Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla11g00459 | ATGAATGCGAATAGTCCGCGATTTCAATCGTTTGGTCAAACTGAGATTAACTGGGACAAGCTTGATAAAGCGAAATTTTATGGCGTAGGAGCTGGTCTCTTTACAGGAATTACAGTTGCACTGTACCCTGTTTCTGTTGTAAAAACAAGGATGCAGGTTGCTGTAAAGGATTCTGCCGAGAAAAATGCCCTGTCTGTTATTAAGGGCTTACTGAAGAATGACGGGGTTCCTGGTCTTTACAGAGGGTTTGGCACAGTAATAACTGGTGCAATTCCTGCCAGGATTATCTTTCTTACTGCTTTGGAGACAACCAAAGTGGGAGCCTATAAACTGGTTGAGCCATTTAAATTTTCTGAACCTACACAGGCTGCTATGGCAAATGGGTTAGCTGGCATGACTGCCTCACTTTTTTCTCAAGCTGTTTTTGTTCCAATTGATGTGATTAGTCAGAAGCTCATGGTTCAAGGATACTCAGGAAATACAAGATATAATGGGGGTTTAGATGTTGCTCGTAAACTGATAAAGTCTAATGGGATCCGGGGATTGTATAAAGGTTTTGGGTTATCTGTTATGACCTACTCTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGTGCAAGTCAACGCATCATCTGGAGGCACTGTAAAGTGCATCTCTGTATGGATTTGTTGAGCTTTATATATAAGTGTCAAAACTCTGCTTCTGAGAAATTTGCTCCCAGCCATACCCAACTTATTTCAGTTCAAGCTGCGGGTGGAATAATTGCAGGTGCAACAGCTTCCTGCATTACAACACCTTTGGACACCATAAAGACTCGCTTACAGGTACTTACTACCCTAGTTGACGTCAAACTTAATTCTTTTCACTTTCTCACTGTGATGGGTGATAAAGGGAAGACAGCAAGACAAATTGTTGAAAGCTTGATCGCTGAGGATGGATGGAAAGGTTTATATAGGGGGCTGGGTCCTCGGTTTTTCAGCATGTCAGCCTGGGGAACCTCGATGATATTGGCTTACGAGTACTTGAGTATGGACTTCTCACTATTATAG | 1050 | 42.48 | MNANSPRFQSFGQTEINWDKLDKAKFYGVGAGLFTGITVALYPVSVVKTRMQVAVKDSAEKNALSVIKGLLKNDGVPGLYRGFGTVITGAIPARIIFLTALETTKVGAYKLVEPFKFSEPTQAAMANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSGNTRYNGGLDVARKLIKSNGIRGLYKGFGLSVMTYSPSSAVWWASYGASQRIIWRHCKVHLCMDLLSFIYKCQNSASEKFAPSHTQLISVQAAGGIIAGATASCITTPLDTIKTRLQVLTTLVDVKLNSFHFLTVMGDKGKTARQIVESLIAEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLSMDFSLL | 349 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 5202512 | 5209376 | - | ClCG11G004900.2 | Cla11g00459 | 284281 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla11g00459 | 349 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J | 1 | 343 | - | - | |
Cla11g00459 | 349 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 19 | 107 | IPR018108 | - | |
Cla11g00459 | 349 | Gene3D | Mitochondrial carrier domain | 26 | 347 | IPR023395 | - | |
Cla11g00459 | 349 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 244 | 345 | IPR018108 | - | |
Cla11g00459 | 349 | PRINTS | Mitochondrial carrier protein signature | 183 | 201 | IPR002067 | GO:0055085 | |
Cla11g00459 | 349 | PRINTS | Mitochondrial carrier protein signature | 39 | 53 | IPR002067 | GO:0055085 | |
Cla11g00459 | 349 | PRINTS | Mitochondrial carrier protein signature | 253 | 275 | IPR002067 | GO:0055085 | |
Cla11g00459 | 349 | Pfam | Mitochondrial carrier protein | 124 | 212 | IPR018108 | - | |
Cla11g00459 | 349 | Pfam | Mitochondrial carrier protein | 28 | 106 | IPR018108 | - | |
Cla11g00459 | 349 | Pfam | Mitochondrial carrier protein | 250 | 342 | IPR018108 | - | |
Cla11g00459 | 349 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 122 | 210 | IPR018108 | - | |
Cla11g00459 | 349 | SUPERFAMILY | Mitochondrial carrier | 19 | 342 | IPR023395 | - | |
Cla11g00459 | 349 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN | 1 | 343 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla05g00729 | Cla-Chr5:6913770 | Cla11g00459 | Cla-Chr11:5202512 | 7.12E-92 | dispersed | |
Cla09g00079 | Cla-Chr9:769376 | Cla11g00459 | Cla-Chr11:5202512 | 2.67E-84 | dispersed | |
Cla11g00459 | Cla-Chr11:5202512 | Cla04g00684 | Cla-Chr4:21617124 | 1.90E-09 | dispersed | |
Cla11g00459 | Cla-Chr11:5202512 | Cla05g01857 | Cla-Chr5:30443758 | 3.31E-77 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla11g00459 | K15121 | - | csv:101206140 | 565.459 |