Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla11g01089 | ATGTTGGAGGGTGGTCAAAAATTCACTGGAATGATCGATTTAAACGAGCATGCATATGATCTATCGCAAGGGTTTTACCATAAACTTGGTGAGGGAACCAACATGTCTATTGACAGCTTTGCAAGCTTGCAAACGAGCAATGATGGAGGGTCAGTTGCCATGTCTTTAGATAACAGCAGTGTAGGATCAAATGAGTCTCATACTCGGATCTTAAATCACCAAGGCTTGCGACGGCGTGCAAATGACAACCATACTTTTCAACATAGTGTTAACCGCCGCGGAAGAGTTACACATCACCTGAGTGATGATGCACTAGCCCGAGCTTTATTTGATAGTAATACACCCACCCAGGGTCTTGAAAATTTTGAGAAGTGGACACTTGATTTAAGGAAGCTTAATATGGGGGAGGCTTTTGCTCAAGGTGCCTTTGGGAAACTCTACAGAGGTACTTATGATGGTGAAGATGTTGCTATCAAGATCTTGGAGAGGCCAGAGAATGACCTGGAAAAGGCTCAGTTAATGGAGCAGCAATATCAGCAGGAGGTGATGATGCTTGCTACACTGAAGCACCCAAATATTGTCCGGTTTATTGGATCATGCCATAAGCCGATGGTTTGGTGCATTGTTACTGAGTATGCGAAGGGCGGTTCAGTTAGGCAGTTCTTGATGAAGCGACAAAGTCGTTCTGTCCCACTGAAATTAGCTGTCAAACAAGCTTTGGATGTTGCCAGGGGGATGGAATATGTTCATGGCCTTGGGTTGATTCATAGGGACTTGAAATCGGACAACCTTTTGATTTTTGCAGACAAGTCTATCAAAGTTGCTGACTTTGGAGTGGCCCGGATTGAGGTGCAGACAGAAGGAATGACACCTGAGACTGGAACCTACCGCTGGATGGCTCCATTTGCATTTTTGTCACTCGTTGCTGGTTGGCATGTTGCTTCTCAGGGGAAAGTTGCTGATCATATTTTGGAGATGATCCAACACAGGCCTTACACCCAAAAGGTGGACCTCTATAGCTTTGGTATCGTTCTGTGGGAGCTCATAACTGGAATGCTTCCATTCCAGAATATGACAGCTGTTCAGGCCGCCTTTGCAGTCGTAAACAAAGGCGTCCGTCCTATCATTCCCAATGATTGCTTACCTGTATTGAGCGACATCATGACCCGGTGCTGGGATGCCAACCCTGATGTTAGGCCGTCATTTACCGAGGTGGTCCGAATGCTTGAGAATGCGCAGACTGAGATCATGACGACAGTTCGTAAGGCTCGTTTCAGGTGTTGCATTACGCAGCCGATGACAACAGACTGA | 1311 | 46.15 | MLEGGQKFTGMIDLNEHAYDLSQGFYHKLGEGTNMSIDSFASLQTSNDGGSVAMSLDNSSVGSNESHTRILNHQGLRRRANDNHTFQHSVNRRGRVTHHLSDDALARALFDSNTPTQGLENFEKWTLDLRKLNMGEAFAQGAFGKLYRGTYDGEDVAIKILERPENDLEKAQLMEQQYQQEVMMLATLKHPNIVRFIGSCHKPMVWCIVTEYAKGGSVRQFLMKRQSRSVPLKLAVKQALDVARGMEYVHGLGLIHRDLKSDNLLIFADKSIKVADFGVARIEVQTEGMTPETGTYRWMAPFAFLSLVAGWHVASQGKVADHILEMIQHRPYTQKVDLYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKGVRPIIPNDCLPVLSDIMTRCWDANPDVRPSFTEVVRMLENAQTEIMTTVRKARFRCCITQPMTTD | 436 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 22239628 | 22248833 | + | ClCG11G011180.1 | Cla11g01089 | 284911 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla11g01089 | 436 | Pfam | Protein tyrosine and serine/threonine kinase | 324 | 409 | IPR001245 | GO:0004672|GO:0006468 | |
Cla11g01089 | 436 | Pfam | Protein tyrosine and serine/threonine kinase | 133 | 301 | IPR001245 | GO:0004672|GO:0006468 | |
Cla11g01089 | 436 | SMART | serkin_6 | 132 | 417 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla11g01089 | 436 | ProSiteProfiles | Protein kinase domain profile. | 132 | 416 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cla11g01089 | 436 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 254 | 266 | IPR008271 | GO:0004672|GO:0006468 | |
Cla11g01089 | 436 | SUPERFAMILY | Protein kinase-like (PK-like) | 117 | 409 | IPR011009 | - | |
Cla11g01089 | 436 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 324 | 427 | - | - | |
Cla11g01089 | 436 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 2 | 301 | - | - | |
Cla11g01089 | 436 | CDD | STKc_MAP3K-like | 139 | 409 | - | - | |
Cla11g01089 | 436 | PANTHER | SERINE/THREONINE-PROTEIN KINASE HT1-LIKE | 2 | 301 | - | - | |
Cla11g01089 | 436 | Gene3D | Phosphorylase Kinase; domain 1 | 121 | 214 | - | - | |
Cla11g01089 | 436 | PANTHER | SERINE/THREONINE-PROTEIN KINASE HT1-LIKE | 324 | 427 | - | - | |
Cla11g01089 | 436 | Gene3D | Transferase(Phosphotransferase) domain 1 | 215 | 428 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g02251 | Cla-Chr1:36458051 | Cla11g01089 | Cla-Chr11:22239628 | 7.75E-88 | dispersed | |
Cla03g00768 | Cla-Chr3:9323890 | Cla11g01089 | Cla-Chr11:22239628 | 2.32E-83 | dispersed | |
Cla06g01701 | Cla-Chr6:30598998 | Cla11g01089 | Cla-Chr11:22239628 | 1.62E-62 | dispersed | |
Cla10g01357 | Cla-Chr10:28613891 | Cla11g01089 | Cla-Chr11:22239628 | 2.02E-68 | dispersed | |
Cla10g02141 | Cla-Chr10:37063622 | Cla11g01089 | Cla-Chr11:22239628 | 2.37E-61 | dispersed | |
Cla11g01089 | Cla-Chr11:22239628 | Cla01g01294 | Cla-Chr1:26249281 | 1.78E-90 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
80941 | PF07714 | PK_Tyr_Ser-Thr | 6.40E-37 | CL0016 | Cla | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla11g01089 | - | - | csv:101213713 | 818.92 |