Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g01128 ATGCCATCGCTTAAGGGCTCTCCGTACGCTAGACGGAGTGATGTGGAGTCCGGTAGCAGCAATTCCGGCGACGCGGAGGAGGAGGATTTATCTAATCCTTTTGAAATTCACACCACTAAGCATGCTTCTGTTGACAGACTCCGCCGCTGGAGACAAGCTGCGCTAGTGTTAAATGCTTCTCGTCGTTTTCGGTATACTTTAGACTTGAAAAAGGAAGAAGAGAAGAAAGAAGCTTTGAGAAAGATTAGAGCACATGCACAAGCCATACGAGCTGCGTATCTCTTTAAAGAGGCTGGGGATCGTGTAACAGGACCAGGGCCTGCAGCAGCAGAAGCTCCAAATGGTGATTTTTCAGTTGGACCAGAGCAACTGGCTGTGTTGGTTAAGGATCGTAATGTTGAAGCTCTGGAGCAGTATGGAGGGGTTAAAGGGGTAGCAGATATGTTACAATCAAATTTAGAGAAGGGGATAATTGGTGATGATTCTGATTTATTGAAACGGAGAAACACATATGGTTCAAACACATATCCCCAGAAACCGGGAAGGAGTTTTTGGAGGTTTCTCTGGGAAGCTTGGCAAGATCTTACATTGATCATATTGATGATAGCTGCTGTTGCTTCGTTGGTGCTAGGCATAAAGACTGAGGTGAGATTTCGTTTCATTTTTCATGTCTTAGGAATCAAGGAAGGCTGGTATGATGGTGGAAGCATTGCTTTTGCAGTTATTCTTGTCATTGTCGTAACAGGTGTTATACATTGGTTGCTTTTTATTGTTTTCATTTACATTGTGTTTCGTGCTTATGGTTATGGTATTCTGTGTTCTTTCAGATTCACTTACGTTGTTTTAGTTATTTCAGTGAGGGCTATTAGTGACTATCGACAATCTCTTCAATTTCAGAACTTGAATAAGGAGAAGAGGAACATACAAGTGGAGGTCGTTAGGGGTGGCCGTCGAATTGAGGTCTCAATTTATGACATCGTTGTTGGTGATGTTATACCGCTCAATATTGGTGATCAGGTCCCTGCTGATGGCATCCTAATTTCTGGACACTCACTTGCTATTGATGAATCAAGCATGACTGGAGAGAGCAAGATTGTTCAAAAGCATGGTAAGGAACCATTCCTGATGTCTGGATGCAAAGTAGCTGATGGTAGTGGCACCATGCTGGTAAATGTTTATTTATTTTTGGGGTTTTCTCCCTTCCAGTCCTTCAGGATTGCAATTAGTCCAATGTTATTTTTAGGTTTGTGTGTTACAAGTGTTGGAGTTAATACTGAATGGGGTTTGCTTATGGCAAGTATTTCTGAAGACAACGGCGAGGAAACTCCTTTGCAGGTGCGTTTAAATGGTGTGGCAACTTTAATTGGTATTGTTGGACTCACAGTAGCTTTTGCTGTCTTGATTGTGCTCCTTACAAGGTATTTCACTGGTCACACCAAAAATCCAGATGGAAGCCGTCAGTTTATTCCAGGCCAGACAAAAGTTGGTCGTGCCGTTGACGGGGCCATCAAAATTGTCACTATTGCGGTGACCATTGTTGTGGTTGCTGTGCCAGAAGGGCTTCCACTAGCTGTAACCTTAACTCTTGCTTACTCAATGAGAAAGATGATGGCAGACAAGGCATTGGTGCGGAGGCTATCAGCATGTGAGACGATGGGGTCTGCTACAACTATTTGTAGTGATAAGACTGGAACCTTAACTTTAAATCAGATGACCATTGTTGAGGCTTATGCTGGTGGAAAGAAGATTGATCCGCCAGAGAAGAAGTCAGAGTTGTCTCCTATGTTACACTCTACACTTATTGAAGGCATTGCTCTAAACTCAAATGGCAGTGTATATATGCCTGAGATCCTTGAGTTTTTTGTGTTAATATTTACAAAATGGATTCAAATTTACAATCCAGTTTTGTCATCATCAAATATGTATAATTTGTCTTGCTACCTGTTTGAAACCCTAATGTGTCTTGTAATTTTCAGAGTGGTGGAGAGGTGGAGAATTGAATTTTACTATACAGTATTCATATTCATCATGTGGCTACAGCTGGGAATGAACTTTGAAGCACTTCGATCAGAATCTGCAATTCTTCACGTCTTCCCCTTCAGCTCAGATAAAAAACGTGGTGGTGTTGCAGGTCAACGGGATGATCAAGTCCGTGTACACTGGAAAGGTGCTGCTGAGATAGTCTTAGCATCGTGCACACAGATGAATGGTTTTGTGAAACGTTGGCACAAAACAGGAAATATGAAGTATTTTAAAAGGGCTATCGAAGATATGGCTTCACGTAGTTTACGTTGTGTTGCAATTGCATATAGACCTGTTGAACCTGAGAATGTTCCTGATGGCGAAGAACAATTGAGTAAGTGGGCTCTACCAGAAGACGACCTTGTGTTGTTGGCTATAGTTGGTTTGAAGGTAAGTCTTTGTTCTTTCAAGCGATACTTCATTTTCAATTATAAGAACAAATGTTCTGCAGATTGGTGCCATGACCCCTGCCGACCAGGAGTGAAAGATGCAGTACGACTTTGCCAAAAGGCTGGTGTTAAGGTGCGCATGGTCACTGGTGATAATGTTCAAACTGCTAGAGCTATTGCATTGGAATGTGGAATACTTGGTTCAGATTCAGATGCTACTGAACCAAATCTTATTGAAGGAAAAGTATTCCGTGCCCTATCTGATGCCCAAAGAGAAGAAGTTGCTGAGAAAATATCAGTGATGGGCCGATCCTCCCCCAATGATAAGCTTCTCCTTGTGCAAGCGTTGAGAAAGAAAGGACATGTAGTTGCTGTTACTGGAGATGGTACAAATGATGCTCCTGCATTGCATGAGGCAGATATTGGCCTTGCAATGGGAATTCAGGGGACAGAAGTTGCCAAAGAAAGCTCCGATATTATTATTTTAGATGACAACTTTGCTTCTGTTGTGAAGACTAGAGTTGTAAGGTGGGGCCGATCAGTATATGCAAATATTCAGAAATTCATTCAGTTTCAGCTTACTGTTAATGTTGCAGCACTCATTATAAATGTCGTGGCAGCAGTATCCTCTGGTGATGTCCCACTAAATGCTGTGCAGCTTTTGTGGGTTAATCTTATCATGGACACTCTCGGAGCATTAGCTTTGGCTACTGAACCACCAACCAATCACCTTATGGACAGATCGCCAGTTGGTAGAAGCTGGTTATCTTGTATTGTGCATCTCTTTTCATTGTGGTATCTAGCATTTTGGACCTTTTTAGAACCTCTCATAACAAATATTATGTGGAGGAACCTCCTGATACAGGTAATATCTTGTGGCTTGATTTCTGTTTTTTCAAAATTTCCATTTTCGAAGGCTCTAGCACTTTACAAAATTCCCTACTCCATGGTGTATCTTCAGGCATTTTATCAAGTCACTGTGTTGCTCGTCCTCAATTTTCGTGGTCGGAGTTTGCTTCATTTGAACCACTCTAATTTAGAAGCTATCAAAGTGAAGAATACATTGATTTTCAATGCATTTGTACTTTGTCAAATTTTCAATGAGTTTAATGCTCGAAAACCTGATGAGAAGAATATATTCAAAGGAGTCACTAAAAATTATCTCTTCATCGGGATCATTGCAATTACTGTCATCCTCCAGGTGAGACCTGTGATAATAATCGAGTTTCTTGGGAAATTCACATCCACGGTAAGGCTAAATTGGAAATATTGGATTATTTCCATAATCATTGGCGTTATCAGTTGGCCTCTTGCTCTTCTTGGGAAATTCATACCTGTTCCTGAAACTCCCTTCCATGTGCTCATTATCAGAATGTTCCGTAAACGACAACCTGGGGGAGGTTAA 3816 41.48 MPSLKGSPYARRSDVESGSSNSGDAEEEDLSNPFEIHTTKHASVDRLRRWRQAALVLNASRRFRYTLDLKKEEEKKEALRKIRAHAQAIRAAYLFKEAGDRVTGPGPAAAEAPNGDFSVGPEQLAVLVKDRNVEALEQYGGVKGVADMLQSNLEKGIIGDDSDLLKRRNTYGSNTYPQKPGRSFWRFLWEAWQDLTLIILMIAAVASLVLGIKTEVRFRFIFHVLGIKEGWYDGGSIAFAVILVIVVTGVIHWLLFIVFIYIVFRAYGYGILCSFRFTYVVLVISVRAISDYRQSLQFQNLNKEKRNIQVEVVRGGRRIEVSIYDIVVGDVIPLNIGDQVPADGILISGHSLAIDESSMTGESKIVQKHGKEPFLMSGCKVADGSGTMLVNVYLFLGFSPFQSFRIAISPMLFLGLCVTSVGVNTEWGLLMASISEDNGEETPLQVRLNGVATLIGIVGLTVAFAVLIVLLTRYFTGHTKNPDGSRQFIPGQTKVGRAVDGAIKIVTