Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla11g01236 | ATGGGTTTTATTGAAGAATACTTGCCAGCAATGGCTATGTTTGGGCTTCAAGTGACTTATGCCATAATGGCTCTTATCTCCCGGGCTGCCCTTTTGAAGGGCATGAGTCCTAGAGTTTTTGTTGTTTATAGGCAAGCCATTGCCACTCTCTTTATTGCACCCATTGCTTATTTCTCCAGGTCGAAATCTAGGAGGGTGTCTTTGAACTTGAAGAGCTTTTCTCTAATCTTCCTTGCTTCTCTCGTCGGTGTGACGATGAACCAAAATGTTTACTTTGAGGGAGTTTTTTTAGTTAGCTCGTCAATGGCAACGGCAATGACTAATTTGATTCCTGCAGTGACGTTTGTTATAGCAACGATAGTCGGCATGGAGAATTTAAGGTTGGGAAGCTTGAGGAGCATCGCAAAGATTGGAGGGACAGTGGTTTGTGTGAGTGGGGCCATGTGTATGGCTCTTCTAAGGGGTCCAAAGCTTCTCAATACAACACAAGGTTTCGTGGTGAAATCTACATTATTTAGTGTGGAAAGTGGAAGTCACCGTGCTTGGTTATTGGGTTCCTTGTGTCTCTTTGGGAGTTGTTGTTGCTGGTCAATTTGGTTGATTTTGCAGGTACCAGCTTCAGCAAGCTATCCCGACAACTTATCTTTATCAGCATGGATGTGTTTCTTTGCCACAATTCAATCGATCATTGTTACTCTATTGGTAGAGCCAATCAATCTACAAACTTGGAAAATACATTCAACCATTGAACTTATTTGTTATCTCTTCTCAGGCATTGTTGGGTCAGGGGTTGCCTTCTTTGTTCAAGCTTGGTGTGTTTCAAAAAGAGGCCCCGTCTTCTCAGCAATGTTCAACCCTCTTTGCACCATTGTTACAACTATTTTGGCAGCTATGGTTCTTCACGAGGAAATTTTTACTGGAAGCTTGTTGGGGGGTGTGGCTGTAATTATTGGATTGTACATTGTTCTTTGGGGAAAAGCAAAAGATTATGTGAAGGAAGAAGGCAAAGAAAAGCAAAGTGTTGAAAAAGAAGAAGAGAATTGTGAATCAGCTGAGAGAATTAGCAATTGTCAAATTGATTTGGAGGAACCACTTTTGTCTAAAGAATCATGA | 1113 | 41.51 | MGFIEEYLPAMAMFGLQVTYAIMALISRAALLKGMSPRVFVVYRQAIATLFIAPIAYFSRSKSRRVSLNLKSFSLIFLASLVGVTMNQNVYFEGVFLVSSSMATAMTNLIPAVTFVIATIVGMENLRLGSLRSIAKIGGTVVCVSGAMCMALLRGPKLLNTTQGFVVKSTLFSVESGSHRAWLLGSLCLFGSCCCWSIWLILQVPASASYPDNLSLSAWMCFFATIQSIIVTLLVEPINLQTWKIHSTIELICYLFSGIVGSGVAFFVQAWCVSKRGPVFSAMFNPLCTIVTTILAAMVLHEEIFTGSLLGGVAVIIGLYIVLWGKAKDYVKEEGKEKQSVEKEEENCESAERISNCQIDLEEPLLSKES | 370 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 25829143 | 25834512 | - | ClCG11G012620.2 | Cla11g01236 | 285058 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla11g01236 | 370 | PANTHER | WAT1-RELATED PROTEIN | 10 | 346 | IPR030184 | GO:0016021|GO:0022857 | |
Cla11g01236 | 370 | PANTHER | WAT1-RELATED PROTEIN | 10 | 346 | - | - | |
Cla11g01236 | 370 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 43 | 152 | - | - | |
Cla11g01236 | 370 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 219 | 327 | - | - | |
Cla11g01236 | 370 | Pfam | EamA-like transporter family | 12 | 137 | IPR000620 | GO:0016020|GO:0016021 | |
Cla11g01236 | 370 | Pfam | EamA-like transporter family | 184 | 323 | IPR000620 | GO:0016020|GO:0016021 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla06g01441 | Cla11g01236 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla01g00401 | Cla-Chr1:4418395 | Cla11g01236 | Cla-Chr11:25829143 | 2.00E-27 | dispersed | |
Cla10g00247 | Cla-Chr10:2983799 | Cla11g01236 | Cla-Chr11:25829143 | 8.19E-23 | dispersed | |
Cla11g01236 | Cla-Chr11:25829143 | Cla11g01284 | Cla-Chr11:26371717 | 7.52E-71 | dispersed | |
Cla08g00712 | Cla-Chr8:19390302 | Cla11g01236 | Cla-Chr11:25829143 | 5.46E-77 | transposed | |
Cla11g01236 | Cla-Chr11:25829143 | Cla06g01276 | Cla-Chr6:26041062 | 5.20E-107 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla11g01236 | - | - | csv:101213601 | 642.499 |