Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00420 ATGGAGAGGCAGAGCATGAATATAGCGAAACAAGAAGGAAGGCAATGGCAGAATAATCGGAGAAGAAGAGTTTCCCAACGCCGCCGCTGTCGTTTTTGGAGCACCGGTCAGAGTTTCTCCGGCACTATTCAGACCACTACTCCTTTGCCGGAAACTCTACTAATGTCTTCTTCATCCGATCCTCCTTCCCCTTCTTCTTCTGATTCTGATCCCTCTAATCCCCCTCCTTCTCCACCTCCTTCCACTGCGCCGCCTCCCGATGCTTCTCCGCCTCCCCCGGATTCCTCCTCCTCCTCTCCTCCTCCGCCGGATTCTTCTCCTCCTCCTCCACCCGATGCTTCTTCTCCACCTCCGCCAGATGCATCCCCGCCGCCGCCTAACGACACCTCCCCGCCTCCTGGTGATTCCTCTTCTTCACCGCCACCGCCGAAGGATTCCAACTCTAATTCTCCTCCGTCGCCGCCGCCTCCTCCACCACCACCACCGCCGCCGCCGCCGCCTCCTCCGCCGCGTGGATCCTCAAGGCATTCTCCTCCGCCTCCGAGATCGATCGACTCAGGATCCTCAGACTCCTCGTCCGGCGGTTCCGCTCCCCAGGCGGTGCCGATCATTGTAGGAGTGGCGGTGGCGGCAGGGTTTTTACTTTTCGCCATGGCCTTGATATTCTTCGCTTGCACCCGAAAGAAAAAGAAGCAAAATAGTAATTCCATGTATTTCGATGAACAGTCCGGTCCGAAAGGTGGGGATCCATATTACAACGGAAGGAATCACAACTGGAACAACCCGAGCGAACATTTCGTGAACATGGCGCCAATCAGCGGCGGAACCCAAGGAGGAGGGTGGCCATCGCCGCCGCCGCCTCCTCCGCCGGGATTATTGAGCAGTGATATGAGCTCGAATTTCTCAGGGCCACATGGGCCACCGTTGCCGCCGCCGCACCCATCGGTGGCTCTGGGGTTCAATAAGAGCACTTTCACGTATGATGAGCTGATGGCGGCAACCTCGGGATTCTCTCCGGCGAATCTGTTGGGGCAAGGAGGATTCGGGTATGTTCATAAAGGACTACTGCCCAACGGCAAGGAAATTGCAGTGAAAAGCCTGAAAACAGGAAGCGGGCAAGGAGATCGAGAATTTGCGGCCGAGGTGGAGATCATCAGCCGCGTTCACCACCGCCATCTGGTGTCCCTTGTCGGGTATTGCATCGCCGGTGACCGGAAGATGTTGGTTTACGAATTTGTCCCTAATAACAACCTCGAATTCCACCTTCACGGCAAGGGGCGGCCACCATTGGACTGGTCGACGAGAACGAAGATCGCATTGGGCTCAGCCAAGGGCCTAGCCTATCTCCACGAAGACTATATATTCTCATTTGGAGTAATGCTTTTGGAGCTGATTACCGGAAGACGACCGGTGGACACGGCCGGGGAAATGGAAGACAGCTTAGTGGACTGGTCAAGGCCTCTTTGTGTGAAAGCAATGAGTAATGGAAACTATGATGAGTTGGCTGATTCACGGTTAGAGAAGAACTATGATGTCCAAGAAATGGCTTGCATGGTGGCTTGCGCCGCCGCTTGCATTCGCCATTCGGCTCGGCGCCGTCCCAAAATGAGCCAGGTGGTACGAGCATTGGAAGGCGATGTGTCGCTGGATGACTTGAACGATGGAGTAAAGCCAGGGCAAAGCTCATACTTCGGGTCCGGCACGTCCTCGGAGTACGACGCAAGCTCCTATAGTGCCGACATGAAGAGGTTCCGAAAGGTGGCGTTGGACAGCCGCGAGTACGCAAGCAGCGATTATGGCGGCACTAGCGATGAAGTAGTGAAGAACAAACCTGAAAAGGTAGTTGTGAAATCTTCGCCATTTCAATCCCATCCACCGACGAATTTTCCCTCCAACTCTCTTCCATTCCGATCTCTCGCCGCTTCTTCCGCCATGGCTCAGCCTCTTGTCAAGAAGGACGACGACTACGACGACGAAGAGGAATATTCTCCGTTTTTGGGGATTGAGAAAGGTACTGTTCTTCAGGAAGCAAGGGTATTCAATGATCCTCAGCTAGACACAAGGAAATGCTCCCAGGTCATAACGAAGCTTTTGTATCTTCTCAACCAAGGTGAAACCTTCACAAAGGTTGAAGCTACAGAAGTGTTCTTTGGTGTGACTAAGCTCTTCCAGTCCAGAGATATAGAATTGAGGAGAATGGTTTATTTAATGATAAAGGAGCTCTCTCCATCTTCTGATGATGTTATCATCGTGACAAGCTCCTTGATGAAGGACATGAACAGCAAGAATGATATGTACCGTGCTAATGCTATACGTGTACTTTGTAGAATTACAGATGGTACCCTTCTCACCCAAATTGAGCGGTATCTGAAACAAGCAATTGTGGACAAAAACCCAGTGGTTGCTAGCGCAGCCTTGGTTAGTGGGATTCATTTACTCCAGACCAATCCTGAGATTGTGAAGCGATGGAGTAATGAGGTCCAGGAAGCTGTTCAGTCAAGGGCACCACTTGTACAATTTCATGCCTTGGGTTTGCTTCATCAGATTCGTCAGAATGATCGTTTAGCCGTTAACAAGTTGGTTAGTAGCTTGACGCGGGGCACTGCTCGCTCTCCTCTGGCCCAATGCCTTTTGGTTCGTTATGCCAGTCAGGTTGCTAGTGAATCAGCTGCTAATAGTCAAACTGGGGACCGACCTTTATATGATTTTCTAGACAGTTGTCTGCGGCACAAATCAGAGATGGTCATTCTTGAGGCTGCCAGAGCTATTGCAGAACTAAACGGTGTGACAAGTAGAGAAGTTACTCCAGCAATTACTGTACTTCAGCTCTTTTTAAACTCTCCCAAGCCAGTACTGAGATTTGCTGCTATCCGTACTCTGAACAAGGTGGCAATGACACATCCAATGGCTGTCACGAACTGTAACATTGATATGGAGAGTTTGATTTCAGACCAGAACAGAAGCATTGCAACTCTTGCAATAACCACACTTCTAAAGACTGGAAATGAATCAAGTGTGGATCGCCTGATGAAACAGATAACAAACTTTATGTCAGATATTGCTGATGAATTTAAAATTGTAGTTGTGGATGCCATTAGATCCCTGTGTTTGAAGTTTCCATTGAAGTACAGATCTCTGATGAACTTCCTATGCAACATTCTCAGAGAAGAAGGTGGATTTGAGTACAAAAAGGTGATAGTTGATTCAATTGTGATCCTTATTAGAGATATCCCTGAAGCAAAAGAAAATGGTTTGCTTCATTTGTGTGAGTTCATAGAGGATTGCGAATTCACTTATCTTTCCACACAGATACTACACTTTTTGGGAATTGAAGGTCCGAAAGCCTCAGATCCTAGCAAGTATATACGTTATATATATAATCGTGTACATCTCGAGAATGCAACTGTTCGAGCCTGTGCAGTGAGCACTTTGGCGAAGTTTGCTGTCATGGTTGATTCGTTGAAGCCCCGAATATATGTTCTCCTCCGACGATGCCTTTTTGACAGTGATGATGAGGTTCGTGATAGGGCAACCCTTTATCTTAAGACACTTGGAGCAGATGGTTCAGTTCTTGAAAATGAGAAAGACGTGCAAGAAGTTCTTTTTGGCTCTCTAGACTTGCCACTGGGGAATCTAGAGACCAGTTTAAAAAATTATGAGCCTTCTGAAGAACCGTTTGATCTTGATTCTGTACCTAAGGAGATGAAATCCCAGCCACTTGCTGAGAAGAAAGGCAGTGGTAAAAAATCGAATGGGCTTGGGGCTCCTCCCGTTACCCTTGCCTCTTCTGTTGATGCTTATGAAAAGATGCTTCGCTCCATTGAAGAATTTGCTGACTTTGGGAAGCTTTTCAAGTCGTCTGCATCTTTGGAGCTTACAGAGGCAGAAACAGAGTATGCTGTCAATGTTGTCAAGCATATTTTTGATAGACATGTTGTCTTTCAATACAACTGCACAAATACAATTCCTGAGCAGCTACTAGAAAATGTCAATGTTATTGTGGATGCTTCAGAAGCAGAGGAATTCGCGGAAGTAGTGTCCAAGCCGCTCAGATCTCTTCCTTACAATTCACCTGGGCAAACCTTTGTGGCATTTGAGAAGCCAGATGGAGTCGCTGCTGTTGGAAAGTTCTCAAATATGTTGAAGTTCATTGTCAAAGAGATTGATCCGTCTACTGGCGAGACAGAGGACGATGGTGTTGAAGATGAATATCAGCTTGAGGACGTTGAGGTGGTAGCAGCAGATTACATGTTGAAAGTAGCAGTGTCTAACTTCAGGAATGCATGGGAAAGCATGGGTGAAGATGGTGAACGAGTAGATGAATATGGATTAGGTCCGAGGGGGAGCTTGGCTGAAGCTGTGCGTGCTGTCATAGATCTTTTAGGCATGCAGCCTTGTGAGGGCACAGAAGTTGTCCCAAGCAATCTGCGATCACACACATGTTTACTATCTGGTATATTCATTGGAAACGTGAGAGTACTCGCCCGTCTCTCATTTGGTCTTGATGCTTCAAGGGAGGTTGCAATGAAGCTGGTCGTTAGATCTGACGATGGAACAGTCAGTGATCTCATTCACGAGATCATCTCCAGCGGCTAA 4596 48.37 MERQSMNIAKQEGRQWQNNRRRRVSQRRRCRFWSTGQSFSGTIQTTTPLPETLLMSSSSDPPSPSSSDSDPSNPPPSPPPSTAPPPDASPPPPDSSSSSPPPPDSSPPPPPDASSPPPPDASPPPPNDTSPPPGDSSSSPPPPKDSNSNSPPSPPPPPPPPPPPPPPPPPRGSSRHSPPPPRSIDSGSSDSSSGGSAPQAVPIIVGVAVAAGFLLFAMALIFFACTRKKKKQNSNSMYFDEQSGPKGGDPYYNGRNHNWNNPSEHFVNMAPISGGTQGGGWPSPPPPPPPGLLSSDMSSNFSGPHGPPLPPPHPSVALGFNKSTFTYDELMAATSGFSPANLLGQGGFGYVHKGLLPNGKEIAVKSLKTGSGQGDREFAAEVEIISRVHHRHLVSLVGYCIAGDRKMLVYEFVPNNNLEFHLHGKGRPPLDWSTRTKIALGSAKGLAYLHEDYIFSFGVMLLELITGRRPVDTAGEMEDSLVDWSRPLCVKAMSNGNYDELADSRLEKNYDVQEMACMVACAAACIRHSARRRPKMSQVVRALEGDVSLDDLNDGVKPGQSSYFGSGTSSEYDASSYSADMKRFRKVALDSREYASSDYGGTSDEVVKNKPEKVVVKSSPFQSHPPTNFPSNSLPFRSLAASSAMAQPLVKKDDDYDDEEEYSPFLGIEKGTVLQEARVFNDPQLDTRKCSQVITKLLYLLNQGETFTKVEATEVFFGVTKLFQSRDIELRRMVYLMIKELSPSSDDVIIVTSSLMKDMNSKNDMYRANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTNPEIVKRWSNEVQEAVQSRAPLVQFHALGLLHQIRQNDRLAVNKLVSSLTRGTARSPLAQCLLVRYASQVASESAANSQTGDRPLYDFLDSCLRHKSEMVILEAARAIAELNGVTSREVTPAITVLQLFLNSPKPVLRFAAIRTLNKVAMTHPMAVTNCNIDMESLISDQNRSIATLAITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVDAIRSLCLKFPLKYRSLMNFLCNILREEGGFEYKKVIVDSIVILIRDIPEAKENGLLHLCEFIEDCEFTYLSTQILHFLGIEGPKASDPSKYIRYIYNRVHLENATVRACAVSTLAKFAVMVDSLKPRIYVLLRRCLFDSDDEVRDRATLYLKTLGADGSVLENEKDVQEVLFGSLDLPLGNLETSLKNYEPSEEPFDLDSVPKEMKSQPLAEKKGSGKKSNGLGAPPVTLASSVDAYEKMLRSIEEFADFGKLFKSSASLELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLENVNVIVDASEAEEFAEVVSKPLRSLPYNSPGQTFVAFEKPDGVAAVGKFSNMLKFIVKEIDPSTGETEDDGVEDEYQLEDVEVVAADYMLKVAVSNFRNAWESMGEDGERVDEYGLGPRGSLAEAVRAVIDLLGMQPCEGTEVVPSNLRSHTCLLSGIFIGNVRVLARLSFGLDASREVAMKLVVRSDDGTVSDLIHEIISSG 1531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4778874 4801942 - ClCG11G004470.2 Cla11g00420 284242

