Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00913 ATGGCCATGCGAGTGGTGCTGTCATTGACTCTTCTCTTCATTCTCATTGGGGTCGCCCAGGCCCAGCTCTCCCTCAACTTCTACAATTCAACGTGCCCAAATGTCGAACAAATCGTTCGCCAGGCCGTCACCCTAAAGTTTAATCAAACATTCGTTACTGTTCCCGCAACTCTAAGGCTCTTCTTCCATGACTGCTTTGTTCAGGGATGTGATGCTTCGGTTATGATAGCATCCGCAAGTGGTGATGCAGAAAAAGACGCCGAGGACAACTTGTCATTGGCAGGAGATGGATTTGATACCGTGGTTAAAGCTAAACAAGCAGTGGAAGCTCAATGTCCTGGAATAGTATCGTGTGCGGATGTATTAGCCATCGCTGCAAGGGACGTCGTGGTTTTGGCAAGAGGGCCAAATTTCGCTGTTGAATTAGGACGGCGAGATGGGCTAATCTCGAAAGCATCTTTAGTAGCCGGAAACTTACCGGGACCAAACTTCAACTTGAGCGAATTAAACGCAATGTTCGCCAAAAACAACCTAACCCAAACCGAAATGATTGCGTTATCAGGAGCTCACACGGTTGGGTTCTCACATTGCAACCGTTTTGCAAACCGTCTCTACAACTTCTCGGCCACTTCTAATGTGGACCCTTCTCTGGACTCGGACTACGCCCAGCAGCTCATAGACGCCTGCCCACAAAACGTGGATCCCAGAGTGGCTGTGGACATGGACACTATTACCCCAAGGAAAATGGATAATGTGTATTACCAAAATCTTGTGAACCACAAGGGGCTATTCACGTCGGATCAGGTGCTTTTTACGGACCCGTTGTCGCAACCGACGGTGAGTGGCTTTGCTAATGACAATCATGGGTTCAAGAAAGCGTTTGCGGCGGCTATGGTTCAGCTTGGGAGAGTGGGGGTTAAGACTGGGGTTTTGGGAGATGGGCAGCTGGTGGAAAATTTTTATAAATCCACTTGTCCAAACGTGGAACAAATAGTGAGACAGGCCGTTCAAAACAAGCTCTCCCAAACTACTATTACCATTCCCGCTACTCTCCGTCTCTTCTTCCATGATTGTTTTGTTGAGGGATGCGATGCTTCGATCATGATTTCATCGCCAAACGGAGACGCCGAGAAGGACGCTCAAGATAACCTTTCCCTTGCTGGAGATGGCTTTGACACCGTCGTCAAGGCAAAACAGGCCGTTGAAGCCGCCTGCCCCGGTCGAGTCTCTTGCGCTGACATTTTGGCTCTCGCTGCCCGAGATGCCGTCGTCCTCGCAGGAGGCCCAAATTTCAACGTCGAATTAGGACGTCGTGATGGCCTGATCTCCAAAGCCTCACGTGTCGACGGAAATTTACCATCCCCAAATTTCGACCTCAACACACTGACTTCCATGTTCGCCAGACATGGCCTCTCCCAAACCGACATGATCGCCCTCTCCGGCGCCCACACAATCGGCGCCTCCCACTGCAACCGCTTTTCCGATCGACTCTTCTCTGCTTCCGGTGTAGATCCATCGCTAAATCCTACCTACGCAGAGCAGTTGAAACAAGCGTGCCCTCGAAATGTGGATCCAAATGTGGTGGTGAAGCTGGATCCGACCACTCCAGACACTTTTGACAACGTGTATTACCGAAATCTAATGAACGGAAAAGGACTGTTTAGATCAGATGAGGTTCTGTTCACGAGCTCAGCGTCGAAGGGGACGGTGGTGGGATTTGCGAACAACGGAGGGCAGTTCAATACGGCGTTTGTAGAGGCGATGAGGAAGCTTGGGAGAGTGGGAGTTAAGACGGGGAGAGCTGGAGAGATAAGGAGAGACTGTAGTGCCTTCAATTGA 1839 50.35 MAMRVVLSLTLLFILIGVAQAQLSLNFYNSTCPNVEQIVRQAVTLKFNQTFVTVPATLRLFFHDCFVQGCDASVMIASASGDAEKDAEDNLSLAGDGFDTVVKAKQAVEAQCPGIVSCADVLAIAARDVVVLARGPNFAVELGRRDGLISKASLVAGNLPGPNFNLSELNAMFAKNNLTQTEMIALSGAHTVGFSHCNRFANRLYNFSATSNVDPSLDSDYAQQLIDACPQNVDPRVAVDMDTITPRKMDNVYYQNLVNHKGLFTSDQVLFTDPLSQPTVSGFANDNHGFKKAFAAAMVQLGRVGVKTGVLGDGQLVENFYKSTCPNVEQIVRQAVQNKLSQTTITIPATLRLFFHDCFVEGCDASIMISSPNGDAEKDAQDNLSLAGDGFDTVVKAKQAVEAACPGRVSCADILALAARDAVVLAGGPNFNVELGRRDGLISKASRVDGNLPSPNFDLNTLTSMFARHGLSQTDMIALSGAHTIGASHCNRFSDRLFSASGVDPSLNPTYAEQLKQACPRNVDPNVVVKLDPTTPDTFDNVYYRNLMNGKGLFRSDEVLFTSSASKGTVVGFANNGGQFNTAFVEAMRKLGRVGVKTGRAGEIRRDCSAFN 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 15495659 15512905 - ClCG11G009520.1 Cla11g00913 284735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00913 612 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Cla11g00913 612 ProSitePatterns Peroxidases proximal heme-ligand signature. 475 485 IPR019793 -
Cla11g00913 612 Gene3D Peroxidase, domain 2 453 591 - -
Cla11g00913 612 PANTHER PEROXIDASE 312 612 - -
