Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00902 ATGGATAATAATTACCAAATATTCTTCCCAGCTTCCTCCTCCTCCCATAATTCACTGCCAACTACGCCCATGGATCATCAGTTCCAAGAAGAAAGTAGTGTGAAAAAAACAAGTAGTGGATCTATGAAATCGGAGAAGAAGATAAGAAAAGGGAGATTTGCGTTTGAAACCAGGAGCCAAGTTGATGTGCTTGACGATGGCTATCGCTGGAGAAAATATGGTCAAAAGGCTGTTAAGAACGACAAGTTTCCCAGGAGCTACTATAAGTGTTCACATCAAGGATGTAAAGTGAAGAAGCAAATTCAACGGCTTACAAATGATGAAGGAGTGGTATTAACAACCTACGAAGGAGTTCATTCCCATCCCATCGAAACCCCTCAAGATAACTTTCAACATATCTTGACTCACATGCAAATTTACCCTTCTTCCTTTTAA 435 40.0 MDNNYQIFFPASSSSHNSLPTTPMDHQFQEESSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIYPSSF 144
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 15370665 15371933 + ClCG11G009430.1 Cla11g00902 284724

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00902 144 Pfam WRKY DNA -binding domain 65 122 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cla11g00902 144 SMART WRKY_cls 64 123 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cla11g00902 144 MobiDBLite consensus disorder prediction 9 39 - -
Cla11g00902 144 Gene3D WRKY domain 48 124 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cla11g00902 144 SUPERFAMILY WRKY DNA-binding domain 57 123 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cla11g00902 144 ProSiteProfiles WRKY domain profile. 59 124 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cla11g00902 144 MobiDBLite consensus disorder prediction 9 47 - -
Cla11g00902 144 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 29 140 IPR044810 GO:0003700
Cla11g00902 144 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 29 140 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00902 - - - csv:101212622 223.402
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cla05g01424 Cla11g00902 CCT
Cla05g01424 Cla11g00902 ECH
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01463 Cla-Chr7:31931187 Cla11g00902 Cla-Chr11:15370665 1.05E-58 dispersed
Cla11g00902 Cla-Chr11:15370665 Cla06g00419 Cla-Chr6:5093567 3.84E-32 dispersed
Cla11g00902 Cla-Chr11:15370665 Cla07g00746 Cla-Chr7:20796642 4.49E-34 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi14g1147 . Blo11g00612 Bda01g01064 . Bpe02g01307 . . . Cmo14g00740 . Cma11g01514 Cma14g00727 Car11g01302 Car14g00663 . Cpe03g00631 . . . . . . . . Cla11g00902 . . . Clacu11g0932 Cmu11g0779 . . . Cone2ag0036 Cone16ag1003 . . Chy06g01543 Cme06g01785 . . Bda07g01384 . . Bpe11g01486 . . . . . . . . . . . Bhi01g02098 . . . Hepe02g1696 . . Cla05g01424 Cam05g1512 Cec05g1527 Cco05g1560 Clacu05g1519 Cmu05g1427 Cre05g1530 . Csa03g02485 . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cla02g00274 . 270 518 WRKY Transcription Factor Family AT2G04880 58.3 1.5e-77 287.3
Cla03g00015 . 236 476 WRKY Transcription Factor Family AT5G56270 53.6 2.8e-69 260.4
