Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00534 ATGCAGGTTGAAAAACTGATCAAGGAGCTTCCAAGTGCACCTGCTGATGGCTCAAACGGAACCATGAATTTAACAGATAAAAGTGCATTAAGTAATGGTGCTTCTTTACCACACATGGAGAACGGAACAAATCTTAGAGAAACACAGAGTATGCTCTTGGAAAGAATTTCCAGTGAAATGAATCGGCTGAAATTTTACATCGCTCATGCACAGGATCTTCCCTTCATTCAAAATATGGACAAGAGGATTCAGAGTGCCAGCCTGTTGCTGGACACGAGCTTGGGACATTGTTTTGTTGATGGACTTGCACATCATGATGAAAATGCTATTTACAATTGCCTACGTGCCTATGCTGCCATAGATAACACCACAAGTGCAGAAGAAATTTTTCGCAGTACTGTTGTATCACCAGCAATTCATAAAGTTTTTCCACATGGAGTTTCTGGCATGGAGGCTGGATCATCTGATGATGATTTGGAGAATGATTACAAGCAAATGAAGCAATATATTGATAAAGACTGCAAATTTTTGTTAGAAATATCTGCTACAGAAAACTCAGGACTACATGTATTTGATTTCTTGGCTAATTCAATCCTGAAAGAGGTTCTCTCTGCTATCCAAAAGGCAAAACCAGGTGCATTTTCCCCAGGAAGACCTACTGAATTCTTAAAGAACTACAAGTCGAGCCTTGATTTCTTGGCGTACTTGGAAGGCTATTGTCCATCCAGATCTGCTGTTGCTAAATTTCGAGCTGCATCTGTGTATAATGAGTTCATGAAGCAATGGAATATTGGGGTTTATTTTTCTCTGAGGCTTCAGGAAATAGCTGGGGCTTTGGATTCGTCCCTTTCAGCACCCATTCTAACCCCCATACAAACTTCACCTTCTGGCGGGGGAAATAATCAGGATCTAACATTAAAGCAGAGTGTGATGCTTTTAGACTGTCTGACAGCATGCTGGAGAGACGATGTTCTCGTCCTTTCTTGTTCTGACAAATACTCCAACTGGTTGTCATCTGGTCTAGCTGCCCGTAAGACGGGGACAGGCTCCCATCCAGGTTCTGAATGGGCTGTAGCAGCTGCCCCAGATGATTTGATATATATAATCCATGACCTTGGTTATCTAGCCACGGTGGTAGCTGGTAATTTTTTGGAAACTGTACTTCAGCTCCTATCGTCATGCCCTGCAGATGTTCTCAATTCAGTAAAGCAGAGCATTTTGCACAGTGGAAAGTCATTGAATAATTTAATGCCCAAAGTTACTGGTGCCATAGTTGCTTCACTGGTTGAGAAGTCTGTTGAGGACTTGAGACAGCTGAAGGGTATAACAGCAACATACAGGATGACCAATAAACCACTACCTGTAAGGCATTCACCCTATGTATCAGGGTTGCTACGCCCCTTAAAGGCCTTATTGGATGGAGAGAGGGCGTCAACTTTTTTGACAACGGAAACAAGGAATGCACTGCTGATCGATGCTGTGACAGAGATTACTGCTCGTTATTATGAGCAAGCAGCTGATCTTGTTAGCTTGGCTAGGAAAACAGATTCGTCACTCCAGAAAATCCGGCAGGGAGTACAAAGACGAGCTGGAGCAAGCTCAGATGTTTCAGACCATAACATCTCTGACACTGACAAGATTTGCATGCAACTCTTTCTTGATATTCAGGAGTATGGTCGCAACCTTTCAGCCCTTGGGGTTGAAGCAGCGATAACAAAGCATACATGCGGCGCACCGGATCTATGTCCTTCTCCCTCCTTTAAATATCAGAGCAGATCCAAAAACCCTAACAAATCTCAACCGCGCCTCTTGCAGCACACCGCCCGCTGCTACAAAATTCCATCTCGAGGGCCCAAATGCCACTCTCTGTTCCAAATAGCTGCCGATGAGTTCATGATTATTAGAGAGAAATCGGATCACTTTGAAATGGCGGTCGCTTTCCATGATGTCAAGTCTGCAGCCGGTTTGAAAAAACTCGATGAATACTTGCTTAGTCGTAGCTACATTTCCGGGTATCAGCCTTCAAAGGATGATGTTACCGTTTATGAAGCGATCTCCAAACCCGTTTCCAGTGAATATGTTAACGTGTCTAGGTGGAGTAATCACATTGAAGCACTCTTGAGAGTTTCCGCTGTTTTTGGAGAGGGTTCTGGTGTTAAGTTTGATGCAGTTGCAACCCCACCAGCTGCAGATGCAAAGGCTGCTGATGACGATGATGACGACGACATGGACCTATTTGGTGAAGAGACCGAAGAGGAAAAGAAGGCTGCTGAAGAGCGTGCAGCTGCCATTAAGGCTTCTGCAAAGAAGAAAGAGAGTGGCAAATCATCAGTTCTGATGGACATCAAACCTTGGGATGACGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGAAGCGTTCAGATGGAAGGCTTGCTCTGGGGAGCATCGAAACTCGTCCCTGTTGGATACGGTATTAAGAAATTGCAGATAATGCTCACAATTGTTGATGACCTTGTGTCTGTCGACAATCTCATTGAGGAACATCTGACAGTTGAACCCATAAACGAGCATGTCCAGAGCTGTGACATCGTGGCCTTCAACAAAATATGTAAGTCCCATTTTTATTTCGTTGCACTTGCACATAAGCTATTCGAAAATTACGGAGAACCAAAGACAGCTGGTTTCAAAGATGTTGCTGAGTTTGAGGAAGATGTTTAG 