Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00386 ATGGCAACTTACTACTCTAGTTCGAATAACGAAAGGGATGCTACTCCCATCCTCTATTCAAGGGGATCTTTGCTCGGTTCGTATGAAGAAACAACAGTTCTTCCACGGAATATGATGATGCATGTAAATTCTGGGACATACATGGATTCATTGCCTTCGCAGGCGCAAAATGGTTGTGGTCAGATAACGTCCGTTGGAGCAGTGGGAACTACCCAACAGCAGCAAGAGTTTTTATCGAATCTTGGTGGTTCGCAAATTGCTGAGCATGATTTCAATACATGGAGAGAGAACCGGAGTGAAATGCTTGGCACAAACTCGATGCGTGGCCCTACCAATGTTCTTCATGGTGGGCATAATTTGCAGGGTCAGGGGTTATCCCTTACTCTCAGTACACAAATCCCATCTGCAATCCAAATCCCTTCAATCCCCTACAGAAATTCGGATATGGGTTTAACTTCATTCCTGAGTCCTAATCCGACTAATTCAGGCGAGGATGGCTGCAGAAATGGCGCTTCTAGAGACGAACAGATGAGAAATGGAGAAAACTTGCCACCTAATTTTCAAGAATTGGCTAAGGGTGAATTATCTCAATTCAGCATGTCTAGTATTGCAAGAACTATGCCCAATTCAAAGTACCTCAAGGCAGCTCAACAACTGCTTGATGAAGTTGTTAATGTCAGGAAAGCTTTGAAGCGACCTAATAATGAGAGAAACCAGAGTTCACATGAGCATGAAACTAGAAGTGCAAAGAATGGTGATGCAGGAACCAAAAATGACAGTTCGATGCTCACTGCGAGTGGAGCATCTTCAAACCCTCAAGAAACTGGGAGCAATTCAACATGTGAGCTCTCACATGCCGAAAAGCAAGATTTGCAGAACAAGTTGACAAAGCTTTTGTACATGTTGGATGAGGTTGATAGAAGGTACAATCAGTATTATCATCAGATGCAGATTGTGGTGTCATCATTTGATGTGATAGCTGGATGTGGGGCATCTAAACCATATACTGCACTTGCTCTCCAGACTATATCCCGTCATTTTCGGTGCTTGCGGGATGCAATAGCTGGTCAAGTCAGAGCTACCCGTAAAAGCCTAGGAGAGCATGAAAATTCTGGAAATGACAAAGGAGTTGGAATCACTCGTCTCCGATATGTGGACCAGCAGTTAAGGCAACAGAGGGCTCTTCAGCAGCTTGGTATGATTCAGCAGCATGCTTGGAGGCCTCAAAGAGGGTTGCCTGAGAACTCTGTTTCAATTCTCCGTGCTTGGCTGTTCGAGCATTTCCTTCATCCGTATCCAAAGGATTCTGATAAGATCATGCTGGCACGGCAGACAGGATTGACTAGAAGTCAGGTCTCTAATTGGTTTATCAATGCGCGTGTACGTCTTTGGAAACCTATGGTAGAGGAGATGTACAAGGAAGAAATAGGAAGTGTAGACATGGACTCTATATCATCATCTGAAAATGCTGTCAAGGCAACAAAAGGAGATAACAAGACCTTTGAGGATGATAAAGAGGAGGATCTGCAACAAAGTGCAAGCTCAACAGCCACCGAAAGATGTAGTGCTGGAGACATTATCGACTTAAAATCTGATCAAGTCTCTAATCTCGGAAATTCCAGTTCCAACAGACTAGCTAGTTTCCAAAATGGTGCTCACATTGAAGCTCGAAATGAGCTGGTGAAACCGAGTGAGGAGTTAAGGCCTAATGTAAATAACTCTAGTTTCTTTCCTGATGCAATTGTCCACTCTCAGGGTGAGAGTGACAGGTTTATGGCTGCCGCTGCTGCCTATCACATGTCTGAATTGGGAAGGTTTGGGACGGTTGGCGGGGTATCGCTTACGCTGGGTTTGCAGCATTGTGAGGGTGGTGGCATGCCTATGCCTGCTGGGACACATCATGGTTTTGCAGCCATGAGAGGAGACGATATGTACAATGCCGCAGCGTCTTCTCTCGGGGAAACGGTGCATTTTGAATGCGTAAATAGTGGGAATCCGCAACCGAGGTTTGGCGCTTCCCATCTTTATCATGATTTTGTTGTGTAA 2046 44.92 MATYYSSSNNERDATPILYSRGSLLGSYEETTVLPRNMMMHVNSGTYMDSLPSQAQNGCGQITSVGAVGTTQQQQEFLSNLGGSQIAEHDFNTWRENRSEMLGTNSMRGPTNVLHGGHNLQGQGLSLTLSTQIPSAIQIPSIPYRNSDMGLTSFLSPNPTNSGEDGCRNGASRDEQMRNGENLPPNFQELAKGELSQFSMSSIARTMPNSKYLKAAQQLLDEVVNVRKALKRPNNERNQSSHEHETRSAKNGDAGTKNDSSMLTASGASSNPQETGSNSTCELSHAEKQDLQNKLTKLLYMLDEVDRRYNQYYHQMQIVVSSFDVIAGCGASKPYTALALQTISRHFRCLRDAIAGQVRATRKSLGEHENSGNDKGVGITRLRYVDQQLRQQRALQQLGMIQQHAWRPQRGLPENSVSILRAWLFEHFLHPYPKDSDKIMLARQTGLTRSQVSNWFINARVRLWKPMVEEMYKEEIGSVDMDSISSSENAVKATKGDNKTFEDDKEEDLQQSASSTATERCSAGDIIDLKSDQVSNLGNSSSNRLASFQNGAHIEARNELVKPSEELRPNVNNSSFFPDAIVHSQGESDRFMAAAAAYHMSELGRFGTVGGVSLTLGLQHCEGGGMPMPAGTHHGFAAMRGDDMYNAAASSLGETVHFECVNSGNPQPRFGASHLYHDFVV 681
