Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla11g00873 | ATGGGTTCAATCAATTGGCTTGGCTTCTCTCTCTCCCCTCAACACCAACCCTCCGACCACCCTCCCGCCGCCGCCCCCTTCACCTCCGACCAAATCTCCCCCTCCGACGTCTCCGCCGTCTGCTTTGACAACCTTCCTTCTTCATATGGTGTTTATGAACCCTTCAACCGCAATAATCACTCTCAAGATTGGAATAGTATGAAGGGTTTAGGGTCGACTCAAAGTTCGGATTTTTCTGCTTTAATCGAAACCCAACACCAACCAAAGCTTGAAAATTTCCTCGGTCACCACTCTTTCACCGACCACGACCACGCCGCAGCCGCCGTCTACACCAATGCATCCGCCAACTACATGTTCCAAAATTGTTCTTTGGAGCTTCCATCTGAGGCTGGCGGCGGCGGCGGCGGTGGAAGACCCAACGCCGGTAACGGAAACACCAACAACACTAGCTCTATTGGGTTATCTATGATTAAGACATGGCTAAGAAATCAACCGGCGCCGCCGCAAGCGGTGACCAAGAGTGGCGGAGATCACGACGGTGTAGTTGGAATAGGTAATAATATTACAAGCCCACATACTTTATCACTGTCGATGAACACTGGTCCCCCACCGCAGTCGCAGTCCTCCGGCTCGGCGGCTCTACCACTTCTCACGGCCAACGGCGGCGAAAGCTCTTCCTCCGATAACAAACAAGGCAAATCTTCCGCTGCCGAGCTGGACGCTGAAAACGGCGCCGTTGAAGCTGCCCCTCGAAAATCTGTCGATACATTCGGACAAAGAACTTCCATCTACCGCGGAGTAACCAGGCATAGATGGACAGGAAGATATGAAGCTCATCTCTGGGACAATAGTTGCAGAAGAGAAGGACAGACTAGAAAAGGAAGACAAGTCTATTTGGGAGGTTATGACAAAGAAGAAAAGGCTGCTAGAGCTTACGATTTAGCGGCACTGAAATACTGGGGTACCACAACCACAACAAACTTTCCAATTAGTGATTACGAAAAAGAGTTAGAAGACATGAAGCACATGACTCGGCAAGAGTTTGTTGCGTCTCTAAGAAGGAAGAGTAGTGGGTTTTCTCGAGGAGCCTCAATTTACCGCGGAGTTACAAGACACCACCAGCATGGGAGATGGCAAGCAAGAATAGGGAGAGTTGCGGGGAATAAAGACCTCTACTTGGGAACTTTCAGTACACAAGAGGAAGCAGCTGAAGCATATGATATAGCCGCTATAAAGTTTAGGGGACTAAACGCAGTGACAAACTTTGACATGAGCCGTTACGATGTAAAAGCCATTCTTGAAAGCAACACATTACCTATCGGGGGCGCAGCCAAGCGCTTAAAAGACATCGACCACTCCGACATCCCTCTCGACCCCCAACGAACAGACGATACCATAACGTCACACCTCTCTGATGGAATAATAACCACCACCACTGCTCCCTACAGCGGTGGTGGATGGCCCACTCTCGCCTTCCACCACCATCCCTACGCCTTCCACTACCCGTATGCTACCCCACAACAACGGTTGTGGTGCAAGCAAGAACATGACACTACTGCCATCGCCGCCGACAACTTCTTCCCACATGGTGGGGCTATGGACTCGATGGACCACAGCTCGGGGTCGAGCTCCGTGGTTTACAGCAGTGGTAACGGAGATGGGTACAGCGGGAACTTCTTGATCCCAATGGGAGCGGGAGGGGCGGAAGGGAGCAGCAGCAACAACAACAATAGCGGATTGGGAGACATGGGAGAAGTGAATTTATTTGGTAGTTGTTCTAACGTGGATGATCCATACAATGCAACAAGAACGACCAATTTGTATAATTATCATAACCCCTCTCATCAGCTGCAACCACCGCCGCTGTCGTCGGGGTTGCAAGGTTCTAGCTGCAACAACTGGCTTCCTCCGGCAAGGTCGGTTTGTCACGGGGGAGCTCCGCCGCCTTTCACCATTTGGAATGACACTTAG | 1971 | 51.04 | MGSINWLGFSLSPQHQPSDHPPAAAPFTSDQISPSDVSAVCFDNLPSSYGVYEPFNRNNHSQDWNSMKGLGSTQSSDFSALIETQHQPKLENFLGHHSFTDHDHAAAAVYTNASANYMFQNCSLELPSEAGGGGGGGRPNAGNGNTNNTSSIGLSMIKTWLRNQPAPPQAVTKSGGDHDGVVGIGNNITSPHTLSLSMNTGPPPQSQSSGSAALPLLTANGGESSSSDNKQGKSSAAELDAENGAVEAAPRKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPISDYEKELEDMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGAAKRLKDIDHSDIPLDPQRTDDTITSHLSDGIITTTTAPYSGGGWPTLAFHHHPYAFHYPYATPQQRLWCKQEHDTTAIAADNFFPHGGAMDSMDHSSGSSSVVYSSGNGDGYSGNFLIPMGAGGAEGSSSNNNNSGLGDMGEVNLFGSCSNVDDPYNATRTTNLYNYHNPSHQLQPPPLSSGLQGSSCNNWLPPARSVCHGGAPPPFTIWNDT | 656 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 14128578 | 14132758 | - | ClCG11G009110.2 | Cla11g00873 | 284695 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla11g00873 | 656 | CDD | AP2 | 364 | 425 | IPR001471 | GO:0003700|GO:0006355 | |
