Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00909 ATGGGTCGGTGGAATGAGAAACTTGTAGCCTTCATTAACAATAGATGGTTAGTTTTTGTGGCTGCAATATGGCTTCAATCATGCGCTGGAATTGGGTATCTTTTTGGAAGCATATCGCCGGTGATCAAAACCAATTTGAGTTACAATCAGAGGCAAATTGCACGTCTCGGTGTCGCGAAAGACCTTGGCGACAGCGTCGGCATTTTGGCCGCAACCTTGTCGGAGATACTGCCCTTCTGGGGAGCTCTCTTGGTCGGTGCTATCCATAACTTTGTTGGGTATGGTTGGATTTGGCTCATCGTCTCTGGTCGAGCTCCCGTTTTGCCTCTCTGGGCTATGTGCGTTCTTGTATTTATGGGAACGAATGGGGAGACGTACTTCAATACAGTTTCACTGGTTTCTTGCGTACAAAACTTTCCGAAAAGTAGGGGCCCTGTGGTTGGGATTCTGAAAGGCTTTGCTGGTTTAAGTGGTGCAATTTTGACTCAGATATATGCAATCATGCATTCTCCTGATTCAGCCAATCTTATATTCATGATTGCAGTAGGTCCTGCACTGGTGGCTATTGGTGTGATGTTTTTAATCAGACCTGTCGCCGGTCATAGACAAGTAAGGCCGTCCGATGGCATGAGCTTTACTAGTGTTTATGGTGTCTGCCTCCTTTTGGCTGCTTATTTGATGGGAGTCATGCTTGTTGAGGATCTTGTTACCTTGAGCCCCACTGTGATAGGCATTTTTACTGCAGTTATGTTTGTCATCCTTCTTACGCCCTTTTTGATTCCGGTGACATTGACTTTTAGCTCGGAGACGACAACATATGCTGAGCAAGAGGCTCTCCTACCACCGTCAGAGAAACAAGAACCTGCTAGAACTGAACCAGATGGTAATGAAGTGATATTTAGTGAGGTGGAAGACGAAAAATCAGAGGGAGAGGACTTACTTCCTGCATCAGAGAGACAAAAACGCATTGCTCAATTGCAAGCGAAACTATTGCAAGCAGCTGCAGAAGGAGCAGTAAGAGTCAAGAGGAGGAAGGGTCCACGTAGAGGGGAAGACTTCACTTTGGGTCAAGCTTTAATCAAAGCAGACTTTTGGCTTATATTTTCCTCCCATCTCCTTGGTTCTGGAACTGGATTGACTGTGATCGATAACCTCGGACAGATGAGCCAGTCTTTAGGTTATGATAATACACATATTTTCGTATCCCTGATCAGCATATGGAACTTTCTCGGCCGTGTTGGTGGTGGATACCTCTCTGAGATTGTTGTGAGAGATTTTGCTTATCCAAGACCCATTGCAATGACGATTGCACAATTCCTTATGATATTTGGACATGTCTTCATCGGTATGGGATGGCCTGGGGCAATGTACATTGGTACTCTCATAACGGGGCTCGGGTACGGGGCTCACTGGGCAATTGTGCCTGCTACTGCCTCTGAATTGTTTGGCTTGAAAAAGTTTGGGGCTTTATACAACTTCATCACTCTCTCAACTCCTGTAGGATCGCTGATATTTTCTGGCTTAATCGCGAGCAGTATATATGATAGTGAAGCAGAGAAGCAAGCTCATAATCACATCTCACAGCTGCAGAGCTCCTCGTCATTTTGGTTCACTAGACTCTACGCCGATGGACCGCACAAGTGCGAGGGTGCTATATGTTTCTTTCTAACTTGTATGATAATGGCTGGATTCTGTGCGATTGCAGGCATGTTAAGTTTAATCTTGGTGTATCGGACGAGGGGGGTTTACTACAACCTCTATGGAAAATCTCGTACATCAACGCTTTCGTAG 1791 45.51 MGRWNEKLVAFINNRWLVFVAAIWLQSCAGIGYLFGSISPVIKTNLSYNQRQIARLGVAKDLGDSVGILAATLSEILPFWGALLVGAIHNFVGYGWIWLIVSGRAPVLPLWAMCVLVFMGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYAIMHSPDSANLIFMIAVGPALVAIGVMFLIRPVAGHRQVRPSDGMSFTSVYGVCLLLAAYLMGVMLVEDLVTLSPTVIGIFTAVMFVILLTPFLIPVTLTFSSETTTYAEQEALLPPSEKQEPARTEPDGNEVIFSEVEDEKSEGEDLLPASERQKRIAQLQAKLLQAAAEGAVRVKRRKGPRRGEDFTLGQALIKADFWLIFSSHLLGSGTGLTVIDNLGQMSQSLGYDNTHIFVSLISIWNFLGRVGGGYLSEIVVRDFAYPRPIAMTIAQFLMIFGHVFIGMGWPGAMYIGTLITGLGYGAHWAIVPATASELFGLKKFGALYNFITLSTPVGSLIFSGLIASSIYDSEAEKQAHNHISQLQSSSSFWFTRLYADGPHKCEGAICFFLTCMIMAGFCAIAGMLSLILVYRTRGVYYNLYGKSRTSTLS 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 15445097 15448081 + ClCG11G009480.1 Cla11g00909 284731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00909 596 MobiDBLite consensus disorder prediction 278 297 - -
Cla11g00909 596 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 3 592 - -
Cla11g00909 596 CDD MFS_Mch1p_like 15 568 - -
Cla11g00909 596 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Cla11g00909 596 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 592 - -
Cla11g00909 596 Gene3D MFS general substrate transporter like domains 364 581 IPR036259 -
Cla11g00909 596 SUPERFAMILY MFS general substrate transporter 212 581 IPR036259 -
Cla11g00909 596 SUPERFAMILY MFS general substrate transporter 10 202 IPR036259 -
Cla11g00909 596 Coils Coil 316 336 - -
Cla11g00909 596 Pfam Nodulin-like 15 262 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g01172 Cla-Chr7:28730378 Cla11g00909 Cla-Chr11:15445097 2.04E-108 dispersed
Cla11g00909 Cla-Chr11:15445097 Cla08g00796 Cla-Chr8:20364090 1.97E-96 dispersed
Cla11g00909 Cla-Chr11:15445097 Cla02g01155 Cla-Chr2:24894424 2.24E-101 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00909 - - csv:101211655 1105.89