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4333548 4338151 + ClCG11G004100.1 Cla11g00386 284208

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00386 681 MobiDBLite consensus disorder prediction 151 186 - -
Cla11g00386 681 Gene3D - 401 479 - -
Cla11g00386 681 ProSiteProfiles 'Homeobox' domain profile. 403 466 IPR001356 GO:0003677
Cla11g00386 681 MobiDBLite consensus disorder prediction 231 285 - -
Cla11g00386 681 Pfam Homeobox KN domain 423 462 IPR008422 GO:0003677|GO:0006355
Cla11g00386 681 SMART HOX_1 406 470 IPR001356 GO:0003677
Cla11g00386 681 MobiDBLite consensus disorder prediction 486 520 - -
Cla11g00386 681 SUPERFAMILY Homeodomain-like 407 474 IPR009057 -
Cla11g00386 681 MobiDBLite consensus disorder prediction 495 510 - -
Cla11g00386 681 MobiDBLite consensus disorder prediction 151 167 - -
Cla11g00386 681 CDD homeodomain 406 467 IPR001356 GO:0003677
Cla11g00386 681 MobiDBLite consensus disorder prediction 253 285 - -
Cla11g00386 681 MobiDBLite consensus disorder prediction 231 252 - -
Cla11g00386 681 SMART prehox3 201 356 IPR006563 -
Cla11g00386 681 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 71 631 - -
Cla11g00386 681 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 10 71 631 - -
Cla11g00386 681 Coils Coil 288 308 - -
Cla11g00386 681 Pfam Associated with HOX 208 355 IPR006563 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00386 - - - csv:101205137 1301.58
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g00248 Cla-Chr9:2482644 Cla11g00386 Cla-Chr11:4333548 5.01E-103 dispersed
Cla10g01741 Cla-Chr10:33296516 Cla11g00386 Cla-Chr11:4333548 1.78E-101 dispersed
Cla10g02042 Cla-Chr10:36169958 Cla11g00386 Cla-Chr11:4333548 1.72E-54 dispersed
Cla11g00386 Cla-Chr11:4333548 Cla02g02176 Cla-Chr2:36850444 1.20E-101 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1007 . Blo12g00899 . Bda03g00272 . . Bma04g00222 . . . . . . . . . . . . . . . . . . . . . . . . Cone4ag1939 Cone7ag1851 . . . . . . . . . Bda01g01513 Bpe02g01709 . Bma01g00745 Bma05g00135 . . . . . . . . . . . . . . . . Cla11g00386 Cam11g0432 Cec11g0426 Cco11g0420 Clacu11g0554 Cmu11g0411 Cre11g0897 . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cla05g00862 . 43 527 Homeobox Transcription Factor Family AT4G00730 55.6 1.1e-138 490.7
Cla05g00193 CCT,ECH 43 495 Homeobox Transcription Factor Family AT4G00730 57.0 5.0e-136 481.9
Cla07g01251 . 20 703 Homeobox Transcription Factor Family AT1G79840 58.9 1.1e-217 753.4
Cla09g00177 . 52 740 Homeobox Transcription Factor Family AT1G79840 52.7 3.4e-203 705.3
Cla05g02458 . 298 445 Homeobox Transcription Factor Family AT1G69780 78.1 2.2e-55 213.0