Cla05g02414 . 20 500 WRKY Transcription Factor Family AT2G03340 51.4 9.4e-118 421.0
Cla11g00430 . 12 503 WRKY Transcription Factor Family AT2G03340 52.3 4.7e-117 418.7
Cla03g00015 . 228 489 WRKY Transcription Factor Family AT2G03340 53.2 1.1e-65 248.1
Cla05g02414 . 110 500 WRKY Transcription Factor Family AT1G13960 56.3 1.7e-97 353.2
Cla11g00430 . 139 503 WRKY Transcription Factor Family AT1G13960 51.3 2.0e-82 303.1
Cla03g00015 . 227 517 WRKY Transcription Factor Family AT1G13960 51.2 5.1e-70 261.9
Cla10g02125 . 167 394 WRKY Transcription Factor Family AT1G13960 53.7 2.9e-65 246.1
Cla10g00433 . 206 456 WRKY Transcription Factor Family AT1G13960 51.7 1.6e-63 240.4
Cla10g00433 . 25 575 WRKY Transcription Factor Family AT4G26640 52.6 1.7e-135 479.9
Cla11g00430 . 230 469 WRKY Transcription Factor Family AT4G26640 51.0 4.2e-65 246.1
Cla03g00015 . 225 475 WRKY Transcription Factor Family AT5G07100 57.3 7.6e-69 257.3
Cla10g02125 . 152 381 WRKY Transcription Factor Family AT5G07100 57.7 2.2e-68 255.8
Cla06g01236 . 192 513 WRKY Transcription Factor Family AT4G30935 60.3 1.8e-99 360.1
Cla03g00015 . 234 583 WRKY Transcription Factor Family AT2G38470 57.6 4.6e-96 349.0
Cla10g00374 . 348 632 WRKY Transcription Factor Family AT2G38470 52.1 2.4e-68 256.9
Cla10g00376 . 327 611 WRKY Transcription Factor Family AT2G38470 52.1 2.4e-68 256.9
Cla05g02414 . 200 455 WRKY Transcription Factor Family AT2G38470 54.2 2.1e-64 243.8
Cla10g00433 . 214 456 WRKY Transcription Factor Family AT2G38470 52.9 2.5e-62 236.9
Cla03g00015 . 236 476 WRKY Transcription Factor Family AT4G26440 51.9 1.0e-64 245.0
Cla11g00902 CCT,ECH 2 141 WRKY Transcription Factor Family AT3G01970 52.7 2.5e-39 158.7
Cla05g01424 CCT,ECH 80 171 WRKY Transcription Factor Family AT3G01970 77.2 1.2e-38 156.4
Cla07g01463 . 123 217 WRKY Transcription Factor Family AT3G01970 72.6 6.2e-38 154.1
Cla02g00199 . 90 528 WRKY Transcription Factor Family AT1G62300 50.4 3.3e-100 362.8
Cla06g01605 CCT,ECH 202 362 WRKY Transcription Factor Family AT1G62300 56.5 1.5e-41 167.9
Cla05g01057 . 215 327 WRKY Transcription Factor Family AT1G62300 69.9 5.0e-40 162.9
Cla05g01057 . 64 326 WRKY Transcription Factor Family AT1G68150 52.5 6.1e-58 221.9
Cla01g02125 . 333 430 WRKY Transcription Factor Family AT1G68150 74.5 5.9e-37 152.1
Cla01g02125 . 42 577 WRKY Transcription Factor Family AT4G22070 50.6 2.9e-109 392.9
Cla05g01057 . 207 327 WRKY Transcription Factor Family AT4G22070 66.1 5.4e-39 159.5
Cla06g01605 CCT,ECH 193 362 WRKY Transcription Factor Family AT4G22070 53.2 1.0e-37 155.2
Cla02g00199 . 107 511 WRKY Transcription Factor Family AT4G04450 51.8 4.1e-90 328.9
Cla06g01605 CCT,ECH 202 371 WRKY Transcription Factor Family AT4G04450 54.7 9.3e-42 168.3