2703 43.77 MQVEKLIKELPSAPADGSNGTMNLTDKSALSNGASLPHMENGTNLRETQSMLLERISSEMNRLKFYIAHAQDLPFIQNMDKRIQSASLLLDTSLGHCFVDGLAHHDENAIYNCLRAYAAIDNTTSAEEIFRSTVVSPAIHKVFPHGVSGMEAGSSDDDLENDYKQMKQYIDKDCKFLLEISATENSGLHVFDFLANSILKEVLSAIQKAKPGAFSPGRPTEFLKNYKSSLDFLAYLEGYCPSRSAVAKFRAASVYNEFMKQWNIGVYFSLRLQEIAGALDSSLSAPILTPIQTSPSGGGNNQDLTLKQSVMLLDCLTACWRDDVLVLSCSDKYSNWLSSGLAARKTGTGSHPGSEWAVAAAPDDLIYIIHDLGYLATVVAGNFLETVLQLLSSCPADVLNSVKQSILHSGKSLNNLMPKVTGAIVASLVEKSVEDLRQLKGITATYRMTNKPLPVRHSPYVSGLLRPLKALLDGERASTFLTTETRNALLIDAVTEITARYYEQAADLVSLARKTDSSLQKIRQGVQRRAGASSDVSDHNISDTDKICMQLFLDIQEYGRNLSALGVEAAITKHTCGAPDLCPSPSFKYQSRSKNPNKSQPRLLQHTARCYKIPSRGPKCHSLFQIAADEFMIIREKSDHFEMAVAFHDVKSAAGLKKLDEYLLSRSYISGYQPSKDDVTVYEAISKPVSSEYVNVSRWSNHIEALLRVSAVFGEGSGVKFDAVATPPAADAKAADDDDDDDMDLFGEETEEEKKAAEERAAAIKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVSVDNLIEEHLTVEPINEHVQSCDIVAFNKICKSHFYFVALAHKLFENYGEPKTAGFKDVAEFEEDV 900
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6083739 6093684 + ClCG11G005575.1 Cla11g00534 284356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00534 900 MobiDBLite consensus disorder prediction 729 756 - -
Cla11g00534 900 CDD EF1B 773 864 IPR014038 GO:0003746|GO:0006414
Cla11g00534 900 Gene3D - 768 864 IPR014717 -
Cla11g00534 900 Pfam EF-1 guanine nucleotide exchange domain 777 864 IPR014038 GO:0003746|GO:0006414
Cla11g00534 900 Pfam COG complex component, COG2, C-terminal 427 555 IPR024603 -
Cla11g00534 900 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 2 574 IPR009316 GO:0007030|GO:0015031|GO:0016020
Cla11g00534 900 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 739 747 IPR001326 GO:0003746|GO:0005853|GO:0006414
Cla11g00534 900 SUPERFAMILY GST C-terminal domain-like 650 711 IPR036282 -
Cla11g00534 900 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 853 864 IPR001326 GO:0003746|GO:0005853|GO:0006414
Cla11g00534 900 Coils Coil 747 767 - -
Cla11g00534 900 MobiDBLite consensus disorder prediction 16 43 - -
Cla11g00534 900 Gene3D - 636 717 - -
Cla11g00534 900 SMART EF1_GNE_2 775 864 IPR014038 GO:0003746|GO:0006414
Cla11g00534 900 SUPERFAMILY eEF-1beta-like 772 864 IPR036219 -
Cla11g00534 900 MobiDBLite consensus disorder prediction 8 43 - -
Cla11g00534 900 MobiDBLite consensus disorder prediction 734 748 - -
Cla11g00534 900 PANTHER BNAA01G14200D PROTEIN 2 574 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00534 K20289 - csv:101215350 1058.13