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00420 1531 MobiDBLite consensus disorder prediction 231 310 - -
Cla11g00420 1531 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Cla11g00420 1531 Gene3D Transferase(Phosphotransferase) domain 1 414 453 - -
Cla11g00420 1531 Pfam Adaptin N terminal region 670 1184 IPR002553 GO:0006886|GO:0016192|GO:0030117
Cla11g00420 1531 Gene3D Coatomer, gamma subunit, appendage domain 1259 1412 IPR037067 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Cla11g00420 1531 SUPERFAMILY Clathrin adaptor appendage domain 1263 1415 IPR013041 -
Cla11g00420 1531 Gene3D - 1413 1529 IPR012295 -
Cla11g00420 1531 Gene3D Phosphorylase Kinase; domain 1 315 412 - -
Cla11g00420 1531 Pfam Coatomer subunit gamma-1 C-terminal appendage platform 1414 1528 IPR032154 -
Cla11g00420 1531 ProSiteProfiles Protein kinase domain profile. 337 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00420 1531 Gene3D Transferase(Phosphotransferase) domain 1 454 553 - -
Cla11g00420 1531 MobiDBLite consensus disorder prediction 67 177 - -
Cla11g00420 1531 Gene3D - 667 960 IPR011989 -
Cla11g00420 1531 MobiDBLite consensus disorder prediction 1221 1243 - -
Cla11g00420 1531 MobiDBLite consensus disorder prediction 30 66 - -
Cla11g00420 1531 SUPERFAMILY ARM repeat 669 1233 IPR016024 -
Cla11g00420 1531 PANTHER COATOMER SUBUNIT GAMMA 645 1531 - -
Cla11g00420 1531 Pfam Coatomer gamma subunit appendage platform subdomain 1266 1411 IPR013040 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Cla11g00420 1531 MobiDBLite consensus disorder prediction 1 198 - -
Cla11g00420 1531 MobiDBLite consensus disorder prediction 1221 1254 - -
Cla11g00420 1531 SUPERFAMILY Subdomain of clathrin and coatomer appendage domain 1416 1527 IPR009028 GO:0006886|GO:0016192|GO:0030117
Cla11g00420 1531 MobiDBLite consensus disorder prediction 179 198 - -
Cla11g00420 1531 SUPERFAMILY Protein kinase-like (PK-like) 312 543 IPR011009 -
Cla11g00420 1531 PANTHER COATOMER SUBUNIT GAMMA 645 1531 IPR017106 -
Cla11g00420 1531 Pfam Protein tyrosine and serine/threonine kinase 342 452 IPR001245 GO:0004672|GO:0006468
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00420 K17267 COPG; coatomer subunit gamma - csv:101213217 1662.89
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla11g00420 Cla-Chr11:4778874 Cla07g00865 Cla-Chr7:24038856 1.13E-120 dispersed
Cla01g00248 Cla-Chr1:2511127 Cla11g00420 Cla-Chr11:4778874 2.57E-17 transposed
Cla02g00214 Cla-Chr2:2208769 Cla11g00420 Cla-Chr11:4778874 7.99E-17 transposed
Cla07g01347 Cla-Chr7:30626947 Cla11g00420 Cla-Chr11:4778874 5.39E-07 transposed
Cla11g00420 Cla-Chr11:4778874 Cla02g00528 Cla-Chr2:5442824 0 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cla11g00230 CCT 146 498 Trihelix Transcription Factor Family AT1G12040 65.1 2.6e-44 177.6
Cla05g00515 . 38 363 Trihelix Transcription Factor Family AT1G12040 58.8 7.4e-39 159.5