Cla01g02453 . 4 873 Homeobox Transcription Factor Family AT2G34710 76.3 0.0e+00 1321.2
Cla03g00588 CCT 4 837 Homeobox Transcription Factor Family AT2G34710 78.8 0.0e+00 1306.6
Cla02g02065 . 23 872 Homeobox Transcription Factor Family AT2G34710 67.1 0.0e+00 1125.2
Cla09g00009 . 3 842 Homeobox Transcription Factor Family AT2G34710 65.8 0.0e+00 1094.3
Cla11g01479 . 1 842 Homeobox Transcription Factor Family AT2G34710 64.6 4.2e-312 1067.4
Cla01g01351 . 52 883 Homeobox Transcription Factor Family AT2G34710 64.7 1.8e-307 1052.0
Cla09g00009 . 1 794 Homeobox Transcription Factor Family AT1G52150 84.9 0.0e+00 1345.5
Cla11g01479 . 7 794 Homeobox Transcription Factor Family AT1G52150 77.7 0.0e+00 1223.0
Cla01g02453 . 7 830 Homeobox Transcription Factor Family AT1G52150 64.5 4.3e-295 1010.7
Cla03g00588 CCT 14 796 Homeobox Transcription Factor Family AT1G52150 66.2 2.0e-292 1001.9
Cla02g02065 . 23 823 Homeobox Transcription Factor Family AT1G52150 65.1 4.2e-290 994.2
Cla01g01351 . 61 834 Homeobox Transcription Factor Family AT1G52150 62.4 1.1e-269 926.4
Cla10g00236 . 1 278 Homeobox Transcription Factor Family AT4G16780 61.6 1.3e-81 300.1
Cla05g00044 CCT 6 309 Homeobox Transcription Factor Family AT4G16780 51.1 1.3e-63 240.4
Cla01g01751 . 58 228 Homeobox Transcription Factor Family AT4G16780 62.2 7.4e-48 188.0
Cla10g01677 . 165 327 Homeobox Transcription Factor Family AT4G16780 64.5 2.2e-47 186.4
Cla10g00795 . 10 248 Homeobox Transcription Factor Family AT4G16780 50.8 1.8e-46 183.3
Cla09g00345 . 172 295 Homeobox Transcription Factor Family AT4G16780 75.2 9.1e-46 181.0
Cla06g01380 . 146 262 Homeobox Transcription Factor Family AT4G16780 70.1 2.6e-40 162.9
Cla05g01809 . 75 227 Homeobox Transcription Factor Family AT4G16780 59.1 1.7e-39 160.2
Cla10g01206 . 152 269 Homeobox Transcription Factor Family AT4G16780 63.9 1.7e-36 150.2
Cla05g02458 . 300 446 Homeobox Transcription Factor Family AT5G15150 57.2 2.9e-37 152.9
Cla10g00236 . 25 243 Homeobox Transcription Factor Family AT2G44910 62.2 7.5e-65 244.6
Cla05g00044 CCT 45 315 Homeobox Transcription Factor Family AT2G44910 57.5 2.7e-62 236.1
Cla01g01751 . 70 235 Homeobox Transcription Factor Family AT2G44910 61.2 1.3e-48 190.7
Cla10g01677 . 171 326 Homeobox Transcription Factor Family AT2G44910 64.6 1.1e-47 187.6
Cla09g00345 . 180 304 Homeobox Transcription Factor Family AT2G44910 77.8 2.4e-47 186.4
Cla10g00795 . 130 250 Homeobox Transcription Factor Family AT2G44910 73.0 7.3e-44 174.9
Cla06g01380 . 146 271 Homeobox Transcription Factor Family AT2G44910 66.7 2.2e-40 163.3
Cla10g01206 . 150 268 Homeobox Transcription Factor Family AT2G44910 65.8 1.2e-38 157.5
Cla05g01809 . 75 227 Homeobox Transcription Factor Family AT2G44910 56.0 2.1e-38 156.8