Cla02g00199 . 288 376 WRKY Transcription Factor Family AT1G18860 76.4 2.2e-37 154.1
Cla02g00099 CCT 113 232 WRKY Transcription Factor Family AT2G44745 62.4 7.0e-38 154.5
Cla01g01558 CCT 140 224 WRKY Transcription Factor Family AT2G44745 78.8 1.0e-36 150.6
Cla02g00099 CCT 139 246 WRKY Transcription Factor Family AT4G39410 78.8 1.3e-45 180.6
Cla01g01558 CCT 133 243 WRKY Transcription Factor Family AT4G39410 73.0 3.8e-42 169.1
Cla07g00746 . 90 186 WRKY Transcription Factor Family AT5G41570 80.4 1.2e-43 173.3
Cla01g02377 . 85 258 WRKY Transcription Factor Family AT4G18170 57.0 2.3e-45 179.9
Cla09g02191 . 118 220 WRKY Transcription Factor Family AT4G18170 74.8 1.1e-39 161.0
Cla05g00716 CCT,ECH 167 341 WRKY Transcription Factor Family AT5G49520 50.3 5.2e-39 159.1
Cla09g02191 . 108 266 WRKY Transcription Factor Family AT5G49520 54.3 1.5e-38 157.5
Cla07g00746 . 79 188 WRKY Transcription Factor Family AT1G64000 78.2 2.4e-45 179.1
Cla05g00137 . 75 168 WRKY Transcription Factor Family AT1G64000 70.2 9.0e-37 150.6
Cla08g01030 . 108 287 WRKY Transcription Factor Family AT1G69310 59.6 3.3e-51 199.1
Cla06g00419 CCT,ECH 167 258 WRKY Transcription Factor Family AT1G69310 78.3 5.4e-38 155.2
Cla01g02377 . 77 250 WRKY Transcription Factor Family AT1G29860 58.2 6.0e-50 194.9
Cla09g02191 . 130 217 WRKY Transcription Factor Family AT1G29860 84.1 3.7e-39 159.1
Cla07g01463 . 119 217 WRKY Transcription Factor Family AT5G13080 82.8 3.3e-44 174.9
Cla11g00902 CCT,ECH 3 142 WRKY Transcription Factor Family AT5G13080 61.8 2.0e-41 165.6
Cla05g01424 CCT,ECH 77 173 WRKY Transcription Factor Family AT5G13080 81.4 2.0e-41 165.6
Cla05g02650 . 1 294 WRKY Transcription Factor Family AT4G31550 60.7 2.5e-82 302.4
Cla06g01369 . 1 224 WRKY Transcription Factor Family AT4G31550 50.4 1.8e-51 199.9
Cla05g02650 . 1 336 WRKY Transcription Factor Family AT2G24570 56.3 1.5e-92 336.7
Cla06g01369 . 1 274 WRKY Transcription Factor Family AT2G24570 50.2 3.3e-68 255.8
Cla09g00705 . 194 339 WRKY Transcription Factor Family AT2G24570 54.7 1.5e-41 167.2
Cla09g00706 . 194 339 WRKY Transcription Factor Family AT2G24570 54.7 1.5e-41 167.2
Cla09g00705 . 2 349 WRKY Transcription Factor Family AT2G30590 50.5 1.3e-87 320.5
Cla09g00706 . 2 349 WRKY Transcription Factor Family AT2G30590 50.5 1.3e-87 320.5
Cla07g00061 . 1 341 WRKY Transcription Factor Family AT2G30590 53.9 7.0e-86 314.7
Cla05g02069 . 213 373 WRKY Transcription Factor Family AT2G30590 59.5 1.6e-45 180.6
Cla01g01663 CCT,ECH 119 282 WRKY Transcription Factor Family AT2G30590 57.2 6.7e-44 175.3
Cla02g00782 CCT,ECH 156 282 WRKY Transcription Factor Family AT2G30590 67.7 1.6e-42 170.6
Cla06g01369 . 120 262 WRKY Transcription Factor Family AT2G30590 56.5 5.3e-41 165.6
Cla09g00705 . 2 349 WRKY Transcription Factor Family AT5G28650 51.4 1.2e-78 290.4
