Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g01104 ATGGCAAAAGGAGGAGCTCAGAAGAAAGATGTGGCGGTGGCGATCGACAAAGACAAATGTAGTCAACAAGCTTTGAAATGGACAATCGAACGCCTTCTTAGCAGAGGCCAAGTGGTTACTCTGCTTCATGTTAAGCAGAAACCGTCTTCCTCTGCACATTCGATGACGAATATGAGTGCGGATTCGGATGTGGATGAGGCCGCTTTGTATAAACAACAGCTTGATAGTCATGCCAGAGATCAGTTCTTCCTCCCTTTTCGTTGCATTTGCACAAGAAACAATATACCATGCAATGAGGTGATGTTGGATGAAGGAGAGATTCCAAAGACATTAATAAATTATGTCTCCAAAAATGTTATAGACATTTTAGTACTTGGTGCCCCTACAAGATCAATTTACAAGAGATTCAAGTCAGATGTTCCAAGCAGTGTATCAAAAGGAGCACCAGACTTCTGCACTGTTTACACTATTGGCAACAAAGGCAAGGTTTCAGTGAGACAATCCACAGCTCCACCGCCAGCAAAGCCTGTTGCTCCGCCGCGCACCCAACTGCAGCCCGCCCCACCCCGCCCTCAGCTGCTACATCAGCTCACCAATGCCTCGGAAGTTGCGGCCGAGCCGAACCAGCCACGCTCCCAAGCAGCTAAATCTTTAGATACTCAAAACAGCATAAATACTCCTCCTCGTGCCGTTCAAGAAGATTGGGACATCAAATCACCATTTACAAGGCCTGGTTCAAGGGCTTCAATGAGCAAAGTGATGGAACCATTGACGGCGGATTCCGACATATCGTATGTCAGCAGCGGGAGGCGGAGCATGGACCGTGGCTTCCAAGGGGCATGGAACTCCAGCACTTGCACCGACTCGTATCGCCTTTCTAACGTCTCTGAGTTTGAAGTTTCCAGCCCCAGTCCGGCTTCGCCTATGCTGGAAATGGGAGGAGGAACCAACAAATCATCCATTGATAATACTATCAATGATGATGATAATAATAACAACAACAATAGCAATGTCTCTTCTTACCCTCAAGATATGTCATTTTGCTCTTTACAAAGTGAAACATTCTCTTGGCCTTCCAATTCTCACGCTCAGGATGATGTTGAAGCTGAGATGAGAAGACTGAAATTAGAGCTCAAACAAACCATGGACATGTACAGTACGGCCTGCAAAGAAGCCCTAAACGCCAAGCAGAAGGCGATGGAGCTCCATCGCTGGAAAGTGGAAGAAGAGCAAAGGTTAGAAGAGGCGAGAATGGGGGGGGAAGCAGCATTAGCAATGGCGGAGAAGGAGAAGATGAAATGCAAAGCAGCGATGGAGGCAGCTGAAGCTGCACAAAAGATCGCAGTACTTGAGGCGAGGAAAAGAGCGAACGCGGAGAAAATGGTGGACATGGAAGCACAAGAAACGAAAAGAACACTTTCGCTTTCAGGATTCGGCCATGGAGAAATCGGTTACAGAAGGTACACAATCCAGGAAATCGAAACTGCCACGAAAGGCTTTTCTGATTCTCTAAAGATCGGTGAAGGCGGTTACGGTCCAGTCTTCCGTGGAGAACTTGACCACACACCGGTGGCAATCAAGGTTCTCCGGCCGGATGCTGCTCACGGACGATCACAATTTCAGCAAGAGGTTGAAGTTCTAAGTTGTATTCGTCATCCAAACATGGTTCTCCTTCTTGGAGCGTGTCCTGAAAACGGTTGTTTAGTTTACGAATTCATGGCGAATGGAAGCTTAGAAGACTGTCTCTTTCGAAAAGCGAATGATCCAATTCTTTCATGGCAGTTACGATTCCGAATCGCGGCGGAGATCGCTACCGGACTTCTCTTCCTACACCAGGCCAGACCAGAACCGATTGTACACCGCGATCTGAAACCGGGGAACATTTTGCTAGATAGGAACTACGTGAGCAAAATCAGTGACGTCGGACTGGCGAGGCTGGTTCCTCCATCAGTGGCCGATTCAGTGACTCAATATCGGATGACAGCAACGGCAGGGACATTCTTCTACATCGATCCAGAGTATCAGCAAACAGGATTGCTAGGGATTAAATCGGACATTTACTCGTTGGGCGTGATGCTTCTGCAAATAATCACAGCCAGGCCCCCAATCGGACTGGCGCACGCTGTCGAAAGGGCGATTGAGAAGGGGACATTTGCAGAGATGCTTGATCCAGATGTGAAGGACTGGCCGGTTGAAGACGCGTTGAAGTTTGCGAAACTTTCAATTAAGTGCGCAGAAATGAGGAAGAGAGATCGACCAGATCTTGGGAAGGTGGTGCTGCCGGAGCTTAATCGGTTGAGAACAATGGCGGAGGAGAGTATGGGACTTCGGTCGTTCAACGGTGGTAGTACGTGTTCATCGCCATATGCAAGCCAAACTTCTCAGGAAATGATAAGTAGTGTAAATCTGGAGCATTGTGGAGCATGGGTTGAGAGCTCAAGCAGCCAATCAGATAGCAGCATGTCATCATACTCAGGCAAAATACCTTATTGGCTGGACTAG 2502 47.96 