Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cla11g00927 | TTTCCCGAAACTGGAGGGACAGATAAAGGGTTCCTCACGGATCGGTACTCTGAAACTGGTGGGCGTCGGGGTTTCAATCGGGCGGTTGGCCTGGAGTGCATTCTAAGCATTGTTAGGGCACTTCGGATGGGGTCCTGCTTGTCTTCGGAGAGCAGGAGCCCCATTCCTGGTTCCCCAACTTCTCCGGCTAAGCATCATCGGAGCAAGAACAGTTCCAAGAGGCGATATGGTTCTAGGAATTCCTCCTTTGGGGATCTCTCACTTCATCGGATCCCCGGCAGGCTCTTCGCTAATGGCTTCACTGATGTCGCGTCTCTGTTCACCCAGCAGGGCAAGAAAGGGACCAATCAGGATGCCATGATTGTTTGGGAGAATTTCGGCTCTAGAACTGATACGATCTTCTGTGGGGTTTTTGATGGCCATGGTCCCTATGGTCATATGGTTGCAAAGAAAGTGAGGGATTCTCTTCCTCTGAGGTTGAGTGCACATTGGGAGGTTAACTTGACCACGGATGATGTTCATAGAGAGATCAATCTTAATACAGGAAGTATGAACTCGGATGAAGCTACTTCCTTTTTATCTGCTGAAGAAGAGTCAAGGGCCTCCACTGATGTTGATGGAACGGAAAAGCAACCTGAAATTTTCCATACTCTGAAGGAGTCATTTCTTAAGGCTTTTAGAGTTATGGACTGGGAACTCAGAATGCACCAAACTATAGATAGCTTCTGTAGTGGGACTACAGCAGTGACTATTGTTAAACAGGGTCAGGATCTTGTCATTGGAAATGTTGGGGACTCCCGAGCTGTTTTGGGTATGAGAGATAAAGATGACTCGCTTGTTGCCATTCAATTGACTGTGGATCTCAAGCCAAATCTTCCAGCTGAAGCAGAGAGAATCCGTAGGTGTAGAGGTCGTGTCTTTGCTCTCCAAGATGAACCTGATGTAGCTCGAGTTTGGCTTCCAAACAGCAACTCTCCTGGACTTGCCATGGCTCGGGCATTTGGAGATTTCTGCCTCAAAGACTTTGGTCTTATCTCTGTACCAGAAATATCATATCGACGGCTCACTGAAAAAGACGAATTCATTGTTCTGGCTACAGATGGAATATGGGATGTTCTGTCAAACAAAGAGGTTGTAGATATTGTTGCATCAGCTCCAAAACGTACTATTGCAGCTCGAACTCTGGTCGAAACTGCCATTAAAGCATGGAAACATAAATACCCAACTTCCAAGATTGATGACTGTGCGGTCGTTTGCCTCTTCCTCGACTCAAACTCCAGCAATCTATCATCTGCTTCCAATACCAAACCGGAAGAGCAACAAAGTTTAACAGAACAAGTCAGCACTGCAGTTGAGAATGAAAATTTCTGTGTCCCAAATGGTCTGAATCGTTCAGGAACTGTCCGAACCACCAGCAAGGAGATTTTGCAGGATGGAAGTGATGAAGAAGAAGATGAATCGAAGGAGGAAGAACATTCAGAAATGGGAATAGAATGGTCTGCCCTGGAAGGAGTGTCGCGCGTAAACACTTTGGTAACCCTGCCAAGATTCGATCCTGGAAAAGAAGATAAGAAAGGGCAG | 1581 | 46.43 | FPETGGTDKGFLTDRYSETGGRRGFNRAVGLECILSIVRALRMGSCLSSESRSPIPGSPTSPAKHHRSKNSSKRRYGSRNSSFGDLSLHRIPGRLFANGFTDVASLFTQQGKKGTNQDAMIVWENFGSRTDTIFCGVFDGHGPYGHMVAKKVRDSLPLRLSAHWEVNLTTDDVHREINLNTGSMNSDEATSFLSAEEESRASTDVDGTEKQPEIFHTLKESFLKAFRVMDWELRMHQTIDSFCSGTTAVTIVKQGQDLVIGNVGDSRAVLGMRDKDDSLVAIQLTVDLKPNLPAEAERIRRCRGRVFALQDEPDVARVWLPNSNSPGLAMARAFGDFCLKDFGLISVPEISYRRLTEKDEFIVLATDGIWDVLSNKEVVDIVASAPKRTIAARTLVETAIKAWKHKYPTSKIDDCAVVCLFLDSNSSNLSSASNTKPEEQQSLTEQVSTAVENENFCVPNGLNRSGTVRTTSKEILQDGSDEEEDESKEEEHSEMGIEWSALEGVSRVNTLVTLPRFDPGKEDKKGQ | 527 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 16035128 | 16038176 | - | ClCG11G009750.1 | Cla11g00927 | 284749 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cla11g00927 | 527 | ProSiteProfiles | PPM-type phosphatase domain profile. | 103 | 422 | IPR001932 | - | |
