Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00911 ATGGGATTATTTTTTTGGAGGGGTTTAGTTTTGGCGGTGGTTGTAGTGACGGCGACGGTGGAGAGAAGGGAGGCGCAATTAGTAGAAAATTTTTATGCCTCAAGTTGCCCAAACCTAGAGCAAATAGTTACACAATCTGTTCAATCCAAGTTTGCTCAAACCTTCGTTACCATTCCTGCAACTTTGCGACTCTTCTTCCATGACTGCTTTGTTGAGTCAGCAATAGCCAACTTATTTAGTAAAGTAGCTAAACAATTTGACTTGGAGGTAACCCAAGGATGTGATGGTTCAGTGATGATAGCATCTCCGAATGGGGATGCAGAGAAAGACGCTAAAGACAATGTTTCATTAGCAGGAGATGGATTTGACACGGTTGTTAAAGCAAAACAAGCAGTTGAAAATGTTTGTCCCGGTGTTGTCTCATGTGCTGACATCTTGGCTCTTGCAACTAGAGACGTGGTTAAGTTGGCTGGAGGTCCACAATACAGCGTAGAACTCGGACGTCGAGATGGGCTAATTTCCCAAGCATCTCGAGTGTCTGGAAACCTACCAGAACCATTCTTCAATCTGGACCAACTCACCACCATGTTCGCCGCCCACAACCTTACCCTCATCGACATCATCGCCCTCTCCGGAGCTCACACCCTCGGCTTCTCCCATTGTGACCGTTTTGCCAACCGCCTTTACTCGTTTTCCCCTTCGTCTCCAGTGGACCCATCGTTAGACCCCGGCTACGCTCGACAGCTAATGGATGCTTGTCCGCAAAACGTGGATCCTAGTGTGGCCATCAACATGGACCCTATAACCCCTCAGACCTTTGACAACCTTTACTACCAGAATCTTGTTGCCGGCAAGGGGCTCTTCACGGCGGACCAGATTCTGTTTACTGAGTCAGAATCGCAGCCGACGGTTCTTAGCTTTTCCACCAATGGGGCGGAGTTTAATGCAGCATTTATTAGGGCCATGACTAAGTTGGGTCGGGTCGGGGTTAAGACGGGTAATAATGGTGAAATTCGAAGGGATTGCACTGCCTTTAATTCCTAA 1044 47.7 MGLFFWRGLVLAVVVVTATVERREAQLVENFYASSCPNLEQIVTQSVQSKFAQTFVTIPATLRLFFHDCFVESAIANLFSKVAKQFDLEVTQGCDGSVMIASPNGDAEKDAKDNVSLAGDGFDTVVKAKQAVENVCPGVVSCADILALATRDVVKLAGGPQYSVELGRRDGLISQASRVSGNLPEPFFNLDQLTTMFAAHNLTLIDIIALSGAHTLGFSHCDRFANRLYSFSPSSPVDPSLDPGYARQLMDACPQNVDPSVAINMDPITPQTFDNLYYQNLVAGKGLFTADQILFTESESQPTVLSFSTNGAEFNAAFIRAMTKLGRVGVKTGNNGEIRRDCTAFNS 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 15464735 15466503 - ClCG11G009500.2 Cla11g00911 284733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00911 347 PANTHER PEROXIDASE 91 347 - -
Cla11g00911 347 PANTHER - 91 347 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00911 347 ProSitePatterns Peroxidases proximal heme-ligand signature. 206 216 IPR019793 -
Cla11g00911 347 ProSiteProfiles Plant heme peroxidase family profile. 26 346 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00911 347 PANTHER - 10 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00911 347 SUPERFAMILY Heme-dependent peroxidases 26 346 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla11g00911 347 Gene3D Peroxidase, domain 2 184 325 - -
Cla11g00911 347 Pfam Peroxidase 45 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00911 347 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00911 347 PRINTS Haem peroxidase superfamily signature 206 221 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00911 347 PRINTS Haem peroxidase superfamily signature 266 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00911 347 PANTHER PEROXIDASE 10 78 - -
Cla11g00911 347 CDD secretory_peroxidase 26 345 IPR033905 GO:0004601|GO:0042744
Cla11g00911 347 PRINTS Plant peroxidase signature 320 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00911 347 PRINTS Plant peroxidase signature 120 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00911 347 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00911 347 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00911 347 PRINTS Plant peroxidase signature 139 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00911 347 PRINTS Plant peroxidase signature 158 173 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00911 347 PRINTS Plant peroxidase signature 280 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00911 347 PRINTS Plant peroxidase signature 264 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00911 347 PRINTS Plant peroxidase signature 205 217 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00911 347 Gene3D - 30 346 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla10g01386 Cla-Chr10:28962334 Cla11g00911 Cla-Chr11:15464735 2.60E-80 dispersed
Cla11g00911 Cla-Chr11:15464735 Cla05g00838 Cla-Chr5:8305976 5.23E-80 dispersed
Cla11g00911 Cla-Chr11:15464735 Cla11g00913 Cla-Chr11:15495659 3.30E-145 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00911 K00430 - csv:101213580 561.607