Cla06g01020 CCT 54 228 Trihelix Transcription Factor Family AT1G12040 63.4 6.9e-37 152.9
Cla11g00230 CCT 128 503 Trihelix Transcription Factor Family AT4G18670 80.4 6.3e-66 249.6
Cla06g01020 CCT 33 401 Trihelix Transcription Factor Family AT4G18670 81.6 3.4e-64 243.8
Cla06g00331 . 26 219 Trihelix Transcription Factor Family AT4G18670 58.5 1.1e-38 159.1
Cla05g00515 . 32 365 Trihelix Transcription Factor Family AT4G18670 64.5 1.0e-36 152.5
Cla06g00331 . 9 414 Trihelix Transcription Factor Family AT3G19020 62.0 7.1e-55 213.0
Cla06g01020 CCT 35 399 Trihelix Transcription Factor Family AT3G19020 73.6 1.5e-41 168.7
Cla11g00230 CCT 123 320 Trihelix Transcription Factor Family AT3G19020 69.5 1.1e-39 162.5
Cla05g01996 . 70 227 Trihelix Transcription Factor Family AT3G19020 74.1 3.3e-36 151.0
Cla06g00331 . 62 395 Trihelix Transcription Factor Family AT1G49490 66.1 2.3e-44 177.9
Cla06g01020 CCT 65 402 Trihelix Transcription Factor Family AT1G49490 74.0 1.2e-40 165.6
Cla11g00230 CCT 157 489 Trihelix Transcription Factor Family AT1G49490 73.3 1.5e-40 165.2
Cla06g00331 . 25 395 Trihelix Transcription Factor Family AT2G15880 66.5 3.9e-61 233.4
Cla06g01020 CCT 35 406 Trihelix Transcription Factor Family AT2G15880 67.3 1.6e-41 168.3
Cla11g00230 CCT 128 489 Trihelix Transcription Factor Family AT2G15880 66.3 3.8e-40 163.7
Cla06g00331 . 1 400 Trihelix Transcription Factor Family AT4G33970 63.2 1.9e-57 221.1
Cla06g01020 CCT 35 402 Trihelix Transcription Factor Family AT4G33970 67.5 2.5e-36 151.0
Cla08g01699 . 1 196 Trihelix Transcription Factor Family AT1G13450 63.3 4.4e-67 251.5
Cla10g02096 CCT 50 301 Trihelix Transcription Factor Family AT5G01380 57.7 4.1e-50 195.7
Cla08g00363 . 64 551 Trihelix Transcription Factor Family AT1G33240 50.5 2.7e-76 283.5
Cla11g00230 CCT 128 503 Trihelix Transcription Factor Family AT4G18670 80.4 6.3e-66 249.6
Cla06g01020 CCT 33 401 Trihelix Transcription Factor Family AT4G18670 81.6 3.4e-64 243.8
Cla06g00331 . 26 219 Trihelix Transcription Factor Family AT4G18670 58.5 1.1e-38 159.1
Cla05g00515 . 32 365 Trihelix Transcription Factor Family AT4G18670 64.5 1.0e-36 152.5
Cla06g00331 . 1 400 Trihelix Transcription Factor Family AT4G33970 63.2 1.9e-57 221.1
Cla06g01020 CCT 35 402 Trihelix Transcription Factor Family AT4G33970 67.5 2.5e-36 151.0
Cla08g00363 . 59 552 Trihelix Transcription Factor Family AT1G76880 57.3 4.3e-114 409.1
Cla08g00365 . 51 475 Trihelix Transcription Factor Family AT1G76880 55.6 1.2e-87 321.2
Cla10g01831 . 102 368 Trihelix Transcription Factor Family AT3G10000 53.5 1.6e-63 240.7
Cla06g00331 . 9 414 Trihelix Transcription Factor Family AT3G19020 62.0 7.1e-55 213.0
Cla06g01020 CCT 35 399 Trihelix Transcription Factor Family AT3G19020 73.6 1.5e-41 168.7
Cla11g00230 CCT 123 320 Trihelix Transcription Factor Family AT3G19020 69.5 1.1e-39 162.5
Cla05g01996 . 70 227 Trihelix Transcription Factor Family AT3G19020 74.1 3.3e-36 151.0
Cla06g00331 . 62 395 Trihelix Transcription Factor Family AT1G49490 66.1 2.3e-44 177.9
Cla06g01020 CCT 65 402 Trihelix Transcription Factor Family AT1G49490 74.0 1.2e-40 165.6
