Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla11g01141 | ATGGAGAACATTCTGGACGAGTATGGGTATTACTGGGAAACGAATATGTTTCTGCAGACGCAAGAGTTCGACAGTTGGGGATTGGATGAAGCATTTTACGGTTCTTACGATTCGAGCTCGCCCGACGGAACGCTGTCGTCGTTAGAGGCATCCAAGAACATCTTATCGGAGAGGAATCGGAGGAAGAAGCTCAACGATAGGCTTCTTGCTCTCAGAGCTGTGGTCCCTAATATCACCAAGATGGACAAGGCGTCGATAATAAAAGACGCGATCGAGTACATCCAAGAGCTGCGAGCGCAAGAAAAGAGAATCGAATCGGAGATTTCAGATCTGGAAGGCAAAATCGAGAACAGAACAACAAATGAAGAAGACGACGACCATAATGGCAGTGGAAACTCCAGAAAGAGAACGAACGATTATAATCGACAAGTACGAGAGAAGCCATCCTCAATCCCGATCGAAATTCTCGATTTGAGCGTGAATTACATGGGAGAGAAGACGATGGTAGTGAGTTTGACGTGCGGAAGAAGAAGCGATGCGGTACTGAAAGTTAGTCAAGTAATTGAATCGCTGAAGCTTAAGATTATTACGGCCAATATCATCGTTGTTGCCAACAGAGTTATGAATACGCTCTTCCTTGAGGCAGAGAGAGCAGAGGAAGAGGAACTTAAGGTAAAAATAGAAAGAGCCATTGCAGCAATTAGTGATCAACAAAGCCCTACGAGCATTTGA | 732 | 44.95 | MENILDEYGYYWETNMFLQTQEFDSWGLDEAFYGSYDSSSPDGTLSSLEASKNILSERNRRKKLNDRLLALRAVVPNITKMDKASIIKDAIEYIQELRAQEKRIESEISDLEGKIENRTTNEEDDDHNGSGNSRKRTNDYNRQVREKPSSIPIEILDLSVNYMGEKTMVVSLTCGRRSDAVLKVSQVIESLKLKIITANIIVVANRVMNTLFLEAERAEEEELKVKIERAIAAISDQQSPTSI | 243 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 23611726 | 23620009 | - | ClCG11G011690.1 | Cla11g01141 | 284963 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla11g01141 | 243 | MobiDBLite | consensus disorder prediction | 110 | 143 | - | - | |
Cla11g01141 | 243 | Pfam | Helix-loop-helix DNA-binding domain | 55 | 97 | IPR011598 | GO:0046983 | |
Cla11g01141 | 243 | Gene3D | - | 47 | 114 | IPR036638 | GO:0046983 | |
Cla11g01141 | 243 | PANTHER | TRANSCRIPTION FACTOR BHLH35 | 1 | 237 | - | - | |
Cla11g01141 | 243 | MobiDBLite | consensus disorder prediction | 110 | 145 | - | - | |
Cla11g01141 | 243 | PANTHER | TRANSCRIPTION FACTOR SCREAM2-RELATED | 1 | 237 | - | - | |
Cla11g01141 | 243 | Coils | Coil | 213 | 233 | - | - | |
Cla11g01141 | 243 | Coils | Coil | 87 | 114 | - | - | |
Cla11g01141 | 243 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 53 | 114 | IPR036638 | GO:0046983 | |
Cla11g01141 | 243 | SMART | finulus | 54 | 103 | IPR011598 | GO:0046983 | |
Cla11g01141 | 243 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 48 | 97 | IPR011598 | GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla11g01141 | Cla-Chr11:23611726 | Cla03g00378 | Cla-Chr3:4383133 | 1.13E-17 | dispersed | |
Cla02g02106 | Cla-Chr2:36080981 | Cla11g01141 | Cla-Chr11:23611726 | 6.33E-21 | transposed | |
Cla11g01141 | Cla-Chr11:23611726 | Cla06g01360 | Cla-Chr6:27100692 | 4.38E-85 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62046 | PF00010 | HLH | 7.30E-11 | No_clan | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla11g01141 | - | - | csv:101203107 | 367.851 |