Cla11g01479 . 18 842 Homeobox Transcription Factor Family AT4G32880 79.8 0.0e+00 1340.1
Cla09g00009 . 9 842 Homeobox Transcription Factor Family AT4G32880 78.2 0.0e+00 1312.4
Cla01g02453 . 14 873 Homeobox Transcription Factor Family AT4G32880 63.9 5.9e-311 1063.5
Cla02g02065 . 14 872 Homeobox Transcription Factor Family AT4G32880 63.4 1.7e-305 1045.4
Cla03g00588 CCT 14 842 Homeobox Transcription Factor Family AT4G32880 64.1 2.4e-304 1041.6
Cla01g01351 . 55 883 Homeobox Transcription Factor Family AT4G32880 61.5 1.4e-291 999.2
Cla01g02453 . 7 873 Homeobox Transcription Factor Family AT1G30490 75.3 0.0e+00 1282.3
Cla03g00588 CCT 7 836 Homeobox Transcription Factor Family AT1G30490 77.8 0.0e+00 1259.6
Cla02g02065 . 5 872 Homeobox Transcription Factor Family AT1G30490 63.9 0.0e+00 1077.8
Cla09g00009 . 2 842 Homeobox Transcription Factor Family AT1G30490 63.3 3.7e-305 1044.3
Cla01g01351 . 52 883 Homeobox Transcription Factor Family AT1G30490 63.6 2.3e-299 1025.0
Cla11g01479 . 2 842 Homeobox Transcription Factor Family AT1G30490 62.0 1.7e-294 1008.8
Cla02g00833 CCT,ECH 41 763 Homeobox Transcription Factor Family AT4G21750 70.5 7.0e-295 1010.0
Cla02g00180 CCT,ECH 49 789 Homeobox Transcription Factor Family AT4G21750 68.8 8.9e-290 993.0
Cla01g02157 CCT 1 713 Homeobox Transcription Factor Family AT4G21750 67.3 2.4e-279 958.4
Cla03g00460 CCT 7 752 Homeobox Transcription Factor Family AT4G21750 64.1 1.3e-259 892.9
Cla01g01594 . 306 553 Homeobox Transcription Factor Family AT5G41410 51.3 4.0e-67 253.1
Cla02g01273 . 497 751 Homeobox Transcription Factor Family AT5G41410 52.6 2.5e-61 233.8
Cla10g01741 . 253 453 Homeobox Transcription Factor Family AT5G41410 55.1 7.4e-61 232.3
Cla11g00386 . 283 482 Homeobox Transcription Factor Family AT5G41410 54.9 9.0e-59 225.3
Cla02g02176 . 250 452 Homeobox Transcription Factor Family AT5G41410 54.6 1.7e-57 221.1
Cla09g00248 . 228 430 Homeobox Transcription Factor Family AT5G41410 51.2 5.9e-50 196.1
Cla03g00278 . 479 675 Homeobox Transcription Factor Family AT5G41410 52.3 3.8e-49 193.4
Cla01g00239 . 173 390 Homeobox Transcription Factor Family AT4G36870 54.9 7.6e-65 245.4
Cla03g00278 . 473 651 Homeobox Transcription Factor Family AT4G36870 57.0 1.2e-46 184.9
Cla10g01741 . 185 425 Homeobox Transcription Factor Family AT1G75410 51.4 3.4e-54 209.5
Cla02g02176 . 182 424 Homeobox Transcription Factor Family AT1G75410 50.4 1.1e-52 204.5
Cla03g00278 . 473 650 Homeobox Transcription Factor Family AT1G75410 51.1 1.9e-41 167.2
Cla01g01594 . 297 695 Homeobox Transcription Factor Family AT2G23760 59.2 3.8e-106 382.9
Cla02g01273 . 489 901 Homeobox Transcription Factor Family AT2G23760 59.7 7.3e-102 368.6