Cla11g00230 CCT 157 489 Trihelix Transcription Factor Family AT1G49490 73.3 1.5e-40 165.2
Cla05g02353 . 273 659 Trihelix Transcription Factor Family AT1G68690 61.9 5.1e-132 468.8
Cla11g00502 . 314 740 Trihelix Transcription Factor Family AT1G68690 55.8 2.2e-127 453.4
Cla05g02542 . 429 768 Trihelix Transcription Factor Family AT1G68690 65.3 1.5e-123 440.7
Cla06g00852 . 251 545 Trihelix Transcription Factor Family AT1G68690 64.4 4.5e-112 402.5
Cla11g00221 . 284 572 Trihelix Transcription Factor Family AT1G68690 64.4 5.8e-112 402.1
Cla07g00865 . 312 620 Trihelix Transcription Factor Family AT1G68690 57.1 7.9e-101 365.2
Cla07g01296 . 393 670 Trihelix Transcription Factor Family AT1G68690 55.3 3.6e-85 313.2
Cla07g00141 . 359 639 Trihelix Transcription Factor Family AT1G68690 57.0 6.1e-85 312.4
Cla10g01096 . 364 652 Trihelix Transcription Factor Family AT1G68690 55.5 2.3e-84 310.5
Cla03g01496 . 778 1059 Trihelix Transcription Factor Family AT1G68690 55.4 1.7e-82 304.3
Cla09g00062 . 491 772 Trihelix Transcription Factor Family AT1G68690 54.4 5.0e-79 292.7
Cla10g01964 . 79 386 Trihelix Transcription Factor Family AT1G68690 51.6 4.2e-78 289.7
Cla05g00626 . 74 358 Trihelix Transcription Factor Family AT1G68690 51.4 3.6e-77 286.6
Cla11g01825 CCT,ECH 113 394 Trihelix Transcription Factor Family AT1G68690 50.9 3.9e-76 283.1
Cla02g01354 . 85 376 Trihelix Transcription Factor Family AT1G68690 50.5 1.5e-75 281.2
Cla05g02353 . 273 605 Trihelix Transcription Factor Family AT1G26150 62.7 1.3e-111 401.0
Cla11g00502 . 279 660 Trihelix Transcription Factor Family AT1G26150 55.6 6.3e-111 398.7
Cla05g02542 . 472 714 Trihelix Transcription Factor Family AT1G26150 71.2 1.5e-99 360.9
Cla11g00221 . 284 518 Trihelix Transcription Factor Family AT1G26150 68.9 3.0e-97 353.2
Cla06g00852 . 248 491 Trihelix Transcription Factor Family AT1G26150 66.7 8.3e-95 345.1
Cla07g00865 . 312 566 Trihelix Transcription Factor Family AT1G26150 60.9 3.6e-90 329.7
Cla03g01496 . 771 1008 Trihelix Transcription Factor Family AT1G26150 60.1 5.4e-78 289.3
Cla10g01096 . 365 601 Trihelix Transcription Factor Family AT1G26150 60.1 1.6e-74 277.7
Cla10g01964 . 70 326 Trihelix Transcription Factor Family AT1G26150 54.9 1.6e-74 277.7
Cla07g01296 . 386 621 Trihelix Transcription Factor Family AT1G26150 55.5 2.1e-74 277.3
Cla02g00525 . 126 370 Trihelix Transcription Factor Family AT1G26150 53.2 4.4e-72 269.6
Cla09g00062 . 465 721 Trihelix Transcription Factor Family AT1G26150 53.3 1.7e-71 267.7
Cla08g01583 . 581 810 Trihelix Transcription Factor Family AT1G26150 53.5 6.4e-71 265.8
Cla11g00084 . 691 920 Trihelix Transcription Factor Family AT1G26150 54.3 3.2e-70 263.5
Cla02g01803 . 175 404 Trihelix Transcription Factor Family AT1G26150 55.6 9.2e-70 261.9
Cla05g00626 . 72 305 Trihelix Transcription Factor Family AT1G26150 55.6 7.8e-69 258.8
Cla06g01298 CCT 18 256 Trihelix Transcription Factor Family AT1G26150 51.0 7.8e-69 258.8
Cla02g01354 . 85 316 Trihelix Transcription Factor Family AT1G26150 56.0 1.0e-68 258.5
