Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00506 ATGGCGGTTCCCCTGGTTCAGTTCCCGATCTTCATGGCTGTCAGAGTCCTCGGGATGCTTGTGGCAGCTCTTCTGTTCATTTGGACTTTGCACTTCCGTGGAGGATTAGCACTTATCTCAGAAAACAAGGATCACATCTTCAATGTCCATCCTGTTCTTATGGTGATTGGACTTATTCTTCTTAATGGTGAAGTGTACGAAGGAGATTGGAACTATTGCCCACTAGTTACTATAATATTGAGTGGGTACGAAACATTTCCTGGCACTCATCGTGTAGGTTTTAGTTATTCTCCTACCATGCTGGTGCTTTCAATGATTTTGTTCACCATTCTTAGATGTATTGATGCAGCAATGTTAGCATACAAGACAGTTTCAGGAACCAAGAACTTTAGAAAACTAGTTCATCTTGCACTCCAATTTGTTGCATTCTTTTTAAGCCTGATTGGCATATGGGCTGCCCTGAAGTTCCACAATGACAAAGGAATCGACAACTTTTACAGTCTACATTCATGGTTGGGCTTAGTTTCTATCTTTCTGTTTGGCATCCAGTGGTCTGCAGGTTTTGTAACCTTTTGGTACCCAGGTGGCTCTAGAAACAGCAGAGCTACTCTGTTGCCATGGCACGTTTTCTTTGGCATTTACATATATGGCCTTTCAATTGCTACAACTGTTACTGGATTGTTAGAAAAAGCTACATTCCTTCAAACCAGCAAGGTAATATTGCGCTATTCGAATGAGGCCTTGCTGATAAATTCATTGGGTGTCCTCATTGTTCTCTTGGGTGGTCTCGTGATTCTGGCGGTTATTGCTCCGTCGAACGCCAAAGGTGATGTTAACAGAGGACTAGCAGAGTAG 855 42.69 MAVPLVQFPIFMAVRVLGMLVAALLFIWTLHFRGGLALISENKDHIFNVHPVLMVIGLILLNGEVYEGDWNYCPLVTIILSGYETFPGTHRVGFSYSPTMLVLSMILFTILRCIDAAMLAYKTVSGTKNFRKLVHLALQFVAFFLSLIGIWAALKFHNDKGIDNFYSLHSWLGLVSIFLFGIQWSAGFVTFWYPGGSRNSRATLLPWHVFFGIYIYGLSIATTVTGLLEKATFLQTSKVILRYSNEALLINSLGVLIVLLGGLVILAVIAPSNAKGDVNRGLAE 284
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 5738605 5741199 + ClCG11G005300.2 Cla11g00506 284328
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00506 284 SMART 561_7 98 227 IPR006593 -
Cla11g00506 284 PANTHER CYTOCHROME B561-RELATED 1 65 IPR043205 GO:0016491
Cla11g00506 284 PANTHER CYTOCHROME B561-RELATED 91 281 IPR043205 GO:0016491
Cla11g00506 284 PANTHER B561, PUTATIVE-RELATED 91 281 - -
Cla11g00506 284 ProSiteProfiles Cytochrome b561 domain profile. 13 269 IPR006593 -
Cla11g00506 284 CDD Cyt_b561_ACYB-1_like 40 235 - -
Cla11g00506 284 Gene3D - 2 281 - -
Cla11g00506 284 PANTHER B561, PUTATIVE-RELATED 1 65 - -
Cla11g00506 284 Pfam Eukaryotic cytochrome b561 108 233 IPR006593 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00658 Cla-Chr1:7705590 Cla11g00506 Cla-Chr11:5738605 5.14E-45 transposed
Cla07g00653 Cla-Chr7:13644530 Cla11g00506 Cla-Chr11:5738605 1.02E-39 transposed
Cla09g01236 Cla-Chr9:16407007 Cla11g00506 Cla-Chr11:5738605 4.79E-57 transposed
Cla11g00506 Cla-Chr11:5738605 Cla05g02337 Cla-Chr5:34960582 3.66E-45 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00506 K08360 - csv:101212633 382.874