 7 | 4 | 1 | 99 |
Transcriptome
| Select | Gene | Chr | Type | da1 | da2 | da3 | da4 | da5 | da6 | da7 | da8 | da9 | da10 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Cla11g00380 | Cla_Chr11 | FPKM | 38.843304 | 48.049522 | 50.715969 | 54.096329 | 70.714745 | 68.707718 | 75.780037 | 88.64669 | 91.762558 | 97.388657 |