Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla11g00506 | ATGGCGGTTCCCCTGGTTCAGTTCCCGATCTTCATGGCTGTCAGAGTCCTCGGGATGCTTGTGGCAGCTCTTCTGTTCATTTGGACTTTGCACTTCCGTGGAGGATTAGCACTTATCTCAGAAAACAAGGATCACATCTTCAATGTCCATCCTGTTCTTATGGTGATTGGACTTATTCTTCTTAATGGTGAAGTGTACGAAGGAGATTGGAACTATTGCCCACTAGTTACTATAATATTGAGTGGGTACGAAACATTTCCTGGCACTCATCGTGTAGGTTTTAGTTATTCTCCTACCATGCTGGTGCTTTCAATGATTTTGTTCACCATTCTTAGATGTATTGATGCAGCAATGTTAGCATACAAGACAGTTTCAGGAACCAAGAACTTTAGAAAACTAGTTCATCTTGCACTCCAATTTGTTGCATTCTTTTTAAGCCTGATTGGCATATGGGCTGCCCTGAAGTTCCACAATGACAAAGGAATCGACAACTTTTACAGTCTACATTCATGGTTGGGCTTAGTTTCTATCTTTCTGTTTGGCATCCAGTGGTCTGCAGGTTTTGTAACCTTTTGGTACCCAGGTGGCTCTAGAAACAGCAGAGCTACTCTGTTGCCATGGCACGTTTTCTTTGGCATTTACATATATGGCCTTTCAATTGCTACAACTGTTACTGGATTGTTAGAAAAAGCTACATTCCTTCAAACCAGCAAGGTAATATTGCGCTATTCGAATGAGGCCTTGCTGATAAATTCATTGGGTGTCCTCATTGTTCTCTTGGGTGGTCTCGTGATTCTGGCGGTTATTGCTCCGTCGAACGCCAAAGGTGATGTTAACAGAGGACTAGCAGAGTAG | 855 | 42.69 | MAVPLVQFPIFMAVRVLGMLVAALLFIWTLHFRGGLALISENKDHIFNVHPVLMVIGLILLNGEVYEGDWNYCPLVTIILSGYETFPGTHRVGFSYSPTMLVLSMILFTILRCIDAAMLAYKTVSGTKNFRKLVHLALQFVAFFLSLIGIWAALKFHNDKGIDNFYSLHSWLGLVSIFLFGIQWSAGFVTFWYPGGSRNSRATLLPWHVFFGIYIYGLSIATTVTGLLEKATFLQTSKVILRYSNEALLINSLGVLIVLLGGLVILAVIAPSNAKGDVNRGLAE | 284 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 5738605 | 5741199 | + | ClCG11G005300.2 | Cla11g00506 | 284328 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla11g00506 | 284 | SMART | 561_7 | 98 | 227 | IPR006593 | - | |
| Cla11g00506 | 284 | PANTHER | CYTOCHROME B561-RELATED | 1 | 65 | IPR043205 | GO:0016491 | |
| Cla11g00506 | 284 | PANTHER | CYTOCHROME B561-RELATED | 91 | 281 | IPR043205 | GO:0016491 | |
| Cla11g00506 | 284 | PANTHER | B561, PUTATIVE-RELATED | 91 | 281 | - | - | |
| Cla11g00506 | 284 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 269 | IPR006593 | - | |
| Cla11g00506 | 284 | CDD | Cyt_b561_ACYB-1_like | 40 | 235 | - | - | |
| Cla11g00506 | 284 | Gene3D | - | 2 | 281 | - | - | |
| Cla11g00506 | 284 | PANTHER | B561, PUTATIVE-RELATED | 1 | 65 | - | - | |
| Cla11g00506 | 284 | Pfam | Eukaryotic cytochrome b561 | 108 | 233 | IPR006593 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla01g00658 | Cla-Chr1:7705590 | Cla11g00506 | Cla-Chr11:5738605 | 5.14E-45 | transposed | |
| Cla07g00653 | Cla-Chr7:13644530 | Cla11g00506 | Cla-Chr11:5738605 | 1.02E-39 | transposed | |
| Cla09g01236 | Cla-Chr9:16407007 | Cla11g00506 | Cla-Chr11:5738605 | 4.79E-57 | transposed | |
| Cla11g00506 | Cla-Chr11:5738605 | Cla05g02337 | Cla-Chr5:34960582 | 3.66E-45 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla11g00506 | K08360 | - | csv:101212633 | 382.874 |