Cla11g01825 CCT,ECH 113 342 Trihelix Transcription Factor Family AT1G26150 55.2 2.3e-68 257.3
Cla09g02192 . 182 411 Trihelix Transcription Factor Family AT1G26150 54.7 2.3e-68 257.3
Cla01g01655 . 174 403 Trihelix Transcription Factor Family AT1G26150 50.9 3.9e-68 256.5
Cla09g02204 . 657 912 Trihelix Transcription Factor Family AT1G26150 51.6 5.1e-68 256.1
Cla07g00254 . 74 309 Trihelix Transcription Factor Family AT1G26150 52.5 1.1e-67 255.0
Cla08g00940 CCT,ECH 106 335 Trihelix Transcription Factor Family AT1G26150 56.6 1.9e-67 254.2
Cla06g00395 . 167 395 Trihelix Transcription Factor Family AT1G26150 54.3 4.3e-67 253.1
Cla07g01184 . 15 257 Trihelix Transcription Factor Family AT1G26150 50.6 4.3e-67 253.1
Cla09g00842 . 110 343 Trihelix Transcription Factor Family AT1G26150 52.6 2.1e-66 250.8
Cla06g01266 . 282 509 Trihelix Transcription Factor Family AT1G26150 50.4 1.5e-64 244.6
Cla05g00149 . 186 404 Trihelix Transcription Factor Family AT1G26150 50.9 3.4e-64 243.4
Cla04g00878 . 58 295 Trihelix Transcription Factor Family AT1G26150 51.3 7.6e-64 242.3
Cla11g00478 . 282 521 Trihelix Transcription Factor Family AT1G26150 50.2 9.9e-64 241.9
Cla10g01256 . 57 291 Trihelix Transcription Factor Family AT1G26150 50.6 1.3e-63 241.5
Cla05g02357 . 295 523 Trihelix Transcription Factor Family AT1G26150 50.2 1.3e-63 241.5
Cla05g00864 . 1018 1247 Trihelix Transcription Factor Family AT1G26150 50.9 3.8e-63 240.0
Cla08g00308 . 292 524 Trihelix Transcription Factor Family AT1G26150 50.6 1.9e-62 237.7
Cla09g01478 . 304 537 Trihelix Transcription Factor Family AT1G26150 50.9 3.2e-62 236.9
Cla03g00479 CCT 340 571 Trihelix Transcription Factor Family AT1G26150 51.3 5.4e-62 236.1
Cla05g02542 . 419 664 Trihelix Transcription Factor Family AT1G23540 68.0 5.1e-90 328.9
Cla06g00852 . 246 441 Trihelix Transcription Factor Family AT1G23540 69.4 3.9e-74 276.2
Cla11g00221 . 284 468 Trihelix Transcription Factor Family AT1G23540 69.2 3.3e-73 273.1
Cla07g00865 . 309 517 Trihelix Transcription Factor Family AT1G23540 64.6 3.7e-72 269.6
Cla05g02353 . 369 555 Trihelix Transcription Factor Family AT1G23540 67.9 1.2e-70 264.6
Cla11g00502 . 398 610 Trihelix Transcription Factor Family AT1G23540 61.0 2.9e-69 260.0
Cla09g02192 . 169 361 Trihelix Transcription Factor Family AT1G23540 52.6 6.5e-53 205.7
Cla02g01803 . 147 354 Trihelix Transcription Factor Family AT1G23540 50.7 1.9e-52 204.1
Cla02g00525 . 142 321 Trihelix Transcription Factor Family AT1G23540 53.9 9.4e-52 201.8
Cla01g01655 . 163 353 Trihelix Transcription Factor Family AT1G23540 51.6 2.1e-51 200.7
Cla08g01583 . 570 760 Trihelix Transcription Factor Family AT1G23540 50.5 2.7e-51 200.3
Cla02g01451 . 155 345 Trihelix Transcription Factor Family AT1G23540 51.6 3.6e-51 199.9
Cla03g01496 . 765 958 Trihelix Transcription Factor Family AT1G23540 51.8 3.6e-51 199.9
Cla11g00478 . 294 470 Trihelix Transcription Factor Family AT1G23540 57.5 7.9e-51 198.7
Cla10g02161 . 607 789 Trihelix Transcription Factor Family AT1G23540 52.5 1.4e-50 198.0
Cla10g01257 . 609 805 Trihelix Transcription Factor Family AT1G23540 50.3 2.3e-50 197.2
