Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00557 ATGGAATCTCAGAAACGAAATCTCAGAGCTCGAAAACCCCTCGCGGATTGTACAAATACCATCCTCTCCTCCCAATCCTCGGCTTCCAATTTCTCCGCTTCTATCAAACCCCGTAAGCGTTTACTTGAGTCTGCGGTTAAAGATGTTATCAACAATGAGAAGAAAAGCAAACCAAGTTTTGTATCTGAATCTACATCCGTTAATTTGCGAGCTTCAAACCCTAGTTCTGATATTCTTCCTACAGAACCTTTCTCTGATTTTCCTCCTGCAGAACCAAACCCTAGTTCTGCTTCTCTTCCTTCAGAACCTAGTTCTACTCCACTCCCTACGGAAGTCTCCACTCCTTTGCGGCGTGCTGATTTGCCCTCTACTTCAGGAGCAGATCGTGTCTCGGAGCCCCAGTCATTCTACAGTCGAAGGCCTACGAATAAAAGGAAGAGCGTTGAGATAGCAGTTGCGCCATTTATTTTCTCTACCGCATCGAAAATCCAAACTGGATTTGTTGAGCCTCAGTTATTTGACTGTTTTGGATATGAAAAGCTTTGGGGTAGAAAAAGAGATGGATACGATAGCCCATCCAGAGCGAGGACTGTTCCTTGTAAAAAGAGGCAGCGTGCGACAGTGAATGAGGAAGATGAGTCCAACATAGAGCTTCCACGGGAATTTGTTGAACAGCAGAAAGCTTATTTTTCAGAATTAAAGAGCTTGTGGGTTGTTGTAGCAATGGCTGATTCAAGATTCAGAGGAGTTTTGGTTTTGACTTTGGCTTTGTTTATGCTCTTTTTGGGGAATGTCTCAGCTCAACTTTCTACTGGCTTTTACTCTTCTTCTTGTCCAAATTTGTTGTCCACCGTCAAATCCTCTGTTCGATCTGCTGTCTCCAGTGAAGCTCGAATGGGCGCTTCCATTCTTCGCTTGTTTTTTCATGACTGTTTCGTCAATGGATGCGACGGGTCCATTTTGTTAGATGACACGTCAAGCTTTACTGGAGAGAAAAATGCAAACCCCAATAGAAACTCAGCTAGAGGCTTTGATGTCATTGATAACATCAAAACCGCTGTCGAAAAAGCTTGTCCTGGTATTGTTTCTTGTGCTGATATTCTCGCTATTGCTGCTCGTGACTCTGTCGTTCTCCTAGGAGGGCCAAGCTGGAATGTGAAGTTGGGAAGAAGAGACGCCACAACTGCAAGCCAATCCCAAGCCAACAGCGATATCCCCGGGCCAACTTCAACTTTAAACCAACTCAGCTCTAGATTCAGCGCTCTCGGACTCTCCAACACCGACTTGGTTGCCCTTTCAGGCGGGCACACGATCGGGCAAGCACGGTGCACGACATTTAGAGGGAGAATATACAGCAATGGCACAAACATTGAGAGTTCATTTGCAAGAACAAGGCAAAGCAATTGCCCCAATACCTCAGGAACTGGAGACAACAATTTGGCTCCTTTGGATTTGCAAACTCCAAACTCATTTGACAACAACTACTTCAAGAATCTTCTTCAAAACAAGGGCCTTCTACAATCGGATCAAGTTCTCTTCAATGGCGGATCTACAGATTCCAGTGTTCAAAATTACGCAAATGCCCCTGCTCGTTTCTTCTCTGATTTTGCTGCTGCCATGGTGAAGATGGGAGATATCAGTCCTCTTACTGGCTCCAACGGTGAAATTAGGAAGGACTGCAGGAGGGTTAACTAA 1695 45.01 MESQKRNLRARKPLADCTNTILSSQSSASNFSASIKPRKRLLESAVKDVINNEKKSKPSFVSESTSVNLRASNPSSDILPTEPFSDFPPAEPNPSSASLPSEPSSTPLPTEVSTPLRRADLPSTSGADRVSEPQSFYSRRPTNKRKSVEIAVAPFIFSTASKIQTGFVEPQLFDCFGYEKLWGRKRDGYDSPSRARTVPCKKRQRATVNEEDESNIELPREFVEQQKAYFSELKSLWVVVAMADSRFRGVLVLTLALFMLFLGNVSAQLSTGFYSSSCPNLLSTVKSSVRSAVSSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEKNANPNRNSARGFDVIDNIKTAVEKACPGIVSCADILAIAARDSVVLLGGPSWNVKLGRRDATTASQSQANSDIPGPTSTLNQLSSRFSALGLSNTDLVALSGGHTIGQARCTTFRGRIYSNGTNIESSFARTRQSNCPNTSGTGDNNLAPLDLQTPNSFDNNYFKNLLQNKGLLQSDQVLFNGGSTDSSVQNYANAPARFFSDFAAAMVKMGDISPLTGSNGEIRKDCRRVN 564
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6305572 6315157 - ClCG11G005810.2 Cla11g00557 284379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00557 564 ProSitePatterns Peroxidases proximal heme-ligand signature. 428 438 IPR019793 -
Cla11g00557 564 SUPERFAMILY Heme-dependent peroxidases 268 564 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla11g00557 564 MobiDBLite consensus disorder prediction 55 80 - -
Cla11g00557 564 Gene3D Peroxidase, domain 2 406 543 - -
Cla11g00557 564 ProSitePatterns Peroxidases active site signature. 300 311 IPR019794 GO:0004601
Cla11g00557 564 MobiDBLite consensus disorder prediction 1 38 - -
