Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla11g00902 | ATGGATAATAATTACCAAATATTCTTCCCAGCTTCCTCCTCCTCCCATAATTCACTGCCAACTACGCCCATGGATCATCAGTTCCAAGAAGAAAGTAGTGTGAAAAAAACAAGTAGTGGATCTATGAAATCGGAGAAGAAGATAAGAAAAGGGAGATTTGCGTTTGAAACCAGGAGCCAAGTTGATGTGCTTGACGATGGCTATCGCTGGAGAAAATATGGTCAAAAGGCTGTTAAGAACGACAAGTTTCCCAGGAGCTACTATAAGTGTTCACATCAAGGATGTAAAGTGAAGAAGCAAATTCAACGGCTTACAAATGATGAAGGAGTGGTATTAACAACCTACGAAGGAGTTCATTCCCATCCCATCGAAACCCCTCAAGATAACTTTCAACATATCTTGACTCACATGCAAATTTACCCTTCTTCCTTTTAA | 435 | 40.0 | MDNNYQIFFPASSSSHNSLPTTPMDHQFQEESSVKKTSSGSMKSEKKIRKGRFAFETRSQVDVLDDGYRWRKYGQKAVKNDKFPRSYYKCSHQGCKVKKQIQRLTNDEGVVLTTYEGVHSHPIETPQDNFQHILTHMQIYPSSF | 144 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 15370665 | 15371933 | + | ClCG11G009430.1 | Cla11g00902 | 284724 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla11g00902 | 144 | Pfam | WRKY DNA -binding domain | 65 | 122 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla11g00902 | 144 | SMART | WRKY_cls | 64 | 123 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla11g00902 | 144 | MobiDBLite | consensus disorder prediction | 9 | 39 | - | - | |
Cla11g00902 | 144 | Gene3D | WRKY domain | 48 | 124 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cla11g00902 | 144 | SUPERFAMILY | WRKY DNA-binding domain | 57 | 123 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cla11g00902 | 144 | ProSiteProfiles | WRKY domain profile. | 59 | 124 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cla11g00902 | 144 | MobiDBLite | consensus disorder prediction | 9 | 47 | - | - | |
Cla11g00902 | 144 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 29 | 140 | IPR044810 | GO:0003700 | |
Cla11g00902 | 144 | PANTHER | WRKY TRANSCRIPTION FACTOR 75-RELATED | 29 | 140 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla05g01424 | Cla11g00902 | CCT | |
Cla05g01424 | Cla11g00902 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla07g01463 | Cla-Chr7:31931187 | Cla11g00902 | Cla-Chr11:15370665 | 1.05E-58 | dispersed | |
Cla11g00902 | Cla-Chr11:15370665 | Cla06g00419 | Cla-Chr6:5093567 | 3.84E-32 | dispersed | |
Cla11g00902 | Cla-Chr11:15370665 | Cla07g00746 | Cla-Chr7:20796642 | 4.49E-34 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62036 | PF03106 | WRKY | 3.60E-25 | CL0274 | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla11g00902 | - | - | csv:101212622 | 223.402 |