Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla11g00502 | ATGGCTTCACCTTCTCCAAGTATTTCTCCTCCTGAGAATCCATCAGATTCCTCAGTTTCTTCACCTCCTTCTCCTTCTTCTCCGGTGGAGTCTGCAACCTCTCCCTCGTCTCCCACATCTTCTGAGCCTAATCAGACTGGTGAACCTCCTTCATCACTTTCTAGTTCTTCAGCTCCACCTCCTCAGTCACCACCGGCTGTTCCTGATGCTCCTCCTCCTTCTCCTCCATTGTCTCCTCCTCCATTGACAGCATCACCACCTGCAACACCAGCATCCCCACCTCCTTCTCCCCCTGCTGGTTCACCACCTTCACCTCCCCAATCTTCGCCCTCGCCGCCATCACCTCCGCCACCTTCAACACCATCCTCCCCACCACCACCACCACCTTCAACATCAACCTCTCCACCACCACCTTCCACAACATCACCACCACCTTCCTCTGCATCACCACCTCCCCCAGAGAGATCAACTACCTCTCCTCCTCCTCAAACTTCACCTCCCCCTCCTGATTTATCACCTCCACCGCCACCAGCAGCAGCAGATGGTTCTCCACCTCCTGCATCCAATCCTAGACCTCCATCTTCAACGCCCTCTCCCCCTCCCCCTGATACAATTTCACCTTCTCCACCTCCACCAACTAATGTCCCAACACCACCTTCATCAACAGGAGAATCACCTAAAGTATCTCCCCCATCCCACAAGGCTTCTCCTCCTCCTTCTGATTCTCAAACTCCACCTTCAGATAACTCCCCTCCACCAAGATCCACAGTACCATCACCTCCTTCTTCAGTTCCTTCATCGTCTGCTCCTCCTCCAGTTAGTGACCCTGGTTCTCCAACTAATTCATCTGGTGGAACTCCTGTTACCCCTCCAACTTCTGTTACACCAGAACGACCAATTGCAACAATCAATGGTACCAATGTTACAGCAAATAACTCAACCACTAGCAAGGGGGGTTTCAGCACTGGAGCATCTGTGGCAGTTGGCAGTGTGGTTGGTGTTCTAGTGCTGAGTCTTGTTATCATGGCTCTGTGGTTTGTTCAGAAACGGAAGAGAAGAAAGAAGAATATCCCTTACACCATAGCTTCTCCTTTTTCCTCGCAAAACTCAGCTCCTGTAGTAGGAAGTCGTACTGATAGTGATTTCAAGTATTCATCATCGGAAGGAGGTGGAGTAGGTAATTCGAGATCGTTTGCTTATGATGACCTACACCAGGCAACAAGTGGGTTTTCATCGAATAATCTTTTGGGGGAAGGTGGATTTGGTTGTGTGTATAAAGGCACCCTTGCAGATGGAAGAGACGTGGCTGTTAAACAACTTAAAGTGGGTGGTGGACAGGGAGAACGAGAGTTCAGAGCCGAAGTTGAGATTATTAGCCGAGTACACCATCGACATTTGGTTTCCCTGGTTGGTTACTGTATCTCTGATTATCAAAGATTGCTTGTCTACGATTATGTTCCAAACAATACCCTTCATTACCATCTACACGGGGAGAACAGGCCAGTTTTGGCTTGGGCTACACGTGTTCGGATTGCTGCTGGTGCAGCTCGTGGAATTGCTTACCTACATGAAGATTGTAAGTTTCTCCCTTTGGACATTCTGCAAACTTGGAGGTTTCCAACTAATGCTGTAGGTTTAGGTAGTAATCCGTTGAAATTTGTTGAGGCGTGCATAAAGTCGGGTCATCCACGCATTATTCACAGGGATATTAAATCGTCTAACATTCTGCTTGATATCAACTTTGAAGCTCAGGTCGCAGATTTTGGGCTTGCTAAATTGGCACTGGATTCACATACTCATGTAACAACTCGTGTTATGGGAACCTTTGGATACATGGCCCCAGAGTACGCAACGAGTGGGAAATTGACAGATAAATCTGATGTTTTCTCTTTCGGGGTTGTACTTTTGGAGTTAATTACTGGTCGCAAGCCTGTGGATTCTTCTCAGCCTCTAGGGGATGAGAGCTTAGTTGAATGGATTCTTAGTTTCTACATTAATCCCAACACTCTTAGATCTTGGTTGAGGTTGTTCTTGACTGAACAAATGGGGCTGTTGGCTCGACCCTTGCTTGCACAAGCCATTGAGGATGAGAATTTTGAAGAACTGGTGGATCCAAGGCTAGACAACAATTATGTAGACAGAGAAATGTTCCGGATGATCGAAGCAGCCGCTGCTTGTGTTCGTCATTCGGCAGTAAAGAGGCCAAGAATGAGTCAGGTGGTGAGAGCTCTAGACTCTTTAGATGAAATGTCAGATCTTGCAAATGGGGTGAAACCTGGGCAGAGTGGAGTGTTTGATTCAGCTGAACAATCTGCTCAGATTAGAATGTTTCAGAGAATGGCTTTTGGCAGTCAAGATTATAGTTACGGTTATTCCGAACGAGATCGCAGTCGAAGTTATAGTCAAAGTCATAGTAGCTGGAGTAGAGAATCCAGAGATCAAAGTCCCTCGGCGCCTATGAATCGATCCCGGCAATGGAACATCTGA | 2487 | 47.57 | MASPSPSISPPENPSDSSVSSPPSPSSPVESATSPSSPTSSEPNQTGEPPSSLSSSSAPPPQSPPAVPDAPPPSPPLSPPPLTASPPATPASPPPSPPAGSPPSPPQSSPSPPSPPPPSTPSSPPPPPPSTSTSPPPPSTTSPPPSSASPPPPERSTTSPPPQTSPPPPDLSPPPPPAAADGSPPPASNPRPPSSTPSPPPPDTISPSPPPPTNVPTPPSSTGESPKVSPPSHKASPPPSDSQTPPSDNSPPPRSTVPSPPSSVPSSSAPPPVSDPGSPTNSSGGTPVTPPTSVTPERPIATINGTNVTANNSTTSKGGFSTGASVAVGSVVGVLVLSLVIMALWFVQKRKRRKKNIPYTIASPFSSQNSAPVVGSRTDSDFKYSSSEGGGVGNSRSFAYDDLHQATSGFSSNNLLGEGGFGCVYKGTLADGRDVAVKQLKVGGGQGEREFRAEVEIISRVHHRHLVSLVGYCISDYQRLLVYDYVPNNTLHYHLHGENRPVLAWATRVRIAAGAARGIAYLHEDCKFLPLDILQTWRFPTNAVGLGSNPLKFVEACIKSGHPRIIHRDIKSSNILLDINFEAQVADFGLAKLALDSHTHVTTRVMGTFGYMAPEYATSGKLTDKSDVFSFGVVLLELITGRKPVDSSQPLGDESLVEWILSFYINPNTLRSWLRLFLTEQMGLLARPLLAQAIEDENFEELVDPRLDNNYVDREMFRMIEAAAACVRHSAVKRPRMSQVVRALDSLDEMSDLANGVKPGQSGVFDSAEQSAQIRMFQRMAFGSQDYSYGYSERDRSRSYSQSHSSWSRESRDQSPSAPMNRSRQWNI | 828 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 5689932 | 5696690 | + | ClCG11G005260.1 | Cla11g00502 | 284324 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla11g00502 | 828 | MobiDBLite | consensus disorder prediction | 1 | 313 | - | - | |
Cla11g00502 | 828 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 136 | 527 | - | - | |
Cla11g00502 | 828 | MobiDBLite | consensus disorder prediction | 54 | 277 | - | - | |
Cla11g00502 | 828 | MobiDBLite | consensus disorder prediction | 790 | 828 | - | - | |
Cla11g00502 | 828 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 | 136 | 527 | - | - | |
Cla11g00502 | 828 | CDD | STKc_IRAK | 416 | 747 | - | - | |
Cla11g00502 | 828 | SMART | serkin_6 | 410 | 690 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla11g00502 | 828 | ProSitePatterns | Protein kinases ATP-binding region signature. | 416 | 438 | IPR017441 | GO:0005524 | |
Cla11g00502 | 828 | MobiDBLite | consensus disorder prediction | 278 | 313 | - | - | |
Cla11g00502 | 828 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 565 | 577 | IPR008271 | GO:0004672|GO:0006468 | |
Cla11g00502 | 828 | MobiDBLite | consensus disorder prediction | 12 | 53 | - | - | |
Cla11g00502 | 828 | Pfam | Protein tyrosine and serine/threonine kinase | 413 | 524 | IPR001245 | GO:0004672|GO:0006468 | |
Cla11g00502 | 828 | Gene3D | Transferase(Phosphotransferase) domain 1 | 486 | 759 | - | - | |
Cla11g00502 | 828 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 562 | 798 | - | - | |
Cla11g00502 | 828 | Pfam | Protein kinase domain | 564 | 648 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla11g00502 | 828 | MobiDBLite | consensus disorder prediction | 801 | 828 | - | - | |
Cla11g00502 | 828 | SUPERFAMILY | Protein kinase-like (PK-like) | 393 | 744 | IPR011009 | - | |
Cla11g00502 | 828 | Gene3D | Phosphorylase Kinase; domain 1 | 381 | 485 | - | - | |
Cla11g00502 | 828 | ProSiteProfiles | Protein kinase domain profile. | 410 | 732 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla11g00502 | 828 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 | 562 | 798 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla07g00865 | Cla-Chr7:24038856 | Cla11g00502 | Cla-Chr11:5689932 | 2.53E-126 | dispersed | |
Cla11g00221 | Cla-Chr11:2548037 | Cla11g00502 | Cla-Chr11:5689932 | 4.90E-143 | dispersed | |
Cla11g00502 | Cla-Chr11:5689932 | Cla03g01496 | Cla-Chr3:30528622 | 9.78E-87 | dispersed | |
Cla11g00502 | Cla-Chr11:5689932 | Cla05g02353 | Cla-Chr5:35102124 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80928 | PF00069 | Pkinase | 1.60E-21 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla11g00502 | - | - | csv:101211665 | 835.099 |