Cla06g01266 . 281 458 Trihelix Transcription Factor Family AT1G23540 55.0 6.7e-50 195.7
Cla07g00141 . 359 538 Trihelix Transcription Factor Family AT1G23540 53.9 1.1e-49 194.9
Cla05g02357 . 296 472 Trihelix Transcription Factor Family AT1G23540 54.7 1.5e-49 194.5
Cla07g01296 . 385 571 Trihelix Transcription Factor Family AT1G23540 50.8 1.5e-49 194.5
Cla11g00420 . 315 452 Trihelix Transcription Factor Family AT1G23540 65.9 2.0e-49 194.1
Cla06g00395 . 154 345 Trihelix Transcription Factor Family AT1G23540 51.0 2.0e-49 194.1
Cla11g01825 CCT,ECH 113 293 Trihelix Transcription Factor Family AT1G23540 53.0 5.7e-49 192.6
Cla03g01510 . 376 561 Trihelix Transcription Factor Family AT1G23540 50.5 5.7e-49 192.6
Cla01g00725 . 671 847 Trihelix Transcription Factor Family AT1G23540 53.1 7.4e-49 192.2
Cla09g00062 . 490 671 Trihelix Transcription Factor Family AT1G23540 52.2 1.3e-48 191.4
Cla09g02204 . 683 860 Trihelix Transcription Factor Family AT1G23540 51.7 6.3e-48 189.1
Cla08g00308 . 292 472 Trihelix Transcription Factor Family AT1G23540 53.6 1.8e-47 187.6
Cla01g02327 . 341 520 Trihelix Transcription Factor Family AT1G23540 50.6 2.4e-47 187.2
Cla05g00864 . 1018 1193 Trihelix Transcription Factor Family AT1G23540 51.7 5.3e-47 186.0
Cla06g01573 . 966 1144 Trihelix Transcription Factor Family AT1G23540 50.3 5.3e-47 186.0
Cla10g00875 . 278 458 Trihelix Transcription Factor Family AT1G23540 53.6 7.0e-47 185.7
Cla10g01096 . 364 551 Trihelix Transcription Factor Family AT1G23540 52.7 9.1e-47 185.3
Cla09g01478 . 304 484 Trihelix Transcription Factor Family AT1G23540 53.6 2.6e-46 183.7
Cla05g01002 . 772 947 Trihelix Transcription Factor Family AT1G23540 52.8 3.4e-46 183.3
Cla09g00322 . 800 975 Trihelix Transcription Factor Family AT1G23540 50.6 3.4e-46 183.3
Cla01g01557 . 876 1055 Trihelix Transcription Factor Family AT1G23540 51.7 5.9e-46 182.6
Cla07g00984 . 526 703 Trihelix Transcription Factor Family AT1G23540 51.1 3.8e-45 179.9
Cla08g01699 . 1 406 Trihelix Transcription Factor Family AT3G25990 62.6 5.4e-139 491.1
Cla11g00230 CCT 146 498 Trihelix Transcription Factor Family AT1G12040 65.1 2.6e-44 177.6
Cla05g00515 . 38 363 Trihelix Transcription Factor Family AT1G12040 58.8 7.4e-39 159.5
Cla06g01020 CCT 54 228 Trihelix Transcription Factor Family AT1G12040 63.4 6.9e-37 152.9
Cla10g02096 CCT 50 304 Trihelix Transcription Factor Family AT2G38250 65.1 1.3e-55 213.8
Cla11g00502 . 301 819 Trihelix Transcription Factor Family AT5G38560 60.0 4.4e-163 572.0
Cla05g02353 . 292 717 Trihelix Transcription Factor Family AT5G38560 60.1 7.3e-142 501.5
Cla05g02542 . 463 838 Trihelix Transcription Factor Family AT5G38560 63.5 9.2e-137 484.6
Cla11g00221 . 222 627 Trihelix Transcription Factor Family AT5G38560 55.4 3.7e-122 436.0
Cla06g00852 . 235 611 Trihelix Transcription Factor Family AT5G38560 58.0 6.0e-120 428.7
Cla07g00865 . 316 668 Trihelix Transcription Factor Family AT5G38560 58.7 3.5e-112 402.9
Cla10g01096 . 368 683 Trihelix Transcription Factor Family AT5G38560 52.2 2.8e-85 313.5
Cla07g01296 . 392 670 Trihelix Transcription Factor Family AT5G38560 53.7 4.5e-83 306.2