| Cla11g00927 | 527 | PANTHER | ALPHABET, ISOFORM E-RELATED | 43 | 512 | - | - | |
| Cla11g00927 | 527 | PANTHER | PROTEIN PHOSPHATASE 2C 33-RELATED | 43 | 512 | - | - | |
| Cla11g00927 | 527 | MobiDBLite | consensus disorder prediction | 48 | 81 | - | - | |
| Cla11g00927 | 527 | MobiDBLite | consensus disorder prediction | 188 | 208 | - | - | |
| Cla11g00927 | 527 | Pfam | Protein phosphatase 2C | 215 | 401 | IPR001932 | - | |
| Cla11g00927 | 527 | MobiDBLite | consensus disorder prediction | 428 | 448 | - | - | |
| Cla11g00927 | 527 | CDD | PP2Cc | 103 | 422 | IPR001932 | - | |
| Cla11g00927 | 527 | MobiDBLite | consensus disorder prediction | 460 | 500 | - | - | |
| Cla11g00927 | 527 | Gene3D | - | 101 | 424 | IPR036457 | - | |
| Cla11g00927 | 527 | MobiDBLite | consensus disorder prediction | 460 | 474 | - | - | |
| Cla11g00927 | 527 | SUPERFAMILY | PP2C-like | 103 | 423 | IPR036457 | - | |
| Cla11g00927 | 527 | SMART | PP2C_4 | 94 | 420 | IPR001932 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cla02g01501 | Cla-Chr2:29542599 | Cla11g00927 | Cla-Chr11:16035128 | 2.43E-117 | dispersed | |
| Cla02g01709 | Cla-Chr2:31950483 | Cla11g00927 | Cla-Chr11:16035128 | 1.92E-141 | dispersed | |
| Cla03g01012 | Cla-Chr3:19168090 | Cla11g00927 | Cla-Chr11:16035128 | 2.30E-171 | dispersed | |
| Cla03g01683 | Cla-Chr3:32699425 | Cla11g00927 | Cla-Chr11:16035128 | 4.31E-109 | dispersed | |
| Cla04g00673 | Cla-Chr4:21449765 | Cla11g00927 | Cla-Chr11:16035128 | 6.14E-116 | dispersed | |
| Cla05g01817 | Cla-Chr5:30126378 | Cla11g00927 | Cla-Chr11:16035128 | 2.95E-90 | dispersed | |
| Cla06g00457 | Cla-Chr6:5563819 | Cla11g00927 | Cla-Chr11:16035128 | 2.36E-80 | dispersed | |
| Cla08g00451 | Cla-Chr8:13746133 | Cla11g00927 | Cla-Chr11:16035128 | 1.90E-176 | dispersed | |
| Cla10g00340 | Cla-Chr10:4469979 | Cla11g00927 | Cla-Chr11:16035128 | 1.05E-123 | dispersed | |
| Cla11g00927 | Cla-Chr11:16035128 | Cla02g00118 | Cla-Chr2:1360519 | 7.34E-145 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cla11g00927 | - | - | csv:101222150 | 867.455 |