Cla09g00706 . 2 349 WRKY Transcription Factor Family AT5G28650 51.4 1.2e-78 290.4
Cla07g00061 . 1 341 WRKY Transcription Factor Family AT5G28650 50.6 4.7e-78 288.5
Cla01g01663 CCT,ECH 132 291 WRKY Transcription Factor Family AT5G28650 60.0 2.9e-43 172.9
Cla02g00782 CCT,ECH 177 284 WRKY Transcription Factor Family AT5G28650 71.3 3.3e-39 159.5
Cla01g02476 CCT 193 314 WRKY Transcription Factor Family AT1G30650 82.0 3.3e-55 213.0
Cla05g00141 . 129 225 WRKY Transcription Factor Family AT1G30650 65.5 8.9e-37 151.8
Cla03g00810 CCT 149 288 WRKY Transcription Factor Family AT4G01250 56.8 4.3e-38 155.6
Cla05g00141 . 133 233 WRKY Transcription Factor Family AT5G52830 73.5 3.1e-40 162.9
Cla03g00810 CCT 3 277 WRKY Transcription Factor Family AT2G34830 50.8 4.0e-61 232.6
Cla01g02476 CCT 192 314 WRKY Transcription Factor Family AT2G34830 82.9 5.1e-56 215.7
Cla05g00141 . 130 225 WRKY Transcription Factor Family AT2G34830 67.9 1.4e-37 154.5
Cla03g00699 . 48 248 WRKY Transcription Factor Family AT1G29280 53.6 2.0e-52 203.0
Cla07g00246 . 42 300 WRKY Transcription Factor Family AT3G58710 55.2 4.6e-47 185.3
Cla02g00274 . 270 518 WRKY Transcription Factor Family AT2G04880 58.3 1.5e-77 287.3
Cla05g02650 . 1 294 WRKY Transcription Factor Family AT4G31550 60.7 2.5e-82 302.4
Cla06g01369 . 1 224 WRKY Transcription Factor Family AT4G31550 50.4 1.8e-51 199.9
Cla02g00099 CCT 113 232 WRKY Transcription Factor Family AT2G44745 62.4 7.0e-38 154.5
Cla01g01558 CCT 140 224 WRKY Transcription Factor Family AT2G44745 78.8 1.0e-36 150.6
Cla02g00099 CCT 139 246 WRKY Transcription Factor Family AT4G39410 78.8 1.3e-45 180.6
Cla01g01558 CCT 133 243 WRKY Transcription Factor Family AT4G39410 73.0 3.8e-42 169.1
Cla01g02476 CCT 193 314 WRKY Transcription Factor Family AT1G30650 82.0 3.3e-55 213.0
Cla05g00141 . 129 225 WRKY Transcription Factor Family AT1G30650 65.5 8.9e-37 151.8
Cla05g02650 . 1 336 WRKY Transcription Factor Family AT2G24570 56.3 1.5e-92 336.7
Cla06g01369 . 1 274 WRKY Transcription Factor Family AT2G24570 50.2 3.3e-68 255.8
Cla09g00705 . 194 339 WRKY Transcription Factor Family AT2G24570 54.7 1.5e-41 167.2
Cla09g00706 . 194 339 WRKY Transcription Factor Family AT2G24570 54.7 1.5e-41 167.2
Cla03g00015 . 236 476 WRKY Transcription Factor Family AT5G56270 53.6 2.8e-69 260.4
Cla10g00433 . 25 575 WRKY Transcription Factor Family AT4G26640 52.6 1.7e-135 479.9
Cla11g00430 . 230 469 WRKY Transcription Factor Family AT4G26640 51.0 4.2e-65 246.1
Cla09g00705 . 2 349 WRKY Transcription Factor Family AT2G30590 50.5 1.3e-87 320.5
Cla09g00706 . 2 349 WRKY Transcription Factor Family AT2G30590 50.5 1.3e-87 320.5
Cla07g00061 . 1 341 WRKY Transcription Factor Family AT2G30590 53.9 7.0e-86 314.7
