Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00521 ATGCCCATCATGTTGCCACTCCTTACAACTTTAGCTTTCCTAACGACGTCGTTTTTCATCTTCTCTTTATTATACGACACCGTTTCTTGCTACTGGTTCACTCCTAGACGCATCAAGAAGAAGATGGCAAAGCAAGGTGTTCATGGCCCTAAACCCCGCCCTCTCCTCGGCAACATCCTCGACGTCGCCGCCCTCCTCTCCAAATCCACCTCCTCCGACATGCCCTCCATCTCCCACGACCTCGTCCCCCGTCTCCTACCTCATTTCCTCGCCTGGTCCACCCAATTCGAAACGGATTTGATAAAAGAGCTTTTGTCAAAATACAGTGCGGTTTCGGGAAAGTCATGGCTCCAACAACAAGGCTCTAAGCACTTTATTGGGAGAGGTCTTTTAATGGCCAACGGCCAAAATTGGTTCCATCAACGCCATATTGTCGCGCCGGCTTTCGTCGGGGATCGACTTAAGAGTTACGCGGGGTATATGGTGGAGTGCACAAAGGAGATGCTTGAATCAATAGAAAATGAGGTAAAATCGGGGCGATCAGAGTTTGAAATCGGCGAGTATATGACTAGACTCACTGCTGATATAATTTCAAGAACCGAGTTTGAAAGCAGCTACGAAAAGGGAAAACAAATCTTTCATTTACTTACTGTTTTACAGCATCTTTGTGCCCAGGCCAGCCGCCACCTCTGCCTTCCCGGTAGCCGGTTTTTTCCAAGTAAATATAACAGAGAGATAAAGGCATTGAAAGGGAAAGTGGAGGAGTTGTTAATGGAGATAATACAGAGTAGAAGGGATTGTGTGGAAATTGGAAGAAGCAGTTCATATGGAAATGATTTATTGGGAATGTTGCTAAATGAAATGCAAAAGAAAAAAGATGGGAATGGTTTGAGTTTGAATTTGCAAATTATAATGGATGAATGCAAAACCTTCTTCTTTGCTGGCCATGAAACCACTGCCCTTTTGCTCACTTGGACTGTCATGTTATTAGCCACTAACCCTTCTTGGCAACACAAGGTTCGAACCGAAGTTATGGCCATTTGCGGTTCTCAAACGCCTTCCTTTCATCATCTTTCCAAACTCTCCCTGTTGAGTATGGTGATAAATGAATCACTAAGACTATACCCACCAGCAAGTATTCTTCCAAGGATGGCATTTGAAGATATAAAACTTGGAGATTTAGAGATCCCAAAAGGCTTATCAATATGGATTCCAGTGTTAGCCATTCATCATAGTGAAGAATTATGGGGAAAAGATGCAAATGAGTTCAATCCAGAAAGATTTGCCAATTCAAAAGCTTTTACTTCTGGTGGATTCATCCCTTTTGCTTCTGGCCCTCGCAACTGTGTTGGCCAATCTTTTGCTCTTATGGAAACTAAGATCATCTTGGCTATGCTCATCTCCAAATTTAGCTTCACCATCTCGGATAATTATCGGCATGCGCCCGTCGTCGTGCTCACCATAAAACCTAAATATGGTGTTCAAGTCAAAGCCAGCAGCTTTCTTAATTGGCCTCAGATGCACCACTTTGGAGTTTGGAGGTTATTGAAGCCTCTTAGACAGTCTACCCAAAAAGGGTGTCTCTGA 1587 43.86 MPIMLPLLTTLAFLTTSFFIFSLLYDTVSCYWFTPRRIKKKMAKQGVHGPKPRPLLGNILDVAALLSKSTSSDMPSISHDLVPRLLPHFLAWSTQFETDLIKELLSKYSAVSGKSWLQQQGSKHFIGRGLLMANGQNWFHQRHIVAPAFVGDRLKSYAGYMVECTKEMLESIENEVKSGRSEFEIGEYMTRLTADIISRTEFESSYEKGKQIFHLLTVLQHLCAQASRHLCLPGSRFFPSKYNREIKALKGKVEELLMEIIQSRRDCVEIGRSSSYGNDLLGMLLNEMQKKKDGNGLSLNLQIIMDECKTFFFAGHETTALLLTWTVMLLATNPSWQHKVRTEVMAICGSQTPSFHHLSKLSLLSMVINESLRLYPPASILPRMAFEDIKLGDLEIPKGLSIWIPVLAIHHSEELWGKDANEFNPERFANSKAFTSGGFIPFASGPRNCVGQSFALMETKIILAMLISKFSFTISDNYRHAPVVVLTIKPKYGVQVKASSFLNWPQMHHFGVWRLLKPLRQSTQKGCL 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5953819 5958334 + ClCG11G005450.1 Cla11g00521 284343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00521 528 Coils Coil 246 266 - -
Cla11g00521 528 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00521 528 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00521 528 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00521 528 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00521 528 SUPERFAMILY Cytochrome P450 49 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00521 528 PANTHER CYTOCHROME P450 FAMILY MEMBER 15 498 - -
Cla11g00521 528 Coils Coil 162 182 - -
Cla11g00521 528 PANTHER CYTOCHROME P450 FAMILY PROTEIN 15 498 - -
Cla11g00521 528 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00521 528 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00521 528 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00521 528 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00521 528 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00521 528 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00521 528 Pfam Cytochrome P450 48 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00521 528 Gene3D Cytochrome P450 44 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla11g00521 Cla-Chr11:5953819 Cla11g00257 Cla-Chr11:2992425 3.12E-108 dispersed
Cla11g01282 Cla-Chr11:26340286 Cla11g00521 Cla-Chr11:5953819 2.12E-15 dispersed
Cla05g01247 Cla-Chr5:14366775 Cla11g00521 Cla-Chr11:5953819 0 transposed
Cla10g00773 Cla-Chr10:14294133 Cla11g00521 Cla-Chr11:5953819 3.12E-41 transposed
Cla11g00521 Cla-Chr11:5953819 Cla07g00503 Cla-Chr7:7214755 2.43E-101 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00521 K10717 - csv:101215037 914.064