Cla11g00913 612 ProSiteProfiles Plant heme peroxidase family profile. 22 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00913 612 ProSiteProfiles Plant heme peroxidase family profile. 315 612 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00913 612 PRINTS Plant peroxidase signature 530 545 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00913 612 PRINTS Plant peroxidase signature 427 442 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00913 612 PRINTS Plant peroxidase signature 586 599 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00913 612 PRINTS Plant peroxidase signature 408 418 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00913 612 PRINTS Plant peroxidase signature 546 563 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00913 612 PRINTS Plant peroxidase signature 325 344 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00913 612 PRINTS Plant peroxidase signature 474 486 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00913 612 PRINTS Plant peroxidase signature 349 369 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00913 612 PRINTS Plant peroxidase signature 389 402 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00913 612 Gene3D - 26 312 - -
Cla11g00913 612 SUPERFAMILY Heme-dependent peroxidases 315 612 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla11g00913 612 PANTHER - 312 612 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00913 612 Gene3D - 319 612 - -
Cla11g00913 612 Pfam Peroxidase 45 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00913 612 Pfam Peroxidase 332 576 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00913 612 PRINTS Haem peroxidase superfamily signature 409 426 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00913 612 PRINTS Haem peroxidase superfamily signature 347 361 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00913 612 PRINTS Haem peroxidase superfamily signature 427 439 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00913 612 PRINTS Haem peroxidase superfamily signature 532 547 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00913 612 PRINTS Haem peroxidase superfamily signature 475 490 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cla11g00913 612 CDD secretory_peroxidase 315 611 IPR033905 GO:0004601|GO:0042744
Cla11g00913 612 Gene3D Peroxidase, domain 2 160 301 - -
Cla11g00913 612 SUPERFAMILY Heme-dependent peroxidases 22 313 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cla11g00913 612 PANTHER - 5 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cla11g00913 612 PANTHER PEROXIDASE 5 312 - -
Cla11g00913 612 CDD secretory_peroxidase 22 312 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01190 Cla-Chr2:25463472 Cla11g00913 Cla-Chr11:15495659 6.19E-133 dispersed
Cla05g01799 Cla-Chr5:29898887 Cla11g00913 Cla-Chr11:15495659 1.40E-127 dispersed
Cla06g00516 Cla-Chr6:6238791 Cla11g00913 Cla-Chr11:15495659 6.33E-73 dispersed
Cla06g01637 Cla-Chr6:29893824 Cla11g00913 Cla-Chr11:15495659 3.50E-82 dispersed
Cla09g00439 Cla-Chr9:4162682 Cla11g00913 Cla-Chr11:15495659 5.01E-130 dispersed
Cla09g00440 Cla-Chr9:4186114 Cla11g00913 Cla-Chr11:15495659 4.81E-53 dispersed
Cla09g01824 Cla-Chr9:35882966 Cla11g00913 Cla-Chr11:15495659 7.61E-86 dispersed
Cla11g00911 Cla-Chr11:15464735 Cla11g00913 Cla-Chr11:15495659 3.30E-145 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00913 K00430 - csv:101213343 541.576