Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00461 ATGGCGTTGGCCATGGTGATTCTTGCTCTGTTTCTACTCCTCTGTTTTTGCGCTGCTTTGCTACGATGGAATGAAGTTCGATATAGCAAAAAGGGGTTGCCTCCAGGTACAATGGGATGGCCTGTTTTTGGGGAAACTACTGAGTTTCTTAAACAAGGTCCAAACTTTATGAAATCTCAAAGAGCGAGGTATGGGAGCATTTTCAAGTCCCATATTTTGGGGTGTCCTACGATTGTTTCTATGGATCCTGAGGTTAATAGATATGTTTTAATGAATGAATCAAAAGGGCTTGTCCCTGGTTACCCTCAATCCATGCTTGACATACTTGGAAAATGCAATATCGCCGCCGTCCATGGCGGCGCTCACAAGCTCATGAGAGGTGCTCTGCTTGCTATTGTTAGCCCCACCATGATTAAAGACCGTCTTCTTCCTAAAATCGATGACTTTATGCGATCTCATTTGAGGAATTGGGATCCCCAAATCATTGATATCCAAGAAAAGACTAAAGAGATGGCTCTCCGGTCGTCTTTGAAGCAGATTGCTGGAATCGAATCCGGTCCGTTGTCAGAATCTTTCATCCCGGAGTTCTTCAAGCTCGTCCTCGGCACCCTCTCGCTCCCCATCGATCTTCCCGGCACGAACTACCGCCGAGGAATTCAGGCCAGGAAGAACATAATAAAGCTATTGCAGCAGCTGATAAATGAGAGAAGAGATTCAAAGATACAAAAGGATGACATGCTTGGGTATTTTATGAGTGAGGAGAACAAATATAAGCTAAACGATGAAGAGATTATTGATCAAATCATCACTCTATTGTACTCTGGCTATGAAACTGTTTCAACAACTTCTATGATGGCTGTAAAGTTTCTCCATGATCATCCCAAAGTTCTTCAGCAACTCAGAGAAGAGCATTTGGCAATCAGAGAGAAGAAAAATCCTGAGGACCCCATTGATTGGGATGATCTTAAAGCAATGAAGTTCACTCGTGCGGTGATAAATGAAACATCAAGGCTGGCCACTATTGTTAATGGGGTTTTGAGGAAAACTACAAAGGACATGGAACTAAATGGCTTTCTCATTCCAAAAGGATGGAGGATTTATGTGTATACTAGAGAGATAAACTATGACCCTTTTCTCTATTCTGAACCATTCACCTTCAACCCTTGGAGATGGCTGGACAAAAACTTAGAGTCCCATAATTACTTCTTCATCTTTGGAGGTGGAACTAGACATTGTCCTGGCAAAGAATTGGGAATTGCAGAGATTTCTACTTTTTTACATTACTTTGTAACTAAATACAGATGGGAAGAAGTTGGAGGAGATAAGCTCTTGAAATTTCCAAGAGTGGAGGCTCCAAGTGGGTTCCACATTAGGGTTTCATCTTACTGA 1389 42.19 MALAMVILALFLLLCFCAALLRWNEVRYSKKGLPPGTMGWPVFGETTEFLKQGPNFMKSQRARYGSIFKSHILGCPTIVSMDPEVNRYVLMNESKGLVPGYPQSMLDILGKCNIAAVHGGAHKLMRGALLAIVSPTMIKDRLLPKIDDFMRSHLRNWDPQIIDIQEKTKEMALRSSLKQIAGIESGPLSESFIPEFFKLVLGTLSLPIDLPGTNYRRGIQARKNIIKLLQQLINERRDSKIQKDDMLGYFMSEENKYKLNDEEIIDQIITLLYSGYETVSTTSMMAVKFLHDHPKVLQQLREEHLAIREKKNPEDPIDWDDLKAMKFTRAVINETSRLATIVNGVLRKTTKDMELNGFLIPKGWRIYVYTREINYDPFLYSEPFTFNPWRWLDKNLESHNYFFIFGGGTRHCPGKELGIAEISTFLHYFVTKYRWEEVGGDKLLKFPRVEAPSGFHIRVSSY 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5269868 5272539 + ClCG11G004920.1 Cla11g00461 284283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00461 462 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 405 414 IPR017972 GO:0005506|GO:0016705
Cla11g00461 462 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00461 462 PRINTS P450 superfamily signature 330 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00461 462 PRINTS P450 superfamily signature 403 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00461 462 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00461 462 PANTHER CYTOCHROME P450 26 7 460 - -
Cla11g00461 462 PANTHER CYTOCHROME P450 FAMILY PROTEIN 7 460 - -
Cla11g00461 462 SUPERFAMILY Cytochrome P450 27 442 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00461 462 Pfam Cytochrome P450 34 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00461 462 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00461 462 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00461 462 PRINTS E-class P450 group I signature 283 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00461 462 PRINTS E-class P450 group I signature 329 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00461 462 PRINTS E-class P450 group I signature 369 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00461 462 PRINTS E-class P450 group I signature 402 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00461 462 PRINTS E-class P450 group I signature 412 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00461 462 Gene3D Cytochrome P450 24 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01299 Cla-Chr7:30128051 Cla11g00461 Cla-Chr11:5269868 4.05E-97 dispersed
Cla11g00461 Cla-Chr11:5269868 Cla05g02039 Cla-Chr5:32102232 4.17E-82 dispersed
Cla11g00461 Cla-Chr11:5269868 Cla09g00055 Cla-Chr9:546635 5.80E-89 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00461 K09590 - csv:101206858 877.47