Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00884 ATGGGAATTATTAGTTTGGGAGAAGAATGTTACATGATGAGTTTAGGAAGTGGAGTAGTGTTGGGAGTGATAACGTGGTTGGTTTGGACATGGATCATTGTTCATAGATGGAACCAAAGGAAGAAGACGACAGGTCCTAAAACATGGCCACTCGTAGGAGCAGCAATCGAACAGTTTTTAAATTACCACAGAATGCATGATTGGCTTCTTGGTTACCTTAATCTCTCCAAAACTGTTGTGGTTCCTATGCCTTTCACTACTTATACTTACATTGCTGACCCTGCCAATGTTCAGCATATTCTCAAGACCAACTTTGCTAATTATCCCAAGGGTGATGTGTATCATTCATATATGGAAGTGCTTCTTGGAGATGGGATATTCAACGTAGATGGAGAGCTATGGAGAAAACAAAGGAAAACTGCGAGCTTCGAATTTGCATCTAAGAATTTGAGGGATTTCAGTACCTTAGTTTTCAGAGAGTACACTCTGAAGCTATCAAATATTTTAACAAGGGCCTCTTTAGACAACCAACAAATTGACATGCAGGAATTGTTGATGAGAATGACCTTAGACTCGATATGCAAGGTGGGATTTGGTGTTGAAATTGGATCATTGGCTCCAAATTTGCCAGAAAATGGGTTTGCTAAGGCGTTTGACACAGCCAACATGATCGTCACCCTTCGTTTCATCGATCCTTTATGGAAAATTAAAAAATTTCTGAATTTGGGATCTGAAGCTCTTCTTGATAGGTCCATTAAAATCATCGATGATTTCACCTACTCTGTCATTGCCACTAGGAAAAAAGAGATGCAACAACAACCTCAAACCACATCCAAAGATGCCAATAAGGAGAAAAAACATGACATATTGTCAAGGTTTATTGAGTTAGGCGAAGACCCAAACAACAATTTCACAAACAAAAGCTTAAGAGATGTTGTTCTAAACTTCGTGATTGCTGGACGTGACACAACAGCTGCAACTCTTTCATGGGCTATTTATATGGTAATGACTCATTCTCATGTAGCTCACAAACTTTACTCAGAGCTCAAGAATTTCGAAGAAGAAAGAGCCAAAGAAGAAAACATTTCATTGCTTCAATATCAACCAACTGATCTTCAATCCTTTGAGAGAAGAGTAATGCAATTTTCACAAATCCTCAATTATGATTCCCTTGCTCGATTACACTATTTGCATGCTACCATCACTGAGACACTTCGTCTTTACCCTGCAGTCCCTCAGGACCCAAAGGGAATTTTGGAGGATGATGTATTGCCAGATGGTACAAAGGTAAGAGCAGGAGGAATGGTGACATATGTTCCTTACTCAATGGGAAGAATGGAATACAATTGGGGTTGTGATGCAACTTCATTTAACCCTGAAAGATGGCTCAAACAAGGCATTTTCCACAATGAATCTCCATTCAAGTTCACAGCTTTTCAGGCTGGACCAAGGATTTGCATGGGAAAGGACTCAGCATATCTACAGATGAAAATGGCTCTTGCCATTTTGTGCAGATTCTACAAATTTAGTTTGGTGAGTGGACATCGAGTCAACTACAGAATGATGACTATTCTCTCCATGGCTAATGGCTTGAAAGTTACCGTGGCTCCACGCTCTTAA 1620 39.81 MGIISLGEECYMMSLGSGVVLGVITWLVWTWIIVHRWNQRKKTTGPKTWPLVGAAIEQFLNYHRMHDWLLGYLNLSKTVVVPMPFTTYTYIADPANVQHILKTNFANYPKGDVYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTLVFREYTLKLSNILTRASLDNQQIDMQELLMRMTLDSICKVGFGVEIGSLAPNLPENGFAKAFDTANMIVTLRFIDPLWKIKKFLNLGSEALLDRSIKIIDDFTYSVIATRKKEMQQQPQTTSKDANKEKKHDILSRFIELGEDPNNNFTNKSLRDVVLNFVIAGRDTTAATLSWAIYMVMTHSHVAHKLYSELKNFEEERAKEENISLLQYQPTDLQSFERRVMQFSQILNYDSLARLHYLHATITETLRLYPAVPQDPKGILEDDVLPDGTKVRAGGMVTYVPYSMGRMEYNWGCDATSFNPERWLKQGIFHNESPFKFTAFQAGPRICMGKDSAYLQMKMALAILCRFYKFSLVSGHRVNYRMMTILSMANGLKVTVAPRS 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14972065 14985207 - ClCG11G009220.1 Cla11g00884 284706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00884 539 Gene3D Cytochrome P450 29 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00884 539 PANTHER CYTOCHROME P450 704B1 22 536 - -
Cla11g00884 539 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00884 539 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00884 539 PRINTS E-class P450 group I signature 398 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00884 539 PRINTS E-class P450 group I signature 476 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00884 539 PRINTS E-class P450 group I signature 486 509 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00884 539 SUPERFAMILY Cytochrome P450 35 538 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00884 539 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00884 539 PRINTS P450 superfamily signature 399 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00884 539 PRINTS P450 superfamily signature 477 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00884 539 PRINTS P450 superfamily signature 486 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00884 539 Coils Coil 342 362 - -
Cla11g00884 539 Pfam Cytochrome P450 45 532 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g00884 539 PANTHER CYTOCHROME P450 22 536 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g00218 Cla-Chr5:1934670 Cla11g00884 Cla-Chr11:14972065 5.78E-136 dispersed
Cla09g00419 Cla-Chr9:3995408 Cla11g00884 Cla-Chr11:14972065 1.75E-125 dispersed
Cla11g00884 Cla-Chr11:14972065 Cla10g01144 Cla-Chr10:25950852 2.09E-107 dispersed
Cla11g00884 Cla-Chr11:14972065 Cla06g00341 Cla-Chr6:4336709 1.40E-127 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00884 K20495 - csv:101222076 928.317