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTIVEAYAGGKKIDPPEKKSELSPMLHSTLIEGIALNSNGSVYMPEILEFFVLIFTKWIQIYNPVLSSSNMYNLSCYLFETLMCLVIFRVVERWRIEFYYTVFIFIMWLQLGMNFEALRSESAILHVFPFSSDKKRGGVAGQRDDQVRVHWKGAAEIVLASCTQMNGFVKRWHKTGNMKYFKRAIEDMASRSLRCVAIAYRPVEPENVPDGEEQLSKWALPEDDLVLLAIVGLKVSLCSFKRYFIFNYKNKCSADWCHDPCRPGVKDAVRLCQKAGVKVRMVTGDNVQTARAIALECGILGSDSDATEPNLIEGKVFRALSDAQREEVAEKISVMGRSSPNDKLLLVQALRKKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKTRVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTNHLMDRSPVGRSWLSCIVHLFSLWYLAFWTFLEPLITNIMWRNLLIQVISCGLISVFSKFPFSKALALYKIPYSMVYLQAFYQVTVLLVLNFRGRSLLHLNHSNLEAIKVKNTLIFNAFVLCQIFNEFNARKPDEKNIFKGVTKNYLFIGIIAITVILQVRPVIIIEFLGKFTSTVRLNWKYWIISIIIGVISWPLALLGKFIPVPETPFHVLIIRMFRKRQPGGG 1271
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 22983121 23011577 - ClCG11G011560.2 Cla11g01128 284950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g01128 1271 Coils Coil 69 89 - -
Cla11g01128 1271 PRINTS P-type cation-transporting ATPase superfamily signature 355 369 - -
Cla11g01128 1271 PRINTS P-type cation-transporting ATPase superfamily signature 845 855 - -
Cla11g01128 1271 PRINTS P-type cation-transporting ATPase superfamily signature 954 966 - -
Cla11g01128 1271 PRINTS P-type cation-transporting ATPase superfamily signature 559 573 - -
Cla11g01128 1271 PRINTS P-type cation-transporting ATPase superfamily signature 930 949 - -
Cla11g01128 1271 MobiDBLite consensus disorder prediction 13 27 - -
Cla11g01128 1271 PANTHER CATION TRANSPORTING ATPASE 678 805 - -
Cla11g01128 1271 Gene3D - 831 975 IPR023214 -
Cla11g01128 1271 Gene3D - 309 392 - -
Cla11g01128 1271 PANTHER CATION TRANSPORTING ATPASE 1118 1260 - -
Cla11g01128 1271 SUPERFAMILY HAD-like 557 1037 IPR036412 -
Cla11g01128 1271 Pfam Cation transport ATPase (P-type) 681 734 - -
Cla11g01128 1271 Gene3D - 666 804 IPR023299 GO:0000166
Cla11g01128 1271 SFLD Haloacid Dehalogenase 541 983 - -
Cla11g01128 1271 MobiDBLite consensus disorder prediction 1 36 - -
Cla11g01128 1271 PANTHER CALCIUM-TRANSPORTING ATPASE 417 617 - -
Cla11g01128 1271 PANTHER CALCIUM-TRANSPORTING ATPASE 828 1095 - -
Cla11g01128 1271 PANTHER CALCIUM-TRANSPORTING ATPASE 1118 1260 - -
Cla11g01128 1271 PANTHER CALCIUM-TRANSPORTING ATPASE 678 805 - -
