Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00720 ATGGGGCTATTGATAAGTTGCTCTTGGTTCTACATCGGCTTCAAGAGATGGAAGCTCATAAAACTCAGAGAATATTTCTTCCGACAAAATGGAGGATTAATGTTTGAGCAACAACTTTCCATCCGAGACGACGCCGCACAAACCGCTAAACTTTTCACAGCTGAGGAATTACGGAAAGCCACTAACAACTACTCTGACGACCGAATCGTCGGCAAAGGCGGCTTCGGAACAGTCTACAAAGGCATCCTCCCTACCGGCGCCGCCGTCGCCATCAAGAAATCCAAGATCGTCGATAAAACTCAGAACAAACAGTTCATCAACGAAGTCATTGTCCTCTCACAGATCAATCATCGAAACACAGTCAAGCTCTTAGGCTGTTGCTTGGAAGAAGAAGTTCCTCTTCTCGTCTACGAATTCGTCTCCAATGGCACGCTCTTCGATCACATTCACAAGAGAAAATCACAGCGCTCTATTCCTTGGAAGATCCGCCTCAAAATCGCGTCCGAAACCGCCGGAGTACTCTCCTATCTTCACTCCTCCGCCACTATTCCGATCATTCACAGAGATGTCAAATCCACAAACATTCTCCTCGACGAAAATTTCACTGCGAAGGTCTCCGATTTTGGGGCTTCCAAACTAGTTCCTTTAGATCAGGTCGATTTGAACACGATCGTGCAAGGAACTCTGGGATACCTAGATCCAGAGTATTTGCAAACTAGTCAATTGACGGAGAAGAGTGACGTGTACAGTTTCGGCGTTGTTTTGGTCGAATTGATGACCGGAAAAGCTCCTCTGTCCTTCAGCCGATCGGAGGAAGAACGGATTCTATCAATGCATTTTCTAATCGCTCTGAAACAGAATCGGCTTGGAGAAATTGTGGATAGAAGTTTAGGCGGCGATGTGGATGTGGAGCAACTGAAGGAAGTTGCGAACCTTGCGAAGAGGTGTTTGAGAGTGAAGGGAGAAGAAAGGCCGACGATGAAGGAGGTTGCTGCAGAGCTTGAAGGATTATGTCAAATGGCGTTCGGTCATCCATGGAATGTTGATAAATCTTCGTCTGTGGAAGGAGGAGAGCTTTTGGTTAATGAAGAAGATAAAAATGAAGTTCCATTTGATAGTTTGCTTTTCCCCATCAACCAAATGATACCAAACGCACGTTCTGCCAGTTTACTAGCGAGACCAACCACTAGCAAGACTAGACAAATCAGCGAGATTCGTACTAGCAAAACCAAGCAACCAGCAAAACTAGCGAGATTTGTGAGACAAAAACAGCCAGCGATACTTAGCGACATTGGTCTCGCTACTCACTTTCACACCCTCAGTGTCGCTGTCCACTCTAGCGATACCTGTCTCACCCAAAGCTTCTGTCTTTACTTCCAACTGCTAAACCGCCGCGGCAGCGCCGTCTTAGCGCCGCGACACTGTTATGCGTTCACCAAGGATGCGTCGAAGCAGCGCCATCTCGACGTCGCGATGCTACTCTGCGTCCATGCTGATGCGTTTTATACTTTAGTGCCGCGGCAGCGCTGTCTTAGCGCCGCGGCGCTGCCCTGCGTTCAACAAGGATGCGTTTTTCAGCTCTTTTTCGCCATATTCTTGCTCGGTTTTGATTTTTTTGTCGTTTCTTCTAATTTTCCTTGTTTTAACCTGAAAATCACTAGCAAACAAGTGAAATCTAATATAAAACTCCCTTAA 1695 46.61 MGLLISCSWFYIGFKRWKLIKLREYFFRQNGGLMFEQQLSIRDDAAQTAKLFTAEELRKATNNYSDDRIVGKGGFGTVYKGILPTGAAVAIKKSKIVDKTQNKQFINEVIVLSQINHRNTVKLLGCCLEEEVPLLVYEFVSNGTLFDHIHKRKSQRSIPWKIRLKIASETAGVLSYLHSSATIPIIHRDVKSTNILLDENFTAKVSDFGASKLVPLDQVDLNTIVQGTLGYLDPEYLQTSQLTEKSDVYSFGVVLVELMTGKAPLSFSRSEEERILSMHFLIALKQNRLGEIVDRSLGGDVDVEQLKEVANLAKRCLRVKGEERPTMKEVAAELEGLCQMAFGHPWNVDKSSSVEGGELLVNEEDKNEVPFDSLLFPINQMIPNARSASLLARPTTSKTRQISEIRTSKTKQPAKLARFVRQKQPAILSDIGLATHFHTLSVAVHSSDTCLTQSFCLYFQLLNRRGSAVLAPRHCYAFTKDASKQRHLDVAMLLCVHADAFYTLVPRQRCLSAAALPCVQQGCVFQLFFAIFLLGFDFFVVSSNFPCFNLKITSKQVKSNIKLP 564
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10015383 10023557 + ClCG11G007560.2 Cla11g00720 284542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00720 564 Gene3D Phosphorylase Kinase; domain 1 33 139 - -
Cla11g00720 564 SUPERFAMILY Protein kinase-like (PK-like) 48 336 IPR011009 -
Cla11g00720 564 CDD STKc_IRAK 70 337 - -
Cla11g00720 564 Gene3D Transferase(Phosphotransferase) domain 1 140 345 - -
Cla11g00720 564 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Cla11g00720 564 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 3 360 - -
Cla11g00720 564 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 3 360 IPR045274 GO:0007166
Cla11g00720 564 ProSiteProfiles Protein kinase domain profile. 64 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00720 564 Pfam Protein kinase domain 64 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00720 564 SMART serkin_6 64 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g00720 564 ProSitePatterns Protein kinases ATP-binding region signature. 70 93 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla10g01861 Cla-Chr10:34516333 Cla11g00720 Cla-Chr11:10015383 1.33E-85 dispersed
Cla11g00720 Cla-Chr11:10015383 Cla11g01863 Cla-Chr11:32150679 6.13E-140 dispersed
Cla11g00720 Cla-Chr11:10015383 Cla11g00635 Cla-Chr11:7301962 2.71E-91 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80937 PF00069 Pkinase 7.50E-51 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00720 - - cmo:103490390 682.174