Cla05g02069 . 213 373 WRKY Transcription Factor Family AT2G30590 59.5 1.6e-45 180.6
Cla01g01663 CCT,ECH 119 282 WRKY Transcription Factor Family AT2G30590 57.2 6.7e-44 175.3
Cla02g00782 CCT,ECH 156 282 WRKY Transcription Factor Family AT2G30590 67.7 1.6e-42 170.6
Cla06g01369 . 120 262 WRKY Transcription Factor Family AT2G30590 56.5 5.3e-41 165.6
Cla03g00810 CCT 149 288 WRKY Transcription Factor Family AT4G01250 56.8 4.3e-38 155.6
Cla07g00746 . 90 186 WRKY Transcription Factor Family AT5G41570 80.4 1.2e-43 173.3
Cla03g00015 . 225 475 WRKY Transcription Factor Family AT5G07100 57.3 7.6e-69 257.3
Cla10g02125 . 152 381 WRKY Transcription Factor Family AT5G07100 57.7 2.2e-68 255.8
Cla05g00141 . 133 233 WRKY Transcription Factor Family AT5G52830 73.5 3.1e-40 162.9
Cla01g02377 . 85 258 WRKY Transcription Factor Family AT4G18170 57.0 2.3e-45 179.9
Cla09g02191 . 118 220 WRKY Transcription Factor Family AT4G18170 74.8 1.1e-39 161.0
Cla05g02414 . 20 500 WRKY Transcription Factor Family AT2G03340 51.4 9.4e-118 421.0
Cla11g00430 . 12 503 WRKY Transcription Factor Family AT2G03340 52.3 4.7e-117 418.7
Cla03g00015 . 228 489 WRKY Transcription Factor Family AT2G03340 53.2 1.1e-65 248.1
Cla01g02125 . 42 577 WRKY Transcription Factor Family AT4G22070 50.6 2.9e-109 392.9
Cla05g01057 . 207 327 WRKY Transcription Factor Family AT4G22070 66.1 5.4e-39 159.5
Cla06g01605 CCT,ECH 193 362 WRKY Transcription Factor Family AT4G22070 53.2 1.0e-37 155.2
Cla06g01236 . 192 513 WRKY Transcription Factor Family AT4G30935 60.3 1.8e-99 360.1
Cla03g00015 . 234 583 WRKY Transcription Factor Family AT2G38470 57.6 4.6e-96 349.0
Cla10g00374 . 348 632 WRKY Transcription Factor Family AT2G38470 52.1 2.4e-68 256.9
Cla10g00376 . 327 611 WRKY Transcription Factor Family AT2G38470 52.1 2.4e-68 256.9
Cla05g02414 . 200 455 WRKY Transcription Factor Family AT2G38470 54.2 2.1e-64 243.8
Cla10g00433 . 214 456 WRKY Transcription Factor Family AT2G38470 52.9 2.5e-62 236.9
Cla03g00015 . 236 476 WRKY Transcription Factor Family AT4G26440 51.9 1.0e-64 245.0
Cla03g00810 CCT 3 277 WRKY Transcription Factor Family AT2G34830 50.8 4.0e-61 232.6
Cla01g02476 CCT 192 314 WRKY Transcription Factor Family AT2G34830 82.9 5.1e-56 215.7
Cla05g00141 . 130 225 WRKY Transcription Factor Family AT2G34830 67.9 1.4e-37 154.5
Cla05g02414 . 110 500 WRKY Transcription Factor Family AT1G13960 56.3 1.7e-97 353.2
Cla11g00430 . 139 503 WRKY Transcription Factor Family AT1G13960 51.3 2.0e-82 303.1
Cla03g00015 . 227 517 WRKY Transcription Factor Family AT1G13960 51.2 5.1e-70 261.9
Cla10g02125 . 167 394 WRKY Transcription Factor Family AT1G13960 53.7 2.9e-65 246.1
Cla10g00433 . 206 456 WRKY Transcription Factor Family AT1G13960 51.7 1.6e-63 240.4
Cla02g00199 . 107 511 WRKY Transcription Factor Family AT4G04450 51.8 4.1e-90 328.9
