Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla11g00420 | ATGGAGAGGCAGAGCATGAATATAGCGAAACAAGAAGGAAGGCAATGGCAGAATAATCGGAGAAGAAGAGTTTCCCAACGCCGCCGCTGTCGTTTTTGGAGCACCGGTCAGAGTTTCTCCGGCACTATTCAGACCACTACTCCTTTGCCGGAAACTCTACTAATGTCTTCTTCATCCGATCCTCCTTCCCCTTCTTCTTCTGATTCTGATCCCTCTAATCCCCCTCCTTCTCCACCTCCTTCCACTGCGCCGCCTCCCGATGCTTCTCCGCCTCCCCCGGATTCCTCCTCCTCCTCTCCTCCTCCGCCGGATTCTTCTCCTCCTCCTCCACCCGATGCTTCTTCTCCACCTCCGCCAGATGCATCCCCGCCGCCGCCTAACGACACCTCCCCGCCTCCTGGTGATTCCTCTTCTTCACCGCCACCGCCGAAGGATTCCAACTCTAATTCTCCTCCGTCGCCGCCGCCTCCTCCACCACCACCACCGCCGCCGCCGCCGCCTCCTCCGCCGCGTGGATCCTCAAGGCATTCTCCTCCGCCTCCGAGATCGATCGACTCAGGATCCTCAGACTCCTCGTCCGGCGGTTCCGCTCCCCAGGCGGTGCCGATCATTGTAGGAGTGGCGGTGGCGGCAGGGTTTTTACTTTTCGCCATGGCCTTGATATTCTTCGCTTGCACCCGAAAGAAAAAGAAGCAAAATAGTAATTCCATGTATTTCGATGAACAGTCCGGTCCGAAAGGTGGGGATCCATATTACAACGGAAGGAATCACAACTGGAACAACCCGAGCGAACATTTCGTGAACATGGCGCCAATCAGCGGCGGAACCCAAGGAGGAGGGTGGCCATCGCCGCCGCCGCCTCCTCCGCCGGGATTATTGAGCAGTGATATGAGCTCGAATTTCTCAGGGCCACATGGGCCACCGTTGCCGCCGCCGCACCCATCGGTGGCTCTGGGGTTCAATAAGAGCACTTTCACGTATGATGAGCTGATGGCGGCAACCTCGGGATTCTCTCCGGCGAATCTGTTGGGGCAAGGAGGATTCGGGTATGTTCATAAAGGACTACTGCCCAACGGCAAGGAAATTGCAGTGAAAAGCCTGAAAACAGGAAGCGGGCAAGGAGATCGAGAATTTGCGGCCGAGGTGGAGATCATCAGCCGCGTTCACCACCGCCATCTGGTGTCCCTTGTCGGGTATTGCATCGCCGGTGACCGGAAGATGTTGGTTTACGAATTTGTCCCTAATAACAACCTCGAATTCCACCTTCACGGCAAGGGGCGGCCACCATTGGACTGGTCGACGAGAACGAAGATCGCATTGGGCTCAGCCAAGGGCCTAGCCTATCTCCACGAAGACTATATATTCTCATTTGGAGTAATGCTTTTGGAGCTGATTACCGGAAGACGACCGGTGGACACGGCCGGGGAAATGGAAGACAGCTTAGTGGACTGGTCAAGGCCTCTTTGTGTGAAAGCAATGAGTAATGGAAACTATGATGAGTTGGCTGATTCACGGTTAGAGAAGAACTATGATGTCCAAGAAATGGCTTGCATGGTGGCTTGCGCCGCCGCTTGCATTCGCCATTCGGCTCGGCGCCGTCCCAAAATGAGCCAGGTGGTACGAGCATTGGAAGGCGATGTGTCGCTGGATGACTTGAACGATGGAGTAAAGCCAGGGCAAAGCTCATACTTCGGGTCCGGCACGTCCTCGGAGTACGACGCAAGCTCCTATAGTGCCGACATGAAGAGGTTCCGAAAGGTGGCGTTGGACAGCCGCGAGTACGCAAGCAGCGATTATGGCGGCACTAGCGATGAAGTAGTGAAGAACAAACCTGAAAAGGTAGTTGTGAAATCTTCGCCATTTCAATCCCATCCACCGACGAATTTTCCCTCCAACTCTCTTCCATTCCGATCTCTCGCCGCTTCTTCCGCCATGGCTCAGCCTCTTGTCAAGAAGGACGACGACTACGACGACGAAGAGGAATATTCTCCGTTTTTGGGGATTGAGAAAGGTACTGTTCTTCAGGAAGCAAGGGTATTCAATGATCCTCAGCTAGACACAAGGAAATGCTCCCAGGTCATAACGAAGCTTTTGTATCTTCTCAACCAAGGTGAAACCTTCACAAAGGTTGAAGCTACAGAAGTGTTCTTTGGTGTGACTAAGCTCTTCCAGTCCAGAGATATAGAATTGAGGAGAATGGTTTATTTAATGATAAAGGAGCTCTCTCCATCTTCTGATGATGTTATCATCGTGACAAGCTCCTTGATGAAGGACATGAACAGCAAGAATGATATGTACCGTGCTAATGCTATACGTGTACTTTGTAGAATTACAGATGGTACCCTTCTCACCCAAATTGAGCGGTATCTGAAACAAGCAATTGTGGACAAAAACCCAGTGGTTGCTAGCGCAGCCTTGGTTAGTGGGATTCATTTACTCCAGACCAATCCTGAGATTGTGAAGCGATGGAGTAATGAGGTCCAGGAAGCTGTTCAGTCAAGGGCACCACTTGTACAATTTCATGCCTTGGGTTTGCTTCATCAGATTCGTCAGAATGATCGTTTAGCCGTTAACAAGTTGGTTAGTAGCTTGACGCGGGGCACTGCTCGCTCTCCTCTGGCCCAATGCCTTTTGGTTCGTTATGCCAGTCAGGTTGCTAGTGAATCAGCTGCTAATAGTCAAACTGGGGACCGACCTTTATATGATTTTCTAGACAGTTGTCTGCGGCACAAATCAGAGATGGTCATTCTTGAGGCTGCCAGAGCTATTGCAGAACTAAACGGTGTGACAAGTAGAGAAGTTACTCCAGCAATTACTGTACTTCAGCTCTTTTTAAACTCTCCCAAGCCAGTACTGAGATTTGCTGCTATCCGTACTCTGAACAAGGTGGCAATGACACATCCAATGGCTGTCACGAACTGTAACATTGATATGGAGAGTTTGATTTCAGACCAGAACAGAAGCATTGCAACTCTTGCAATAACCACACTTCTAAAGACTGGAAATGAATCAAGTGTGGATCGCCTGATGAAACAGATAACAAACTTTATGTCAGATATTGCTGATGAATTTAAAATTGTAGTTGTGGATGCCATTAGATCCCTGTGTTTGAAGTTTCCATTGAAGTACAGATCTCTGATGAACTTCCTATGCAACATTCTCAGAGAAGAAGGTGGATTTGAGTACAAAAAGGTGATAGTTGATTCAATTGTGATCCTTATTAGAGATATCCCTGAAGCAAAAGAAAATGGTTTGCTTCATTTGTGTGAGTTCATAGAGGATTGCGAATTCACTTATCTTTCCACACAGATACTACACTTTTTGGGAATTGAAGGTCCGAAAGCCTCAGATCCTAGCAAGTATATACGTTATATATATAATCGTGTACATCTCGAGAATGCAACTGTTCGAGCCTGTGCAGTGAGCACTTTGGCGAAGTTTGCTGTCATGGTTGATTCGTTGAAGCCCCGAATATATGTTCTCCTCCGACGATGCCTTTTTGACAGTGATGATGAGGTTCGTGATAGGGCAACCCTTTATCTTAAGACACTTGGAGCAGATGGTTCAGTTCTTGAAAATGAGAAAGACGTGCAAGAAGTTCTTTTTGGCTCTCTAGACTTGCCACTGGGGAATCTAGAGACCAGTTTAAAAAATTATGAGCCTTCTGAAGAACCGTTTGATCTTGATTCTGTACCTAAGGAGATGAAATCCCAGCCACTTGCTGAGAAGAAAGGCAGTGGTAAAAAATCGAATGGGCTTGGGGCTCCTCCCGTTACCCTTGCCTCTTCTGTTGATGCTTATGAAAAGATGCTTCGCTCCATTGAAGAATTTGCTGACTTTGGGAAGCTTTTCAAGTCGTCTGCATCTTTGGAGCTTACAGAGGCAGAAACAGAGTATGCTGTCAATGTTGTCAAGCATATTTTTGATAGACATGTTGTCTTTCAATACAACTGCACAAATACAATTCCTGAGCAGCTACTAGAAAATGTCAATGTTATTGTGGATGCTTCAGAAGCAGAGGAATTCGCGGAAGTAGTGTCCAAGCCGCTCAGATCTCTTCCTTACAATTCACCTGGGCAAACCTTTGTGGCATTTGAGAAGCCAGATGGAGTCGCTGCTGTTGGAAAGTTCTCAAATATGTTGAAGTTCATTGTCAAAGAGATTGATCCGTCTACTGGCGAGACAGAGGACGATGGTGTTGAAGATGAATATCAGCTTGAGGACGTTGAGGTGGTAGCAGCAGATTACATGTTGAAAGTAGCAGTGTCTAACTTCAGGAATGCATGGGAAAGCATGGGTGAAGATGGTGAACGAGTAGATGAATATGGATTAGGTCCGAGGGGGAGCTTGGCTGAAGCTGTGCGTGCTGTCATAGATCTTTTAGGCATGCAGCCTTGTGAGGGCACAGAAGTTGTCCCAAGCAATCTGCGATCACACACATGTTTACTATCTGGTATATTCATTGGAAACGTGAGAGTACTCGCCCGTCTCTCATTTGGTCTTGATGCTTCAAGGGAGGTTGCAATGAAGCTGGTCGTTAGATCTGACGATGGAACAGTCAGTGATCTCATTCACGAGATCATCTCCAGCGGCTAA | 4596 | 48.37 | MERQSMNIAKQEGRQWQNNRRRRVSQRRRCRFWSTGQSFSGTIQTTTPLPETLLMSSSSDPPSPSSSDSDPSNPPPSPPPSTAPPPDASPPPPDSSSSSPPPPDSSPPPPPDASSPPPPDASPPPPNDTSPPPGDSSSSPPPPKDSNSNSPPSPPPPPPPPPPPPPPPPPRGSSRHSPPPPRSIDSGSSDSSSGGSAPQAVPIIVGVAVAAGFLLFAMALIFFACTRKKKKQNSNSMYFDEQSGPKGGDPYYNGRNHNWNNPSEHFVNMAPISGGTQGGGWPSPPPPPPPGLLSSDMSSNFSGPHGPPLPPPHPSVALGFNKSTFTYDELMAATSGFSPANLLGQGGFGYVHKGLLPNGKEIAVKSLKTGSGQGDREFAAEVEIISRVHHRHLVSLVGYCIAGDRKMLVYEFVPNNNLEFHLHGKGRPPLDWSTRTKIALGSAKGLAYLHEDYIFSFGVMLLELITGRRPVDTAGEMEDSLVDWSRPLCVKAMSNGNYDELADSRLEKNYDVQEMACMVACAAACIRHSARRRPKMSQVVRALEGDVSLDDLNDGVKPGQSSYFGSGTSSEYDASSYSADMKRFRKVALDSREYASSDYGGTSDEVVKNKPEKVVVKSSPFQSHPPTNFPSNSLPFRSLAASSAMAQPLVKKDDDYDDEEEYSPFLGIEKGTVLQEARVFNDPQLDTRKCSQVITKLLYLLNQGETFTKVEATEVFFGVTKLFQSRDIELRRMVYLMIKELSPSSDDVIIVTSSLMKDMNSKNDMYRANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTNPEIVKRWSNEVQEAVQSRAPLVQFHALGLLHQIRQNDRLAVNKLVSSLTRGTARSPLAQCLLVRYASQVASESAANSQTGDRPLYDFLDSCLRHKSEMVILEAARAIAELNGVTSREVTPAITVLQLFLNSPKPVLRFAAIRTLNKVAMTHPMAVTNCNIDMESLISDQNRSIATLAITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVDAIRSLCLKFPLKYRSLMNFLCNILREEGGFEYKKVIVDSIVILIRDIPEAKENGLLHLCEFIEDCEFTYLSTQILHFLGIEGPKASDPSKYIRYIYNRVHLENATVRACAVSTLAKFAVMVDSLKPRIYVLLRRCLFDSDDEVRDRATLYLKTLGADGSVLENEKDVQEVLFGSLDLPLGNLETSLKNYEPSEEPFDLDSVPKEMKSQPLAEKKGSGKKSNGLGAPPVTLASSVDAYEKMLRSIEEFADFGKLFKSSASLELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLENVNVIVDASEAEEFAEVVSKPLRSLPYNSPGQTFVAFEKPDGVAAVGKFSNMLKFIVKEIDPSTGETEDDGVEDEYQLEDVEVVAADYMLKVAVSNFRNAWESMGEDGERVDEYGLGPRGSLAEAVRAVIDLLGMQPCEGTEVVPSNLRSHTCLLSGIFIGNVRVLARLSFGLDASREVAMKLVVRSDDGTVSDLIHEIISSG | 1531 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4778874 | 4801942 | - | ClCG11G004470.2 | Cla11g00420 | 284242 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla11g00420 | 1531 | MobiDBLite | consensus disorder prediction | 231 | 310 | - | - | |
Cla11g00420 | 1531 | ProSitePatterns | Protein kinases ATP-binding region signature. | 343 | 365 | IPR017441 | GO:0005524 | |
Cla11g00420 | 1531 | Gene3D | Transferase(Phosphotransferase) domain 1 | 414 | 453 | - | - | |
Cla11g00420 | 1531 | Pfam | Adaptin N terminal region | 670 | 1184 | IPR002553 | GO:0006886|GO:0016192|GO:0030117 | |
Cla11g00420 | 1531 | Gene3D | Coatomer, gamma subunit, appendage domain | 1259 | 1412 | IPR037067 | GO:0005198|GO:0006886|GO:0016192|GO:0030126 | |
Cla11g00420 | 1531 | SUPERFAMILY | Clathrin adaptor appendage domain | 1263 | 1415 | IPR013041 | - | |
Cla11g00420 | 1531 | Gene3D | - | 1413 | 1529 | IPR012295 | - | |
Cla11g00420 | 1531 | Gene3D | Phosphorylase Kinase; domain 1 | 315 | 412 | - | - | |
