Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00683 ATGACTCAATTGCCGTTCAAAGTTCAAACCAAAATTGAAAATAATCTTCCGTCTGCAACGGTCCATTGCCCTGCCATGGAACTTGAATCACAATCAGAGTTCCCGTACTGGAAGCCTTTCCAACGGAGGTTCGATCCTGATTCTCCCTTCTTTGCCTCTGGAAATGTCGAGCGTGAAATCTTAGCCAAACAGGTTGCCTTGGATTTAACCGAAGATGAAAAGGTACAGCTGCATAACATGGCAGTTGATGCTAGCAGTGAAATCTTTTGCCCAATTGTTGGTTGCGGTGCACACTTGAAATCTCTGGATGACTTTGAAGATCATTACAATTCGCGGCATACTGCCTCTTGTTCTGTTTGCCCAAGAGTTTACCCGACATCACGGCTACTTAGTTTACATGTGTCTGAGGCGCATGACTCGTTCTTTCAAGCAAAAGTTGCTCGTGGCTATGACATGTATGAATGCCTGGTGGAAGGTTGTGGTTTGAAGTTCAAAAGCTACAAAAGCAGACAGCAGCATCTAGTGGACAAGCATAAATTTTCTGCTTCATTTGAATTCTTTAAGAAAGCTCATCCATCTAAGAAACAAAGACAGAAATTACATCGTAAACAAGCCCTTCAAGGGTGGGAAGAAACCTCGGAAATGGAAGTTGAGAATGAAACTATAGATGGCCTCATTTCAGGAGTATCTAAACTAACTACTTCGGACTTAACTCCTTCGTCAATCAGCTTTGGGCGGAGGCACACTCGAGGGTTACAATTTCTTCCTCGAGCAGTTCAGCGAGAAAAAGTGTCAGACTCCTCAACAGCTGGAACAAAGAGATGA 825 43.52 MTQLPFKVQTKIENNLPSATVHCPAMELESQSEFPYWKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKVQLHNMAVDASSEIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDSFFQAKVARGYDMYECLVEGCGLKFKSYKSRQQHLVDKHKFSASFEFFKKAHPSKKQRQKLHRKQALQGWEETSEMEVENETIDGLISGVSKLTTSDLTPSSISFGRRHTRGLQFLPRAVQREKVSDSSTAGTKR 274
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7939937 7942122 - ClCG11G007130.1 Cla11g00683 284505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00683 274 SMART c2h2final6 115 138 IPR013087 -
Cla11g00683 274 SMART c2h2final6 88 113 IPR013087 -
Cla11g00683 274 SMART c2h2final6 153 178 IPR013087 -
Cla11g00683 274 ProSitePatterns Zinc finger C2H2 type domain signature. 155 178 IPR013087 -
Cla11g00683 274 ProSitePatterns Zinc finger C2H2 type domain signature. 117 138 IPR013087 -
Cla11g00683 274 PANTHER ZINC FINGER PROTEIN 511 29 263 - -
Cla11g00683 274 PANTHER UNCHARACTERIZED 29 263 IPR039258 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62025 None None None None Cla TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00683 - - csv:101212859 459.144