Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g00927 TTTCCCGAAACTGGAGGGACAGATAAAGGGTTCCTCACGGATCGGTACTCTGAAACTGGTGGGCGTCGGGGTTTCAATCGGGCGGTTGGCCTGGAGTGCATTCTAAGCATTGTTAGGGCACTTCGGATGGGGTCCTGCTTGTCTTCGGAGAGCAGGAGCCCCATTCCTGGTTCCCCAACTTCTCCGGCTAAGCATCATCGGAGCAAGAACAGTTCCAAGAGGCGATATGGTTCTAGGAATTCCTCCTTTGGGGATCTCTCACTTCATCGGATCCCCGGCAGGCTCTTCGCTAATGGCTTCACTGATGTCGCGTCTCTGTTCACCCAGCAGGGCAAGAAAGGGACCAATCAGGATGCCATGATTGTTTGGGAGAATTTCGGCTCTAGAACTGATACGATCTTCTGTGGGGTTTTTGATGGCCATGGTCCCTATGGTCATATGGTTGCAAAGAAAGTGAGGGATTCTCTTCCTCTGAGGTTGAGTGCACATTGGGAGGTTAACTTGACCACGGATGATGTTCATAGAGAGATCAATCTTAATACAGGAAGTATGAACTCGGATGAAGCTACTTCCTTTTTATCTGCTGAAGAAGAGTCAAGGGCCTCCACTGATGTTGATGGAACGGAAAAGCAACCTGAAATTTTCCATACTCTGAAGGAGTCATTTCTTAAGGCTTTTAGAGTTATGGACTGGGAACTCAGAATGCACCAAACTATAGATAGCTTCTGTAGTGGGACTACAGCAGTGACTATTGTTAAACAGGGTCAGGATCTTGTCATTGGAAATGTTGGGGACTCCCGAGCTGTTTTGGGTATGAGAGATAAAGATGACTCGCTTGTTGCCATTCAATTGACTGTGGATCTCAAGCCAAATCTTCCAGCTGAAGCAGAGAGAATCCGTAGGTGTAGAGGTCGTGTCTTTGCTCTCCAAGATGAACCTGATGTAGCTCGAGTTTGGCTTCCAAACAGCAACTCTCCTGGACTTGCCATGGCTCGGGCATTTGGAGATTTCTGCCTCAAAGACTTTGGTCTTATCTCTGTACCAGAAATATCATATCGACGGCTCACTGAAAAAGACGAATTCATTGTTCTGGCTACAGATGGAATATGGGATGTTCTGTCAAACAAAGAGGTTGTAGATATTGTTGCATCAGCTCCAAAACGTACTATTGCAGCTCGAACTCTGGTCGAAACTGCCATTAAAGCATGGAAACATAAATACCCAACTTCCAAGATTGATGACTGTGCGGTCGTTTGCCTCTTCCTCGACTCAAACTCCAGCAATCTATCATCTGCTTCCAATACCAAACCGGAAGAGCAACAAAGTTTAACAGAACAAGTCAGCACTGCAGTTGAGAATGAAAATTTCTGTGTCCCAAATGGTCTGAATCGTTCAGGAACTGTCCGAACCACCAGCAAGGAGATTTTGCAGGATGGAAGTGATGAAGAAGAAGATGAATCGAAGGAGGAAGAACATTCAGAAATGGGAATAGAATGGTCTGCCCTGGAAGGAGTGTCGCGCGTAAACACTTTGGTAACCCTGCCAAGATTCGATCCTGGAAAAGAAGATAAGAAAGGGCAG 1581 46.43 FPETGGTDKGFLTDRYSETGGRRGFNRAVGLECILSIVRALRMGSCLSSESRSPIPGSPTSPAKHHRSKNSSKRRYGSRNSSFGDLSLHRIPGRLFANGFTDVASLFTQQGKKGTNQDAMIVWENFGSRTDTIFCGVFDGHGPYGHMVAKKVRDSLPLRLSAHWEVNLTTDDVHREINLNTGSMNSDEATSFLSAEEESRASTDVDGTEKQPEIFHTLKESFLKAFRVMDWELRMHQTIDSFCSGTTAVTIVKQGQDLVIGNVGDSRAVLGMRDKDDSLVAIQLTVDLKPNLPAEAERIRRCRGRVFALQDEPDVARVWLPNSNSPGLAMARAFGDFCLKDFGLISVPEISYRRLTEKDEFIVLATDGIWDVLSNKEVVDIVASAPKRTIAARTLVETAIKAWKHKYPTSKIDDCAVVCLFLDSNSSNLSSASNTKPEEQQSLTEQVSTAVENENFCVPNGLNRSGTVRTTSKEILQDGSDEEEDESKEEEHSEMGIEWSALEGVSRVNTLVTLPRFDPGKEDKKGQ 527
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 16035128 16038176 - ClCG11G009750.1 Cla11g00927 284749
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cla11g00927 527 ProSiteProfiles PPM-type phosphatase domain profile. 103 422 IPR001932 -
Cla11g00927 527 PANTHER ALPHABET, ISOFORM E-RELATED 43 512 - -
Cla11g00927 527 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 43 512 - -
Cla11g00927 527 MobiDBLite consensus disorder prediction 48 81 - -
Cla11g00927 527 MobiDBLite consensus disorder prediction 188 208 - -
Cla11g00927 527 Pfam Protein phosphatase 2C 215 401 IPR001932 -
Cla11g00927 527 MobiDBLite consensus disorder prediction 428 448 - -
Cla11g00927 527 CDD PP2Cc 103 422 IPR001932 -
Cla11g00927 527 MobiDBLite consensus disorder prediction 460 500 - -
Cla11g00927 527 Gene3D - 101 424 IPR036457 -
Cla11g00927 527 MobiDBLite consensus disorder prediction 460 474 - -
Cla11g00927 527 SUPERFAMILY PP2C-like 103 423 IPR036457 -
Cla11g00927 527 SMART PP2C_4 94 420 IPR001932 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01501 Cla-Chr2:29542599 Cla11g00927 Cla-Chr11:16035128 2.43E-117 dispersed
Cla02g01709 Cla-Chr2:31950483 Cla11g00927 Cla-Chr11:16035128 1.92E-141 dispersed
Cla03g01012 Cla-Chr3:19168090 Cla11g00927 Cla-Chr11:16035128 2.30E-171 dispersed
Cla03g01683 Cla-Chr3:32699425 Cla11g00927 Cla-Chr11:16035128 4.31E-109 dispersed
Cla04g00673 Cla-Chr4:21449765 Cla11g00927 Cla-Chr11:16035128 6.14E-116 dispersed
Cla05g01817 Cla-Chr5:30126378 Cla11g00927 Cla-Chr11:16035128 2.95E-90 dispersed
Cla06g00457 Cla-Chr6:5563819 Cla11g00927 Cla-Chr11:16035128 2.36E-80 dispersed
Cla08g00451 Cla-Chr8:13746133 Cla11g00927 Cla-Chr11:16035128 1.90E-176 dispersed
Cla10g00340 Cla-Chr10:4469979 Cla11g00927 Cla-Chr11:16035128 1.05E-123 dispersed
Cla11g00927 Cla-Chr11:16035128 Cla02g00118 Cla-Chr2:1360519 7.34E-145 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g00927 - - csv:101222150 867.455