Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla11g00683 | ATGACTCAATTGCCGTTCAAAGTTCAAACCAAAATTGAAAATAATCTTCCGTCTGCAACGGTCCATTGCCCTGCCATGGAACTTGAATCACAATCAGAGTTCCCGTACTGGAAGCCTTTCCAACGGAGGTTCGATCCTGATTCTCCCTTCTTTGCCTCTGGAAATGTCGAGCGTGAAATCTTAGCCAAACAGGTTGCCTTGGATTTAACCGAAGATGAAAAGGTACAGCTGCATAACATGGCAGTTGATGCTAGCAGTGAAATCTTTTGCCCAATTGTTGGTTGCGGTGCACACTTGAAATCTCTGGATGACTTTGAAGATCATTACAATTCGCGGCATACTGCCTCTTGTTCTGTTTGCCCAAGAGTTTACCCGACATCACGGCTACTTAGTTTACATGTGTCTGAGGCGCATGACTCGTTCTTTCAAGCAAAAGTTGCTCGTGGCTATGACATGTATGAATGCCTGGTGGAAGGTTGTGGTTTGAAGTTCAAAAGCTACAAAAGCAGACAGCAGCATCTAGTGGACAAGCATAAATTTTCTGCTTCATTTGAATTCTTTAAGAAAGCTCATCCATCTAAGAAACAAAGACAGAAATTACATCGTAAACAAGCCCTTCAAGGGTGGGAAGAAACCTCGGAAATGGAAGTTGAGAATGAAACTATAGATGGCCTCATTTCAGGAGTATCTAAACTAACTACTTCGGACTTAACTCCTTCGTCAATCAGCTTTGGGCGGAGGCACACTCGAGGGTTACAATTTCTTCCTCGAGCAGTTCAGCGAGAAAAAGTGTCAGACTCCTCAACAGCTGGAACAAAGAGATGA | 825 | 43.52 | MTQLPFKVQTKIENNLPSATVHCPAMELESQSEFPYWKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKVQLHNMAVDASSEIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDSFFQAKVARGYDMYECLVEGCGLKFKSYKSRQQHLVDKHKFSASFEFFKKAHPSKKQRQKLHRKQALQGWEETSEMEVENETIDGLISGVSKLTTSDLTPSSISFGRRHTRGLQFLPRAVQREKVSDSSTAGTKR | 274 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 7939937 | 7942122 | - | ClCG11G007130.1 | Cla11g00683 | 284505 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla11g00683 | 274 | SMART | c2h2final6 | 115 | 138 | IPR013087 | - | |
Cla11g00683 | 274 | SMART | c2h2final6 | 88 | 113 | IPR013087 | - | |
Cla11g00683 | 274 | SMART | c2h2final6 | 153 | 178 | IPR013087 | - | |
Cla11g00683 | 274 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 155 | 178 | IPR013087 | - | |
Cla11g00683 | 274 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 117 | 138 | IPR013087 | - | |
Cla11g00683 | 274 | PANTHER | ZINC FINGER PROTEIN 511 | 29 | 263 | - | - | |
Cla11g00683 | 274 | PANTHER | UNCHARACTERIZED | 29 | 263 | IPR039258 | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62025 | None | None | None | None | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla11g00683 | - | - | csv:101212859 | 459.144 |