Cla02g02176 . 183 453 Homeobox Transcription Factor Family AT1G19700 54.9 3.0e-66 250.0
Cla01g01594 . 299 556 Homeobox Transcription Factor Family AT1G19700 52.3 9.7e-65 245.0
Cla10g00236 . 1 278 Homeobox Transcription Factor Family AT4G17460 57.0 7.1e-75 277.7
Cla05g00044 CCT 1 293 Homeobox Transcription Factor Family AT4G17460 51.5 7.1e-59 224.6
Cla01g01751 . 1 230 Homeobox Transcription Factor Family AT4G17460 52.2 1.2e-45 180.6
Cla09g00345 . 166 301 Homeobox Transcription Factor Family AT4G17460 71.6 2.9e-44 176.0
Cla10g01677 . 169 310 Homeobox Transcription Factor Family AT4G17460 66.4 1.9e-43 173.3
Cla06g01380 . 146 268 Homeobox Transcription Factor Family AT4G17460 64.2 1.7e-36 150.2
Cla10g00236 . 1 278 Homeobox Transcription Factor Family AT5G47370 59.0 1.1e-75 280.4
Cla05g00044 CCT 1 309 Homeobox Transcription Factor Family AT5G47370 52.1 1.9e-59 226.5
Cla09g00345 . 72 301 Homeobox Transcription Factor Family AT5G47370 52.8 1.3e-47 187.2
Cla01g01751 . 1 230 Homeobox Transcription Factor Family AT5G47370 51.6 6.3e-47 184.9
Cla10g01677 . 171 309 Homeobox Transcription Factor Family AT5G47370 71.4 1.0e-44 177.6
Cla10g00795 . 113 249 Homeobox Transcription Factor Family AT5G47370 67.1 2.3e-41 166.4
Cla06g01380 . 146 268 Homeobox Transcription Factor Family AT5G47370 65.9 4.5e-37 152.1
Cla01g01751 . 1 264 Homeobox Transcription Factor Family AT4G37790 62.8 8.2e-84 307.4
Cla10g00795 . 1 278 Homeobox Transcription Factor Family AT4G37790 56.3 6.5e-73 271.2
Cla05g01809 . 1 267 Homeobox Transcription Factor Family AT4G37790 52.5 4.3e-56 215.3
Cla10g01677 . 97 309 Homeobox Transcription Factor Family AT4G37790 54.2 6.8e-54 208.0
Cla10g00236 . 4 228 Homeobox Transcription Factor Family AT4G37790 50.4 4.6e-50 195.3
Cla09g00345 . 167 294 Homeobox Transcription Factor Family AT4G37790 74.8 1.9e-48 189.9
Cla06g01380 . 146 261 Homeobox Transcription Factor Family AT4G37790 73.3 1.0e-41 167.5
Cla10g01206 . 149 264 Homeobox Transcription Factor Family AT4G37790 70.7 3.0e-41 166.0
Cla10g00236 . 2 235 Homeobox Transcription Factor Family AT3G60390 58.5 1.3e-69 260.4
Cla05g00044 CCT 1 315 Homeobox Transcription Factor Family AT3G60390 52.7 1.3e-69 260.4
Cla10g01677 . 173 312 Homeobox Transcription Factor Family AT3G60390 70.8 3.7e-48 189.1
Cla09g00345 . 180 304 Homeobox Transcription Factor Family AT3G60390 78.6 3.7e-48 189.1
Cla01g01751 . 70 228 Homeobox Transcription Factor Family AT3G60390 64.2 1.8e-47 186.8
Cla10g00795 . 100 248 Homeobox Transcription Factor Family AT3G60390 65.2 1.0e-45 181.0
Cla06g01380 . 146 271 Homeobox Transcription Factor Family AT3G60390 66.7 2.0e-41 166.8
Cla10g01206 . 152 268 Homeobox Transcription Factor Family AT3G60390 66.9 1.2e-38 157.5