Cla11g00557 564 PRINTS Plant peroxidase signature 278 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00557 564 PRINTS Plant peroxidase signature 302 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00557 564 PRINTS Plant peroxidase signature 342 355 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00557 564 PRINTS Plant peroxidase signature 361 371 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00557 564 PRINTS Plant peroxidase signature 380 395 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00557 564 PRINTS Plant peroxidase signature 427 439 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00557 564 PRINTS Plant peroxidase signature 482 497 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00557 564 PRINTS Plant peroxidase signature 498 515 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00557 564 PRINTS Plant peroxidase signature 538 551 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00557 564 MobiDBLite consensus disorder prediction 17 34 - -
Cla11g00557 564 Gene3D - 273 564 - -
Cla11g00557 564 MobiDBLite consensus disorder prediction 127 141 - -
Cla11g00557 564 PRINTS Haem peroxidase superfamily signature 300 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00557 564 PRINTS Haem peroxidase superfamily signature 362 379 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00557 564 PRINTS Haem peroxidase superfamily signature 380 392 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00557 564 PRINTS Haem peroxidase superfamily signature 428 443 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00557 564 PRINTS Haem peroxidase superfamily signature 484 499 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00557 564 MobiDBLite consensus disorder prediction 97 120 - -
Cla11g00557 564 ProSiteProfiles Plant heme peroxidase family profile. 268 564 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00557 564 MobiDBLite consensus disorder prediction 50 143 - -
Cla11g00557 564 CDD secretory_peroxidase 268 563 IPR033905 GO:0004601|GO:0042744
Cla11g00557 564 PANTHER PEROXIDASE 249 564 - -
Cla11g00557 564 Pfam Peroxidase 285 527 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00557 564 PANTHER PEROXIDASE 72-RELATED 249 564 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01870 Cla-Chr2:33869612 Cla11g00557 Cla-Chr11:6305572 4.90E-137 dispersed
Cla02g02299 Cla-Chr2:38088261 Cla11g00557 Cla-Chr11:6305572 2.05E-97 dispersed
Cla02g02305 Cla-Chr2:38174994 Cla11g00557 Cla-Chr11:6305572 2.72E-97 dispersed
Cla03g00023 Cla-Chr3:273791 Cla11g00557 Cla-Chr11:6305572 2.21E-122 dispersed
Cla05g02360 Cla-Chr5:35184436 Cla11g00557 Cla-Chr11:6305572 1.18E-96 dispersed
Cla07g00253 Cla-Chr7:2784651 Cla11g00557 Cla-Chr11:6305572 1.16E-119 dispersed
Cla07g00832 Cla-Chr7:23049341 Cla11g00557 Cla-Chr11:6305572 3.39E-110 dispersed
Cla11g00085 Cla-Chr11:1110701 Cla11g00557 Cla-Chr11:6305572 1.41E-133 dispersed
Cla11g00086 Cla-Chr11:1117328 Cla11g00557 Cla-Chr11:6305572 2.25E-137 dispersed
Cla11g00557 Cla-Chr11:6305572 Cla01g01943 Cla-Chr1:34110056 1.20E-109 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00557 K00430 - csv:101218447 568.155