Cla11g00873 | 656 | MobiDBLite | consensus disorder prediction | 165 | 253 | - | - | |
Cla11g00873 | 656 | PRINTS | Ethylene responsive element binding protein signature | 264 | 275 | IPR001471 | GO:0003700|GO:0006355 | |
Cla11g00873 | 656 | PRINTS | Ethylene responsive element binding protein signature | 405 | 425 | IPR001471 | GO:0003700|GO:0006355 | |
Cla11g00873 | 656 | SMART | rav1_2 | 365 | 429 | IPR001471 | GO:0003700|GO:0006355 | |
Cla11g00873 | 656 | SMART | rav1_2 | 263 | 335 | IPR001471 | GO:0003700|GO:0006355 | |
Cla11g00873 | 656 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 5 | 654 | - | - | |
Cla11g00873 | 656 | SUPERFAMILY | DNA-binding domain | 262 | 331 | IPR016177 | GO:0003677 | |
Cla11g00873 | 656 | CDD | AP2 | 262 | 331 | IPR001471 | GO:0003700|GO:0006355 | |
Cla11g00873 | 656 | ProSiteProfiles | AP2/ERF domain profile. | 263 | 329 | IPR001471 | GO:0003700|GO:0006355 | |
Cla11g00873 | 656 | MobiDBLite | consensus disorder prediction | 186 | 236 | - | - | |
Cla11g00873 | 656 | Pfam | AP2 domain | 365 | 415 | IPR001471 | GO:0003700|GO:0006355 | |
Cla11g00873 | 656 | Pfam | AP2 domain | 263 | 321 | IPR001471 | GO:0003700|GO:0006355 | |
Cla11g00873 | 656 | Gene3D | AP2/ERF domain | 365 | 425 | IPR036955 | GO:0003700|GO:0006355 | |
Cla11g00873 | 656 | Gene3D | AP2/ERF domain | 263 | 331 | IPR036955 | GO:0003700|GO:0006355 | |
Cla11g00873 | 656 | MobiDBLite | consensus disorder prediction | 130 | 151 | - | - | |
Cla11g00873 | 656 | ProSiteProfiles | AP2/ERF domain profile. | 365 | 423 | IPR001471 | GO:0003700|GO:0006355 | |
Cla11g00873 | 656 | MobiDBLite | consensus disorder prediction | 10 | 29 | - | - | |
Cla11g00873 | 656 | SUPERFAMILY | DNA-binding domain | 364 | 425 | IPR016177 | GO:0003677 | |
Cla11g00873 | 656 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL1 | 5 | 654 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla02g02264 | Cla-Chr2:37751304 | Cla11g00873 | Cla-Chr11:14128578 | 4.25E-135 | dispersed | |
Cla04g00866 | Cla-Chr4:23672593 | Cla11g00873 | Cla-Chr11:14128578 | 1.23E-08 | dispersed | |
Cla06g01334 | Cla-Chr6:26737601 | Cla11g00873 | Cla-Chr11:14128578 | 2.71E-12 | dispersed | |
Cla07g01336 | Cla-Chr7:30575443 | Cla11g00873 | Cla-Chr11:14128578 | 5.06E-120 | dispersed | |
Cla10g00737 | Cla-Chr10:12068184 | Cla11g00873 | Cla-Chr11:14128578 | 2.02E-123 | dispersed | |
Cla10g01418 | Cla-Chr10:29236469 | Cla11g00873 | Cla-Chr11:14128578 | 3.21E-09 | dispersed | |
Cla11g00873 | Cla-Chr11:14128578 | Cla08g01641 | Cla-Chr8:29034235 | 1.00E-116 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62034 | PF00847 | AP2 | 1.50E-12 | CL0081 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla11g00873 | K09285 | - | csv:101219473 | 1060.83 |