Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00635 ATGGCATCCATTTCGAAACGGCTACTCCTCTTCGCGGCGGCGCTACTCGCCACCGCTGAAATCGCAACCTCCATCACCCGATGCCCGGACTGCGGCGGCGCTTCCGTCCCCTATCCTCTGAGTACAAGCCCCACATGTGGGGACCAATCGTATAAGATCCGGTGCGACGCAGGCTCACTGAAATTCGACACGCTGAACAACACGTACCCGATCATCTCGATCAACCCGTCGATCCAACGGCTGGTGATTCAGCCCTCAAATTTCCTCCCGAACACGTGTGTGACAGCGGATATCGCTCACGACGGAATCAAATTGAACAGTAGTTTACCCTTCAACGTGACGAGCGGGAACACGATCCTGTACTTCAACTGTACGGATTCGCTTCTGCGCTCGCCGTTGAACTGCTCGTCGACGAGTCTGTGCCATTCGTACATCAACGGGTCAAGAGGAGCGGCGGCGTGCGAGGCGGCGCCGCTGTGCTGCACGTTTCGGGCGGGTGGGTCGTCGAATTCGTACATGATTCGGGTGAGGGAATCGGGGTGTAGCGCGTACACGAGCTTTGTGAACTTGAACCCGAGTTTGGGAGTGGTTCCGTGGCCCGAACCCGGGTTGGAGCTGCAGTGGCTTTTGCCGAGGGAGCCGGTTTGTAATACGCAGGCTGATTGTGATGTGAACGCGGTTTGTGGTGTTGACCCGAGTGGGACGGCGTTGAGACGTTGTCTTTGTAATTCTGGGTTTGTGTGGGACCCTGTTGCTGGAATCTGCTCTCAAAATACGTGTCATGATCCTGATGGTTGTAGTACGCACCGAACTGCACTGATAGCTGGCATTGTATCCGGCGTGGGCGCGGCGTTGATCATCTCAACAATAGCAATGCTAGTGTACAATCGGCATAGAAGAGCGAAAGAAGCTCAAGATCGTTTAACAAAGGAGCGTGAAGCCATTCTGAATTCCAACGGCGGAGGCGGAAGGGCGGCAAAGATCTTCACTGGTAAAGAGATCAAGAGGGCCACCCACAACTTCTCCGTCGACCACCTTCTGGGTGTCGGCGGCTACGGTGAGGTCTACAAAGGCGTTCTCGGGGACGGAACCACCGTGGCCGTAAAGTGCGCCAAGCTCGGAAACGCAAAAGGGACCGACCAAGTCCTGAATGAGGTCCGAATCCTGTGCCAAGTTAACCACCGGAGTCTTGTCCGGCTCCTTGGCTGCTGCGTCGAACTAGAACAGCCAATTTTGGTGTACGAGTATATTCCCAACGGCACTCTTCTCGACCATTTACAAGGTATTAAAGACACAAGGTCACTATCATGGGAGGAACGACTCCGAATTGCGCAGGGCACAGCAGAGGGACTAGCATATCTTCATTTCTCAGCAGTTCCACCCATCTACCACCGAGACGTCAAATCTAGCAACATCCTCTTAGACCACAAGCTAATCCCCAAAGTTTCAGATTTCGGGCTCTCCCGATTGGCAGAAACAGATCTAAGCCATATCTCAACTTGCGCCCAAGGAACTCTAGGCTACCTGGACCCCGAGTACTATCGAAACTATCAATTGACGGACAAGAGCGACGTGTACAGCTTTGGAGTGGTTCTGCTTGAGCTATTGACATCACAAAAGGCCATCGACTTCGGTCGTGAGGCTGACGACGTCAACTTGGCAGTTTATGTGCAACGGCTGGTGGAGGAAGAGAGATTGGTGGATGCCATTGATCCGTGGCTGAAGAAGGGAGCTACAGATGTGGAGGTTGATACGATGAAGGCTTTGGGGTTCCTTGCAGTGGGGTGCTTGGAACAGAGAAGGCAGAACCGACCTTCTATGAAAGAAGTGGTGGAGGAGATTCAATACATCATTAGCATCGCCATTGCTAAGGCTTAA 1878 53.41 MASISKRLLLFAAALLATAEIATSITRCPDCGGASVPYPLSTSPTCGDQSYKIRCDAGSLKFDTLNNTYPIISINPSIQRLVIQPSNFLPNTCVTADIAHDGIKLNSSLPFNVTSGNTILYFNCTDSLLRSPLNCSSTSLCHSYINGSRGAAACEAAPLCCTFRAGGSSNSYMIRVRESGCSAYTSFVNLNPSLGVVPWPEPGLELQWLLPREPVCNTQADCDVNAVCGVDPSGTALRRCLCNSGFVWDPVAGICSQNTCHDPDGCSTHRTALIAGIVSGVGAALIISTIAMLVYNRHRRAKEAQDRLTKEREAILNSNGGGGRAAKIFTGKEIKRATHNFSVDHLLGVGGYGEVYKGVLGDGTTVAVKCAKLGNAKGTDQVLNEVRILCQVNHRSLVRLLGCCVELEQPILVYEYIPNGTLLDHLQGIKDTRSLSWEERLRIAQGTAEGLAYLHFSAVPPIYHRDVKSSNILLDHKLIPKVSDFGLSRLAETDLSHISTCAQGTLGYLDPEYYRNYQLTDKSDVYSFGVVLLELLTSQKAIDFGREADDVNLAVYVQRLVEEERLVDAIDPWLKKGATDVEVDTMKALGFLAVGCLEQRRQNRPSMKEVVEEIQYIISIAIAKA 625
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7301962 7305011 - ClCG11G006640.1 Cla11g00635 284457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00635 625 ProSiteProfiles Protein kinase domain profile. 341 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00635 625 Gene3D Phosphorylase Kinase; domain 1 317 416 - -
Cla11g00635 625 Pfam Protein kinase domain 342 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00635 625 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 622 IPR045274 GO:0007166
Cla11g00635 625 PANTHER OS05G0318100 PROTEIN 17 622 - -
Cla11g00635 625 SUPERFAMILY Protein kinase-like (PK-like) 327 613 IPR011009 -
Cla11g00635 625 CDD STKc_IRAK 347 615 - -
Cla11g00635 625 Gene3D Transferase(Phosphotransferase) domain 1 417 622 - -
Cla11g00635 625 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Cla11g00635 625 SMART serkin_6 341 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00635 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g01606 Cla-Chr1:30783716 Cla11g00635 Cla-Chr11:7301962 2.12E-93 dispersed
Cla08g01525 Cla-Chr8:28009031 Cla11g00635 Cla-Chr11:7301962 3.69E-94 dispersed
Cla11g00635 Cla-Chr11:7301962 Cla11g01863 Cla-Chr11:32150679 5.62E-82 dispersed
Cla11g00744 Cla-Chr11:10625130 Cla11g00635 Cla-Chr11:7301962 4.28E-79 dispersed
Cla02g01499 Cla-Chr2:29506697 Cla11g00635 Cla-Chr11:7301962 8.46E-46 transposed
Cla10g01861 Cla-Chr10:34516333 Cla11g00635 Cla-Chr11:7301962 0 transposed
Cla11g00720 Cla-Chr11:10015383 Cla11g00635 Cla-Chr11:7301962 2.71E-91 transposed
Cla11g00635 Cla-Chr11:7301962 Cla04g00781 Cla-Chr4:22870003 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80934 PF00069 Pkinase 4.20E-44 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00635 - - csv:101220186 1136.71