Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla11g00534 | ATGCAGGTTGAAAAACTGATCAAGGAGCTTCCAAGTGCACCTGCTGATGGCTCAAACGGAACCATGAATTTAACAGATAAAAGTGCATTAAGTAATGGTGCTTCTTTACCACACATGGAGAACGGAACAAATCTTAGAGAAACACAGAGTATGCTCTTGGAAAGAATTTCCAGTGAAATGAATCGGCTGAAATTTTACATCGCTCATGCACAGGATCTTCCCTTCATTCAAAATATGGACAAGAGGATTCAGAGTGCCAGCCTGTTGCTGGACACGAGCTTGGGACATTGTTTTGTTGATGGACTTGCACATCATGATGAAAATGCTATTTACAATTGCCTACGTGCCTATGCTGCCATAGATAACACCACAAGTGCAGAAGAAATTTTTCGCAGTACTGTTGTATCACCAGCAATTCATAAAGTTTTTCCACATGGAGTTTCTGGCATGGAGGCTGGATCATCTGATGATGATTTGGAGAATGATTACAAGCAAATGAAGCAATATATTGATAAAGACTGCAAATTTTTGTTAGAAATATCTGCTACAGAAAACTCAGGACTACATGTATTTGATTTCTTGGCTAATTCAATCCTGAAAGAGGTTCTCTCTGCTATCCAAAAGGCAAAACCAGGTGCATTTTCCCCAGGAAGACCTACTGAATTCTTAAAGAACTACAAGTCGAGCCTTGATTTCTTGGCGTACTTGGAAGGCTATTGTCCATCCAGATCTGCTGTTGCTAAATTTCGAGCTGCATCTGTGTATAATGAGTTCATGAAGCAATGGAATATTGGGGTTTATTTTTCTCTGAGGCTTCAGGAAATAGCTGGGGCTTTGGATTCGTCCCTTTCAGCACCCATTCTAACCCCCATACAAACTTCACCTTCTGGCGGGGGAAATAATCAGGATCTAACATTAAAGCAGAGTGTGATGCTTTTAGACTGTCTGACAGCATGCTGGAGAGACGATGTTCTCGTCCTTTCTTGTTCTGACAAATACTCCAACTGGTTGTCATCTGGTCTAGCTGCCCGTAAGACGGGGACAGGCTCCCATCCAGGTTCTGAATGGGCTGTAGCAGCTGCCCCAGATGATTTGATATATATAATCCATGACCTTGGTTATCTAGCCACGGTGGTAGCTGGTAATTTTTTGGAAACTGTACTTCAGCTCCTATCGTCATGCCCTGCAGATGTTCTCAATTCAGTAAAGCAGAGCATTTTGCACAGTGGAAAGTCATTGAATAATTTAATGCCCAAAGTTACTGGTGCCATAGTTGCTTCACTGGTTGAGAAGTCTGTTGAGGACTTGAGACAGCTGAAGGGTATAACAGCAACATACAGGATGACCAATAAACCACTACCTGTAAGGCATTCACCCTATGTATCAGGGTTGCTACGCCCCTTAAAGGCCTTATTGGATGGAGAGAGGGCGTCAACTTTTTTGACAACGGAAACAAGGAATGCACTGCTGATCGATGCTGTGACAGAGATTACTGCTCGTTATTATGAGCAAGCAGCTGATCTTGTTAGCTTGGCTAGGAAAACAGATTCGTCACTCCAGAAAATCCGGCAGGGAGTACAAAGACGAGCTGGAGCAAGCTCAGATGTTTCAGACCATAACATCTCTGACACTGACAAGATTTGCATGCAACTCTTTCTTGATATTCAGGAGTATGGTCGCAACCTTTCAGCCCTTGGGGTTGAAGCAGCGATAACAAAGCATACATGCGGCGCACCGGATCTATGTCCTTCTCCCTCCTTTAAATATCAGAGCAGATCCAAAAACCCTAACAAATCTCAACCGCGCCTCTTGCAGCACACCGCCCGCTGCTACAAAATTCCATCTCGAGGGCCCAAATGCCACTCTCTGTTCCAAATAGCTGCCGATGAGTTCATGATTATTAGAGAGAAATCGGATCACTTTGAAATGGCGGTCGCTTTCCATGATGTCAAGTCTGCAGCCGGTTTGAAAAAACTCGATGAATACTTGCTTAGTCGTAGCTACATTTCCGGGTATCAGCCTTCAAAGGATGATGTTACCGTTTATGAAGCGATCTCCAAACCCGTTTCCAGTGAATATGTTAACGTGTCTAGGTGGAGTAATCACATTGAAGCACTCTTGAGAGTTTCCGCTGTTTTTGGAGAGGGTTCTGGTGTTAAGTTTGATGCAGTTGCAACCCCACCAGCTGCAGATGCAAAGGCTGCTGATGACGATGATGACGACGACATGGACCTATTTGGTGAAGAGACCGAAGAGGAAAAGAAGGCTGCTGAAGAGCGTGCAGCTGCCATTAAGGCTTCTGCAAAGAAGAAAGAGAGTGGCAAATCATCAGTTCTGATGGACATCAAACCTTGGGATGACGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGAAGCGTTCAGATGGAAGGCTTGCTCTGGGGAGCATCGAAACTCGTCCCTGTTGGATACGGTATTAAGAAATTGCAGATAATGCTCACAATTGTTGATGACCTTGTGTCTGTCGACAATCTCATTGAGGAACATCTGACAGTTGAACCCATAAACGAGCATGTCCAGAGCTGTGACATCGTGGCCTTCAACAAAATATGTAAGTCCCATTTTTATTTCGTTGCACTTGCACATAAGCTATTCGAAAATTACGGAGAACCAAAGACAGCTGGTTTCAAAGATGTTGCTGAGTTTGAGGAAGATGTTTAG | 2703 | 43.77 | MQVEKLIKELPSAPADGSNGTMNLTDKSALSNGASLPHMENGTNLRETQSMLLERISSEMNRLKFYIAHAQDLPFIQNMDKRIQSASLLLDTSLGHCFVDGLAHHDENAIYNCLRAYAAIDNTTSAEEIFRSTVVSPAIHKVFPHGVSGMEAGSSDDDLENDYKQMKQYIDKDCKFLLEISATENSGLHVFDFLANSILKEVLSAIQKAKPGAFSPGRPTEFLKNYKSSLDFLAYLEGYCPSRSAVAKFRAASVYNEFMKQWNIGVYFSLRLQEIAGALDSSLSAPILTPIQTSPSGGGNNQDLTLKQSVMLLDCLTACWRDDVLVLSCSDKYSNWLSSGLAARKTGTGSHPGSEWAVAAAPDDLIYIIHDLGYLATVVAGNFLETVLQLLSSCPADVLNSVKQSILHSGKSLNNLMPKVTGAIVASLVEKSVEDLRQLKGITATYRMTNKPLPVRHSPYVSGLLRPLKALLDGERASTFLTTETRNALLIDAVTEITARYYEQAADLVSLARKTDSSLQKIRQGVQRRAGASSDVSDHNISDTDKICMQLFLDIQEYGRNLSALGVEAAITKHTCGAPDLCPSPSFKYQSRSKNPNKSQPRLLQHTARCYKIPSRGPKCHSLFQIAADEFMIIREKSDHFEMAVAFHDVKSAAGLKKLDEYLLSRSYISGYQPSKDDVTVYEAISKPVSSEYVNVSRWSNHIEALLRVSAVFGEGSGVKFDAVATPPAADAKAADDDDDDDMDLFGEETEEEKKAAEERAAAIKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLTVEPINEHVQSCDIVAFNKICKSHFYFVALAHKLFENYGEPKTAGFKDVAEFEEDV | 900 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6083739 | 6093684 | + | ClCG11G005575.1 | Cla11g00534 | 284356 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla11g00534 | 900 | MobiDBLite | consensus disorder prediction | 729 | 756 | - | - | |
Cla11g00534 | 900 | CDD | EF1B | 773 | 864 | IPR014038 | GO:0003746|GO:0006414 | |
Cla11g00534 | 900 | Gene3D | - | 768 | 864 | IPR014717 | - | |
Cla11g00534 | 900 | Pfam | EF-1 guanine nucleotide exchange domain | 777 | 864 | IPR014038 | GO:0003746|GO:0006414 | |
Cla11g00534 | 900 | Pfam | COG complex component, COG2, C-terminal | 427 | 555 | IPR024603 | - | |
Cla11g00534 | 900 | PANTHER | CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 | 2 | 574 | IPR009316 | GO:0007030|GO:0015031|GO:0016020 | |
Cla11g00534 | 900 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 1. | 739 | 747 | IPR001326 | GO:0003746|GO:0005853|GO:0006414 | |
Cla11g00534 | 900 | SUPERFAMILY | GST C-terminal domain-like | 650 | 711 | IPR036282 | - | |
Cla11g00534 | 900 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 2. | 853 | 864 | IPR001326 | GO:0003746|GO:0005853|GO:0006414 | |
Cla11g00534 | 900 | Coils | Coil | 747 | 767 | - | - | |
Cla11g00534 | 900 | MobiDBLite | consensus disorder prediction | 16 | 43 | - | - | |
Cla11g00534 | 900 | Gene3D | - | 636 | 717 | - | - | |
Cla11g00534 | 900 | SMART | EF1_GNE_2 | 775 | 864 | IPR014038 | GO:0003746|GO:0006414 | |
Cla11g00534 | 900 | SUPERFAMILY | eEF-1beta-like | 772 | 864 | IPR036219 | - | |
Cla11g00534 | 900 | MobiDBLite | consensus disorder prediction | 8 | 43 | - | - | |
Cla11g00534 | 900 | MobiDBLite | consensus disorder prediction | 734 | 748 | - | - | |
Cla11g00534 | 900 | PANTHER | BNAA01G14200D PROTEIN | 2 | 574 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla11g00534 | K20289 | - | csv:101215350 | 1058.13 |