Cla11g01128 1271 PANTHER CALCIUM-TRANSPORTING ATPASE 20 251 - -
Cla11g01128 1271 Pfam E1-E2 ATPase 308 390 - -
Cla11g01128 1271 Pfam E1-E2 ATPase 418 537 - -
Cla11g01128 1271 SUPERFAMILY Calcium ATPase, transmembrane domain M 139 1090 IPR023298 -
Cla11g01128 1271 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 565 803 IPR023299 GO:0000166
Cla11g01128 1271 Pfam Cation transporting ATPase, C-terminus 1017 1248 IPR006068 -
Cla11g01128 1271 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 897 1012 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cla11g01128 1271 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 499 582 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cla11g01128 1271 SFLD p-type atpase 541 983 IPR044492 -
Cla11g01128 1271 Pfam Cation transporter/ATPase, N-terminus 139 207 IPR004014 -
Cla11g01128 1271 SMART Cation_ATPase_N_a_2 138 212 IPR004014 -
Cla11g01128 1271 Pfam haloacid dehalogenase-like hydrolase 822 944 - -
Cla11g01128 1271 PANTHER CATION TRANSPORTING ATPASE 280 390 - -
Cla11g01128 1271 PANTHER CATION TRANSPORTING ATPASE 417 617 - -
Cla11g01128 1271 PANTHER CATION TRANSPORTING ATPASE 828 1095 - -
Cla11g01128 1271 PANTHER CATION TRANSPORTING ATPASE 20 251 - -
Cla11g01128 1271 Gene3D - 976 1239 - -
Cla11g01128 1271 Gene3D - 398 584 - -
Cla11g01128 1271 Gene3D - 42 98 - -
Cla11g01128 1271 PANTHER CALCIUM-TRANSPORTING ATPASE 280 390 - -
Cla11g01128 1271 SUPERFAMILY Calcium ATPase, transmembrane domain M 1065 1250 IPR023298 -
Cla11g01128 1271 ProSitePatterns E1-E2 ATPases phosphorylation site. 561 567 IPR018303 -
Cla11g01128 1271 SUPERFAMILY Calcium ATPase, transduction domain A 308 391 IPR008250 -
Cla11g01128 1271 Pfam Ca2+-ATPase N terminal autoinhibitory domain 31 74 IPR024750 GO:0005516
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g01629 Cla-Chr2:31045708 Cla11g01128 Cla-Chr11:22983121 0 dispersed
Cla09g00143 Cla-Chr9:1449087 Cla11g01128 Cla-Chr11:22983121 0 dispersed
Cla10g01496 Cla-Chr10:30188099 Cla11g01128 Cla-Chr11:22983121 0 dispersed
Cla11g01128 Cla-Chr11:22983121 Cla09g00688 Cla-Chr9:6679601 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g01128 K01537 - csv:101211703 1739.55