Cla11g00420 | 1531 | Pfam | Coatomer subunit gamma-1 C-terminal appendage platform | 1414 | 1528 | IPR032154 | - | |
Cla11g00420 | 1531 | ProSiteProfiles | Protein kinase domain profile. | 337 | 666 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla11g00420 | 1531 | Gene3D | Transferase(Phosphotransferase) domain 1 | 454 | 553 | - | - | |
Cla11g00420 | 1531 | MobiDBLite | consensus disorder prediction | 67 | 177 | - | - | |
Cla11g00420 | 1531 | Gene3D | - | 667 | 960 | IPR011989 | - | |
Cla11g00420 | 1531 | MobiDBLite | consensus disorder prediction | 1221 | 1243 | - | - | |
Cla11g00420 | 1531 | MobiDBLite | consensus disorder prediction | 30 | 66 | - | - | |
Cla11g00420 | 1531 | SUPERFAMILY | ARM repeat | 669 | 1233 | IPR016024 | - | |
Cla11g00420 | 1531 | PANTHER | COATOMER SUBUNIT GAMMA | 645 | 1531 | - | - | |
Cla11g00420 | 1531 | Pfam | Coatomer gamma subunit appendage platform subdomain | 1266 | 1411 | IPR013040 | GO:0005198|GO:0006886|GO:0016192|GO:0030126 | |
Cla11g00420 | 1531 | MobiDBLite | consensus disorder prediction | 1 | 198 | - | - | |
Cla11g00420 | 1531 | MobiDBLite | consensus disorder prediction | 1221 | 1254 | - | - | |
Cla11g00420 | 1531 | SUPERFAMILY | Subdomain of clathrin and coatomer appendage domain | 1416 | 1527 | IPR009028 | GO:0006886|GO:0016192|GO:0030117 | |
Cla11g00420 | 1531 | MobiDBLite | consensus disorder prediction | 179 | 198 | - | - | |
Cla11g00420 | 1531 | SUPERFAMILY | Protein kinase-like (PK-like) | 312 | 543 | IPR011009 | - | |
Cla11g00420 | 1531 | PANTHER | COATOMER SUBUNIT GAMMA | 645 | 1531 | IPR017106 | - | |
Cla11g00420 | 1531 | Pfam | Protein tyrosine and serine/threonine kinase | 342 | 452 | IPR001245 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla11g00420 | Cla-Chr11:4778874 | Cla07g00865 | Cla-Chr7:24038856 | 1.13E-120 | dispersed | |
Cla01g00248 | Cla-Chr1:2511127 | Cla11g00420 | Cla-Chr11:4778874 | 2.57E-17 | transposed | |
Cla02g00214 | Cla-Chr2:2208769 | Cla11g00420 | Cla-Chr11:4778874 | 7.99E-17 | transposed | |
Cla07g01347 | Cla-Chr7:30626947 | Cla11g00420 | Cla-Chr11:4778874 | 5.39E-07 | transposed | |
Cla11g00420 | Cla-Chr11:4778874 | Cla02g00528 | Cla-Chr2:5442824 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80923 | PF01602 | Adaptin_N | 6.90E-130 | CL0020 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla11g00420 | K17267 | - | csv:101213217 | 1662.89 |