Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla11g00689 | ATGAACAATCATCAACAAATGAACTTGGTTTTGTCTACTGATGCAAAGCCAAGGCTGAAATGGACTTCTGAGCTTCATCAAAGATTTGTTGAGGCTGTCAATCATCTTGGTGGAGCAGATAAGGCCACCCCTAAGAGCTTGATGAGAGTTATGGGAATCACTGGCCTTAGTCTTTACCATCTCAAGAGCCACTTACAGAAATACAGGTTGGGAAAAAGCCAGCCGTCTGAAACCAATGCCCAACTCAAGCTAGAAGAGATGCAGAGAAAAGGTGGGAATTTTGATGGAGAAGAAAACAAGGATAGAAGTCAAAATCATAACAAAACAGAGAGCATGAAGATATCCGAAGCTCTAGAAATGCAAATGGAAGTACAGAAGAGATTACAAGAGCAAATAGAGGTACAAAGGCATTTACAACTGAGAATCGAAGCACAAGGAAAATATTTAAAGACAGTGTTAAGAAAGGCACAAGAGACAATTGCAGGGTACGGATGTTGTTCTGAAGCACTTGAAGAAGCCAAAGCAGAGCTCTCTCAATTGGCTTCAATGGTGAGTTCTGGTTGTCAGAGCTCTTCTTTATCAGAACTGACTGACTCGACAGAACTGAATTTCAAAGGCATTGAAAGAGTAGGAAGAAGAATGTGTTCCATTGAAAGCTCTTTAACGTCTTCAGAGACCTCAGAGGAGGCCCCAATCACGAAGAAGAGAAAAGGAAAAGAAAAGGAAAAGGAAAAAGAACAGAGCAGCTCTGTTTCGGAGGGAGATTGTAAGAGATTAACAATGCATAAAAGTGATGAGGAACACGAGGAATTCAGAATGATCGACTTGAATGATTCTCAATTTGACGATAATACAAGTGGAATTGAATCACAGTTGATTGAGTTCCTTTAA | 891 | 40.29 | MNNHQQMNLVLSTDAKPRLKWTSELHQRFVEAVNHLGGADKATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQPSETNAQLKLEEMQRKGGNFDGEENKDRSQNHNKTESMKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCCSEALEEAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRMCSIESSLTSSETSEEAPITKKRKGKEKEKEKEQSSSVSEGDCKRLTMHKSDEEHEEFRMIDLNDSQFDDNTSGIESQLIEFL | 296 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8061773 | 8063463 | + | ClCG11G007240.2 | Cla11g00689 | 284511 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla11g00689 | 296 | Pfam | MYB-CC type transfactor, LHEQLE motif | 112 | 159 | IPR025756 | - | |
Cla11g00689 | 296 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 16 | 71 | IPR006447 | GO:0003677 | |
Cla11g00689 | 296 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 4 | 287 | IPR044848 | GO:0003700 | |
Cla11g00689 | 296 | MobiDBLite | consensus disorder prediction | 229 | 267 | - | - | |
Cla11g00689 | 296 | MobiDBLite | consensus disorder prediction | 90 | 109 | - | - | |
Cla11g00689 | 296 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 13 | 73 | IPR017930 | - | |
Cla11g00689 | 296 | Pfam | Myb-like DNA-binding domain | 18 | 69 | IPR001005 | - | |
Cla11g00689 | 296 | Gene3D | - | 15 | 73 | - | - | |
Cla11g00689 | 296 | SUPERFAMILY | Homeodomain-like | 15 | 71 | IPR009057 | - | |
Cla11g00689 | 296 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL8 | 4 | 287 | - | - | |
Cla11g00689 | 296 | MobiDBLite | consensus disorder prediction | 218 | 267 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla09g02227 | Cla-Chr9:39854007 | Cla11g00689 | Cla-Chr11:8061773 | 1.51E-52 | dispersed | |
Cla10g01268 | Cla-Chr10:27482619 | Cla11g00689 | Cla-Chr11:8061773 | 2.84E-59 | dispersed | |
Cla10g01611 | Cla-Chr10:31544836 | Cla11g00689 | Cla-Chr11:8061773 | 5.38E-37 | dispersed | |
Cla11g00689 | Cla-Chr11:8061773 | Cla02g01833 | Cla-Chr2:33478656 | 4.58E-54 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62026 | PF00249 | Myb_DNA-binding | 1.10E-06 | CL0123 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla11g00689 | - | - | bhj:120079511 | 468.774 |