MAKGGAQKKDVAVAIDKDKCSQQALKWTIERLLSRGQVVTLLHVKQKPSSSAHSMTNMSADSDVDEAALYKQQLDSHARDQFFLPFRCICTRNNIPCNEVMLDEGEIPKTLINYVSKNVIDILVLGAPTRSIYKRFKSDVPSSVSKGAPDFCTVYTIGNKGKVSVRQSTAPPPAKPVAPPRTQLQPAPPRPQLLHQLTNASEVAAEPNQPRSQAAKSLDTQNSINTPPRAVQEDWDIKSPFTRPGSRASMSKVMEPLTADSDISYVSSGRRSMDRGFQGAWNSSTCTDSYRLSNVSEFEVSSPSPASPMLEMGGGTNKSSIDNTINDDDNNNNNNSNVSSYPQDMSFCSLQSETFSWPSNSHAQDDVEAEMRRLKLELKQTMDMYSTACKEALNAKQKAMELHRWKVEEEQRLEEARMGGEAALAMAEKEKMKCKAAMEAAEAAQKIAVLEARKRANAEKMVDMEAQETKRTLSLSGFGHGEIGYRRYTIQEIETATKGFSDSLKIGEGGYGPVFRGELDHTPVAIKVLRPDAAHGRSQFQQEVEVLSCIRHPNMVLLLGACPENGCLVYEFMANGSLEDCLFRKANDPILSWQLRFRIAAEIATGLLFLHQARPEPIVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADSVTQYRMTATAGTFFYIDPEYQQTGLLGIKSDIYSLGVMLLQIITARPPIGLAHAVERAIEKGTFAEMLDPDVKDWPVEDALKFAKLSIKCAEMRKRDRPDLGKVVLPELNRLRTMAEESMGLRSFNGGSTCSSPYASQTSQEMISSVNLEHCGAWVESSSSQSDSSMSSYSGKIPYWLD 833
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 22448886 22456068 + ClCG11G011330.1 Cla11g01104 284926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g01104 833 MobiDBLite consensus disorder prediction 192 229 - -
Cla11g01104 833 MobiDBLite consensus disorder prediction 172 187 - -
Cla11g01104 833 Coils Coil 364 384 - -
Cla11g01104 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Cla11g01104 833 SMART serkin_6 500 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01104 833 Pfam Universal stress protein family 10 145 IPR006016 -
Cla11g01104 833 Gene3D Phosphorylase Kinase; domain 1 482 572 - -
Cla11g01104 833 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 137 - -
Cla11g01104 833 Gene3D HUPs 9 157 IPR014729 -
Cla11g01104 833 CDD STK_N 11 161 - -
Cla11g01104 833 ProSiteProfiles Protein kinase domain profile. 500 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01104 833 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 35-LIKE 6 798 - -
Cla11g01104 833 Gene3D Transferase(Phosphotransferase) domain 1 573 778 - -
Cla11g01104 833 PANTHER OS02G0152300 PROTEIN 6 798 - -
Cla11g01104 833 MobiDBLite consensus disorder prediction 300 342 - -
Cla11g01104 833 SUPERFAMILY Protein kinase-like (PK-like) 479 759 IPR011009 -
Cla11g01104 833 Pfam Protein kinase domain 503 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01104 833 Coils Coil 424 444 - -
Cla11g01104 833 MobiDBLite consensus disorder prediction 163 232 - -
Cla11g01104 833 MobiDBLite consensus disorder prediction 313 342 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla08g01256 Cla-Chr8:25473806 Cla11g01104 Cla-Chr11:22448886 0 dispersed
Cla11g00152 Cla-Chr11:1806239 Cla11g01104 Cla-Chr11:22448886 1.02E-10 dispersed
Cla11g01104 Cla-Chr11:22448886 Cla05g00164 Cla-Chr5:1511538 4.72E-86 dispersed
Cla11g01104 Cla-Chr11:22448886 Cla09g00073 Cla-Chr9:688045 2.35E-19 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80943 PF00069 Pkinase 5.30E-37 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g01104 - - csv:101203771 1268.45