Cla05g01809 . 106 227 Homeobox Transcription Factor Family AT3G60390 64.8 1.0e-37 154.5
Cla05g01109 . 342 652 Homeobox Transcription Factor Family AT3G19510 58.5 6.2e-91 332.4
Cla01g01751 . 1 264 Homeobox Transcription Factor Family AT2G22800 60.1 5.8e-74 274.6
Cla10g00795 . 1 278 Homeobox Transcription Factor Family AT2G22800 54.7 9.6e-69 257.3
Cla05g01809 . 5 267 Homeobox Transcription Factor Family AT2G22800 52.3 9.0e-59 224.2
Cla10g01677 . 159 309 Homeobox Transcription Factor Family AT2G22800 64.9 8.5e-49 191.0
Cla10g00236 . 4 228 Homeobox Transcription Factor Family AT2G22800 52.3 3.2e-48 189.1
Cla09g00345 . 174 294 Homeobox Transcription Factor Family AT2G22800 76.2 4.6e-47 185.3
Cla10g01206 . 149 264 Homeobox Transcription Factor Family AT2G22800 69.8 1.4e-40 163.7
Cla06g01380 . 143 261 Homeobox Transcription Factor Family AT2G22800 70.6 3.6e-39 159.1
Cla05g00044 CCT 138 276 Homeobox Transcription Factor Family AT2G22800 61.2 4.7e-39 158.7
Cla06g00005 CCT,ECH 1 958 Homeobox Transcription Factor Family AT3G61150 54.7 3.7e-254 874.8
Cla05g00862 . 55 779 Homeobox Transcription Factor Family AT3G61150 58.8 2.1e-233 805.8
Cla05g00193 CCT,ECH 47 739 Homeobox Transcription Factor Family AT3G61150 59.9 2.2e-230 795.8
Cla02g00180 CCT,ECH 62 789 Homeobox Transcription Factor Family AT3G61150 50.6 1.5e-199 693.3
Cla02g00833 CCT,ECH 69 762 Homeobox Transcription Factor Family AT3G61150 50.2 5.7e-194 674.9
Cla05g01810 CCT 95 363 Homeobox Transcription Factor Family AT4G08150 79.5 5.4e-121 431.4
Cla08g01650 CCT 103 378 Homeobox Transcription Factor Family AT4G08150 67.8 9.6e-102 367.5
Cla02g00217 . 82 326 Homeobox Transcription Factor Family AT4G08150 57.5 1.3e-71 267.3
Cla05g02558 . 1 360 Homeobox Transcription Factor Family AT1G70510 52.9 2.0e-94 342.8
Cla05g01810 CCT 100 338 Homeobox Transcription Factor Family AT1G70510 50.6 2.8e-64 242.7
Cla08g01650 CCT 107 347 Homeobox Transcription Factor Family AT1G70510 51.0 1.1e-63 240.7
Cla05g01707 . 172 500 Homeobox Transcription Factor Family AT5G25220 79.9 4.6e-139 491.5
Cla08g01353 . 160 495 Homeobox Transcription Factor Family AT5G25220 74.1 5.0e-133 471.5
Cla01g00313 . 24 323 Homeobox Transcription Factor Family AT5G25220 64.1 8.0e-99 357.8
Cla05g01707 . 213 507 Homeobox Transcription Factor Family AT5G11060 82.8 3.8e-135 478.4
Cla08g01353 . 216 505 Homeobox Transcription Factor Family AT5G11060 78.9 1.0e-127 453.8
Cla01g00313 . 32 322 Homeobox Transcription Factor Family AT5G11060 63.6 1.6e-96 350.1
Cla05g01707 . 209 485 Homeobox Transcription Factor Family AT4G32040 73.8 1.5e-112 403.3
Cla08g01353 . 202 480 Homeobox Transcription Factor Family AT4G32040 72.2 4.1e-110 395.2
Cla01g00313 . 25 308 Homeobox Transcription Factor Family AT4G32040 58.2 1.0e-84 310.8