Cla03g01496 . 778 1063 Trihelix Transcription Factor Family AT5G38560 54.6 4.2e-81 299.7
Cla07g00141 . 359 653 Trihelix Transcription Factor Family AT5G38560 52.0 1.8e-79 294.3
Cla09g00062 . 491 787 Trihelix Transcription Factor Family AT5G38560 50.8 1.9e-78 290.8
Cla10g01964 . 95 384 Trihelix Transcription Factor Family AT5G38560 50.3 1.3e-74 278.1
Cla09g02192 . 181 466 Trihelix Transcription Factor Family AT5G38560 50.2 1.7e-74 277.7
Cla11g00221 . 291 652 Trihelix Transcription Factor Family AT4G32710 64.1 8.7e-125 444.9
Cla06g00852 . 239 623 Trihelix Transcription Factor Family AT4G32710 60.6 5.4e-119 425.6
Cla05g02542 . 436 840 Trihelix Transcription Factor Family AT4G32710 54.0 1.1e-108 391.3
Cla07g00865 . 319 653 Trihelix Transcription Factor Family AT4G32710 60.2 3.7e-107 386.3
Cla05g02353 . 375 664 Trihelix Transcription Factor Family AT4G32710 62.5 3.3e-100 363.2
Cla03g01496 . 778 1064 Trihelix Transcription Factor Family AT4G32710 51.0 4.7e-78 289.7
Cla11g01825 CCT,ECH 113 399 Trihelix Transcription Factor Family AT4G32710 50.3 5.5e-71 266.2
Cla05g02542 . 419 828 Trihelix Transcription Factor Family AT1G70460 70.3 6.8e-159 558.1
Cla11g00221 . 283 635 Trihelix Transcription Factor Family AT1G70460 64.6 9.6e-129 458.0
Cla11g00502 . 316 786 Trihelix Transcription Factor Family AT1G70460 52.5 1.4e-127 454.1
Cla05g02353 . 369 714 Trihelix Transcription Factor Family AT1G70460 64.0 7.6e-126 448.4
Cla06g00852 . 245 594 Trihelix Transcription Factor Family AT1G70460 64.6 1.3e-125 447.6
Cla07g00865 . 309 675 Trihelix Transcription Factor Family AT1G70460 61.2 4.8e-120 429.1
Cla07g01296 . 385 670 Trihelix Transcription Factor Family AT1G70460 51.4 1.2e-81 301.6
Cla03g01510 . 375 664 Trihelix Transcription Factor Family AT1G70460 50.3 4.4e-81 299.7
Cla03g01496 . 773 1063 Trihelix Transcription Factor Family AT1G70460 51.5 3.1e-79 293.5
Cla10g01096 . 364 656 Trihelix Transcription Factor Family AT1G70460 53.0 7.0e-79 292.4
Cla02g01803 . 164 461 Trihelix Transcription Factor Family AT1G70460 50.2 5.9e-78 289.3
Cla07g00141 . 359 643 Trihelix Transcription Factor Family AT1G70460 52.1 8.5e-77 285.4
Cla09g00062 . 490 776 Trihelix Transcription Factor Family AT1G70460 50.3 3.6e-75 280.0
Cla06g00395 . 156 432 Trihelix Transcription Factor Family AT1G70460 50.5 3.7e-72 270.0
Cla06g00331 . 25 395 Trihelix Transcription Factor Family AT2G15880 66.5 3.9e-61 233.4
Cla06g01020 CCT 35 406 Trihelix Transcription Factor Family AT2G15880 67.3 1.6e-41 168.3
Cla11g00230 CCT 128 489 Trihelix Transcription Factor Family AT2G15880 66.3 3.8e-40 163.7
Cla10g01831 . 102 368 Trihelix Transcription Factor Family AT5G03680 59.5 4.2e-77 286.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001661 4 2 3 0 2 2 3 2 2 2 2 2 3 2 2 4 2 3 4 2 2 2 2 2 2 2 2 4 3 1 70
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80923 PF01602 Adaptin_N 6.90E-130 CL0020 Cla PK
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cla11g00420 Cla_Chr11 FPKM 8.493353 10.165956 13.754157 13.290368 58.31144 51.378784 60.763138 7.821683 7.127228 7.958827