Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00615 ATGGCGAAGTTCAGGGATAGGACTGAAGATTTTAAAGATGTTGTGCGGCACTGTGCTATTTCGTTAGGGTACAATGAGTCCAAGTTGGCGGTTATTATGGCATCTTTCATCATTCAGAAACCGCGGCAAAGGTCACCTTTCATCAAAGCTGCCCTGAAAACGCTTGAAAGCATTGGTGCTCTTGAAGAGTTTATGTTGAAACATCAAAAGGACTATGTAGATATGTATCGCACGACAGATCAAGAGAGAGACAATATTGAACACGAGGTAACTGCCTTCATCAAAGCATGCCAAGAACAACTTGATATCCTAAAAAACAGCATTAACGCGGATGATGCACACTCAAAGGGATGGCGTGGTCGTAGCACTGATGATTCTAATGCTGATACTATTGCACACAAACATGGGGTGGTTCTAATTTTGAGTGAGAAACTCCATTCGGTAACATCACAATTTGATAAGCTAAGAGCCATTCGGTTTCAAGATATCATAAGCAAAGCAGTACCAAGAAGAAAACTGAACCAAGTAAATAAACCACGTTCTGCCAATGCCCCTGAGTATAGTAATACAGAGCTGAGGGAACCTGATGATAATTTTGAGCATCAACCTGTCCGAGCCCAACAACTGTTGGATGATGAAACTCGTGCACTTCAGGTTGAGTTGACTAGTCTTCTTGACACAGTCCAAGAAACAGAAACTAAGATGGTAGAGATGTCTGCTCTAAATCACCTTATGTCTACACACGTTTTGCAGCAAGCACAACAAATTGAACATCTTTATGAACAGGCTGTTGAAGCTACGAAGAATGTCGAGCTTGTTGATGGGACTGATTGTTGTATCACATTTATGTTATACATTCATATAGAAGCAAGAAAAAGAAGAAATCACCGATGGAATTTAGACCACATTTTTGTTACTGCAAGTATTTTCTTTCATATCCAGACTCAAATAGTTACAATGAGTGAACCATCTGCCACTTCAATTTCTCGAAGTTCCCTGCATTTTAGTTGCTGGAGCATGAGGTTTTCCTGA 1032 40.41 MAKFRDRTEDFKDVVRHCAISLGYNESKLAVIMASFIIQKPRQRSPFIKAALKTLESIGALEEFMLKHQKDYVDMYRTTDQERDNIEHEVTAFIKACQEQLDILKNSINADDAHSKGWRGRSTDDSNADTIAHKHGVVLILSEKLHSVTSQFDKLRAIRFQDIISKAVPRRKLNQVNKPRSANAPEYSNTELREPDDNFEHQPVRAQQLLDDETRALQVELTSLLDTVQETETKMVEMSALNHLMSTHVLQQAQQIEHLYEQAVEATKNVELVDGTDCCITFMLYIHIEARKRRNHRWNLDHIFVTASIFFHIQTQIVTMSEPSATSISRSSLHFSCWSMRFS 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7029767 7033094 - ClCG11G006420.2 Cla11g00615 284437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00615 343 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
Cla11g00615 343 SUPERFAMILY t-snare proteins 61 271 IPR010989 GO:0016020|GO:0016192
Cla11g00615 343 Gene3D - 48 271 - -
Cla11g00615 343 PANTHER SYNTAXIN-18 5 271 - -
Cla11g00615 343 MobiDBLite consensus disorder prediction 174 198 - -
Cla11g00615 343 PANTHER SYNTAXIN-18 5 271 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00615 K08492 - csv:101207161 511.146