Cla05g02558 . 1 364 Homeobox Transcription Factor Family AT1G23380 58.3 3.3e-108 388.7
Cla05g01810 CCT 98 338 Homeobox Transcription Factor Family AT1G23380 54.9 3.0e-69 259.2
Cla08g01650 CCT 107 347 Homeobox Transcription Factor Family AT1G23380 51.4 2.9e-64 242.7
Cla01g00313 . 1 322 Homeobox Transcription Factor Family AT1G62990 71.7 1.4e-121 433.0
Cla05g01707 . 222 499 Homeobox Transcription Factor Family AT1G62990 65.5 2.8e-98 355.5
Cla08g01353 . 213 494 Homeobox Transcription Factor Family AT1G62990 64.2 5.8e-96 347.8
Cla05g02458 . 298 445 Homeobox Transcription Factor Family AT1G26960 63.1 1.5e-39 160.2
Cla04g01235 . 1 799 Homeobox Transcription Factor Family AT1G17920 54.1 3.4e-216 748.4
Cla04g01235 . 19 796 Homeobox Transcription Factor Family AT1G73360 57.3 5.9e-235 810.8
Cla05g01141 . 90 774 Homeobox Transcription Factor Family AT1G73360 51.1 4.2e-188 655.2
Cla05g02480 . 1 171 Homeobox Transcription Factor Family AT1G27050 52.8 2.3e-43 172.6
Cla01g00591 . 37 201 Homeobox Transcription Factor Family AT1G70920 57.0 6.5e-42 167.5
Cla07g00648 . 32 198 Homeobox Transcription Factor Family AT1G70920 57.3 3.5e-40 161.8
Cla02g00833 CCT,ECH 68 763 Homeobox Transcription Factor Family AT1G05230 82.5 0.0e+00 1100.1
Cla02g00180 CCT,ECH 49 788 Homeobox Transcription Factor Family AT1G05230 73.7 3.8e-306 1047.3
Cla01g02157 CCT 20 716 Homeobox Transcription Factor Family AT1G05230 64.4 6.5e-250 860.5
Cla03g00460 CCT 59 759 Homeobox Transcription Factor Family AT1G05230 60.8 2.5e-233 805.4
Cla05g00193 CCT,ECH 111 740 Homeobox Transcription Factor Family AT1G05230 51.7 5.5e-172 601.7
Cla07g00851 CCT 1 150 Homeobox Transcription Factor Family AT2G18550 57.3 2.4e-38 156.0
Cla02g00833 CCT,ECH 90 763 Homeobox Transcription Factor Family AT2G32370 56.2 1.3e-205 713.4
Cla02g00180 CCT,ECH 67 787 Homeobox Transcription Factor Family AT2G32370 50.9 3.5e-195 678.7
Cla05g00862 . 33 780 Homeobox Transcription Factor Family AT5G52170 51.7 5.5e-198 688.0
Cla05g00193 CCT,ECH 111 741 Homeobox Transcription Factor Family AT5G52170 51.3 4.5e-176 615.1
Cla01g01886 CCT 61 220 Homeobox Transcription Factor Family AT5G66700 54.4 3.3e-38 155.6
Cla09g01099 . 14 780 Homeobox Transcription Factor Family AT5G46880 59.6 2.3e-251 865.5
Cla10g01741 . 181 454 Homeobox Transcription Factor Family AT2G16400 57.2 9.9e-77 284.6
Cla02g02176 . 181 456 Homeobox Transcription Factor Family AT2G16400 56.2 2.7e-74 276.6
Cla01g01594 . 299 554 Homeobox Transcription Factor Family AT2G16400 51.7 1.5e-64 244.2
Cla02g02176 . 168 452 Homeobox Transcription Factor Family AT2G27220 53.1 1.2e-65 247.7
Cla10g02042 CCT,ECH 186 335 Homeobox Transcription Factor Family AT2G27220 54.2 9.2e-42 168.3