Cla06g01605 CCT,ECH 202 371 WRKY Transcription Factor Family AT4G04450 54.7 9.3e-42 168.3
Cla11g00902 CCT,ECH 2 141 WRKY Transcription Factor Family AT3G01970 52.7 2.5e-39 158.7
Cla05g01424 CCT,ECH 80 171 WRKY Transcription Factor Family AT3G01970 77.2 1.2e-38 156.4
Cla07g01463 . 123 217 WRKY Transcription Factor Family AT3G01970 72.6 6.2e-38 154.1
Cla05g00716 CCT,ECH 167 341 WRKY Transcription Factor Family AT5G49520 50.3 5.2e-39 159.1
Cla09g02191 . 108 266 WRKY Transcription Factor Family AT5G49520 54.3 1.5e-38 157.5
Cla07g00746 . 79 188 WRKY Transcription Factor Family AT1G64000 78.2 2.4e-45 179.1
Cla05g00137 . 75 168 WRKY Transcription Factor Family AT1G64000 70.2 9.0e-37 150.6
Cla08g01030 . 108 287 WRKY Transcription Factor Family AT1G69310 59.6 3.3e-51 199.1
Cla06g00419 CCT,ECH 167 258 WRKY Transcription Factor Family AT1G69310 78.3 5.4e-38 155.2
Cla02g00199 . 90 528 WRKY Transcription Factor Family AT1G62300 50.4 3.3e-100 362.8
Cla06g01605 CCT,ECH 202 362 WRKY Transcription Factor Family AT1G62300 56.5 1.5e-41 167.9
Cla05g01057 . 215 327 WRKY Transcription Factor Family AT1G62300 69.9 5.0e-40 162.9
Cla02g00199 . 288 376 WRKY Transcription Factor Family AT1G18860 76.4 2.2e-37 154.1
Cla03g00699 . 48 248 WRKY Transcription Factor Family AT1G29280 53.6 2.0e-52 203.0
Cla07g00246 . 42 300 WRKY Transcription Factor Family AT3G58710 55.2 4.6e-47 185.3
Cla01g02377 . 77 250 WRKY Transcription Factor Family AT1G29860 58.2 6.0e-50 194.9
Cla09g02191 . 130 217 WRKY Transcription Factor Family AT1G29860 84.1 3.7e-39 159.1
Cla09g00705 . 2 349 WRKY Transcription Factor Family AT5G28650 51.4 1.2e-78 290.4
Cla09g00706 . 2 349 WRKY Transcription Factor Family AT5G28650 51.4 1.2e-78 290.4
Cla07g00061 . 1 341 WRKY Transcription Factor Family AT5G28650 50.6 4.7e-78 288.5
Cla01g01663 CCT,ECH 132 291 WRKY Transcription Factor Family AT5G28650 60.0 2.9e-43 172.9
Cla02g00782 CCT,ECH 177 284 WRKY Transcription Factor Family AT5G28650 71.3 3.3e-39 159.5
Cla07g01463 . 119 217 WRKY Transcription Factor Family AT5G13080 82.8 3.3e-44 174.9
Cla11g00902 CCT,ECH 3 142 WRKY Transcription Factor Family AT5G13080 61.8 2.0e-41 165.6
Cla05g01424 CCT,ECH 77 173 WRKY Transcription Factor Family AT5G13080 81.4 2.0e-41 165.6
Cla05g01057 . 64 326 WRKY Transcription Factor Family AT1G68150 52.5 6.1e-58 221.9
Cla01g02125 . 333 430 WRKY Transcription Factor Family AT1G68150 74.5 5.9e-37 152.1
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000978 3 3 1 1 3 3 4 3 3 2 3 3 3 3 3 3 3 3 3 3 2 3 3 2 3 3 2 3 4 3 84
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62036 PF03106 WRKY 3.60E-25 CL0274 Cla TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cla11g00902 Cla_Chr11 FPKM 0.0 0.0 0.0 0.0 0.51036 0.997778 0.447938 0.0 0.0 0.0