Cla01g01594 . 290 558 Homeobox Transcription Factor Family AT2G35940 50.7 4.7e-64 243.0
Cla09g00248 . 144 422 Homeobox Transcription Factor Family AT2G35940 50.5 2.0e-62 237.7
Cla01g00239 . 225 420 Homeobox Transcription Factor Family AT2G35940 61.5 1.3e-61 235.0
Cla10g02042 CCT,ECH 186 339 Homeobox Transcription Factor Family AT2G35940 53.9 2.6e-46 184.1
Cla04g00762 CCT,ECH 171 343 Homeobox Transcription Factor Family AT2G35940 51.3 9.7e-46 182.2
Cla02g01273 . 484 751 Homeobox Transcription Factor Family AT4G34610 51.1 2.1e-56 217.2
Cla01g00239 . 249 421 Homeobox Transcription Factor Family AT4G34610 60.7 3.2e-52 203.4
Cla03g00278 . 502 670 Homeobox Transcription Factor Family AT4G34610 62.1 7.1e-52 202.2
Cla04g00762 CCT,ECH 189 333 Homeobox Transcription Factor Family AT4G34610 53.8 6.3e-40 162.5
Cla02g00833 CCT,ECH 41 761 Homeobox Transcription Factor Family AT4G04890 73.0 1.1e-300 1029.2
Cla02g00180 CCT,ECH 56 788 Homeobox Transcription Factor Family AT4G04890 71.4 2.6e-294 1008.1
Cla01g02157 CCT 1 713 Homeobox Transcription Factor Family AT4G04890 69.0 2.1e-280 961.8
Cla03g00460 CCT 1 752 Homeobox Transcription Factor Family AT4G04890 64.0 2.2e-261 898.7
Cla05g00862 . 50 778 Homeobox Transcription Factor Family AT4G04890 51.6 9.2e-199 690.6
Cla05g00193 CCT,ECH 111 739 Homeobox Transcription Factor Family AT4G04890 51.6 6.2e-179 624.8
Cla06g01355 . 140 603 Homeobox Transcription Factor Family AT4G29940 54.2 6.7e-128 455.3
Cla02g02065 . 1 872 Homeobox Transcription Factor Family AT5G60690 79.3 0.0e+00 1365.5
Cla01g01351 . 52 883 Homeobox Transcription Factor Family AT5G60690 76.2 0.0e+00 1245.7
Cla01g02453 . 1 873 Homeobox Transcription Factor Family AT5G60690 66.8 0.0e+00 1106.7
Cla03g00588 CCT 1 836 Homeobox Transcription Factor Family AT5G60690 67.3 0.0e+00 1097.8
Cla09g00009 . 9 842 Homeobox Transcription Factor Family AT5G60690 65.4 2.7e-311 1064.7
Cla11g01479 . 20 842 Homeobox Transcription Factor Family AT5G60690 63.0 4.0e-299 1024.2
Cla01g02117 . 123 451 Homeobox Transcription Factor Family AT1G62360 63.6 1.2e-106 383.6
Cla02g00217 . 90 341 Homeobox Transcription Factor Family AT1G62360 71.7 2.7e-101 365.9
Cla05g01810 CCT 102 342 Homeobox Transcription Factor Family AT1G62360 60.6 3.9e-76 282.3
Cla08g01650 CCT 106 352 Homeobox Transcription Factor Family AT1G62360 54.4 4.8e-66 248.8
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010110 0 2 0 0 0 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 33
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62006 PF07526 POX 4.00E-51 No_clan Cla TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cla11g00386 Cla_Chr11 FPKM 19.867924 21.293526 15.744827 16.057745 17.351847 19.742407 16.020483 19.551878 22.143705 18.570629