Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g01330 ATGGAGGGAAGTCGACCCTTATCGACACTTGCAGAAAACAACAACTCCGCCATGGCTACTTGCATTCGAGATTTGGTAGAAGAAGAGGAACACATTTTCCGCAGCCAACTTCCTGAGGTCCAAGTGCCTGATAATATCACACTGCCGGAGTTTGTACTTCAGAATGCTGAATCATATGCTGAAAATGTGGCATTTGTGGAAGCCGTGAGTGGAAAGGCTTACACTTACCGCGAAGTTGTGAGAGACATAAATAGATTTTCCAAGGCCTTGTGCTCTCTGAGGTTAAAGAAGGGGCAGGTAGTTATTGTTGTTCTACCCAATGTTGCAGAATATGCCATTGTTGCTTTAGGGATAATGGCTGCTGGAGGTGTGTTTTCTGGTGTGAATCCAGCCGCTCATATATCAGAAATCAAAAAGCAGGTGGAGGTAGCAGAAGCCAAACTTGTCGTCACGAACAGCGCAAACTTTGAAAAGGTGAAGGAATTAAAGCTACCAGTGATCTTATTAGGGGAGGAACTAATTGAAGGTTCCATTAATTGGCACAAACTGCTTGAAGCTGCAGACCGTGCAGGCAACGATTGTGTTAAAGAAGATATTAAGCAGACTGATTTATGTGCCCTCCCTTTCTCATCAGGCACCACAGGGGTTTCCAAAGGCGTTATGCTAACTCACCGAAATCTAATAGCTAATTTGTGTTCGACTCTCTCCGGTGTCCCAAGAGAAATAGAGGGCAAGGTCACGACGTTAGGCCTCATTCCGTTCTTCCATATTTACGGGATCACTGGAATATGTTGTGCTGCACTTAGAAACAAGGGAAAAGTTGTGGTGATGGGAAGATTTGATCTCAGGACCTTCATTAATGCCCTCATAACACAGGAGGTCACATTTGCTCCAATTGTTCCTCCCATCATCCTGGCTTTGGTTAAGAATCCTATTGTCGAAGAATTTGATCTTAGCGGTCTCAAACTTCAGGCTATCATGACTGCAGCTGCTCCGCTCGCACCCGAAGTTCAGACTGCCTTCGAAAGAAAGTTCCCAGGCGTGGACATTCAAGAGTCAATAGATTGTGACAGATCTCTACTCTTGTTCATTCCTTCAAACTTTTTAGTTATGACATGTAGTACAACTTCCTGTTTTCGGCATATCAGAAGAAAACCGAGCTCCACCGCATATGGACTAACCGAGCATAGCTGCATCACTCTCAACTATGGAAGTATGGGCAAAGATAATCTCACTGCAAAGAAAAACACAGTTGGCCGCATTCTTCCTAATCTAGAAGTCAAATTCATCGATCCAGACAGCGGAAGGTCTCTGCCAAAGAACACTCCGGGTGAAATCTGTGTAAGAAGCCAGTGTGTGATGCAAGGTACGGAACGTTACTACAAAAATGAAGAGGAGACTTCAAGAACGATCGATAACAAAGGCTGGATGCACACTGGGGACATTGGATACATTGACGACGATGGCGACGTGTTTATTGTGGATCGTATTAAGGAATTGATCAAGTACAAAGGCTTTCAAGTTGCTCCAGCTGAGTTAGAGGCAATCCTCCTTGCTCATCCCTCCATTGAAGATGCAGCTGTGGTGCCGCTGCCAGACGAAGAAGCCGGTGAGATCCCAGCAGCAAGTGTCGTGATGGCTCCGAATTCAAAAGAAACTGAAGATGAAATAATCAAACATGTTGCCTCAAATGTTGCACATTACAAGAAAGTTAGGCTCGTTCATTTTGTGGACACTATCCCGAAGTCGCCTTCTGGGAAAGTTATGAGAAGGTTGATCAAAGAGAAGATGCTCGAAAAGATTCGAGCTGAATCCGCCTCTTAG 1824 44.79 MEGSRPLSTLAENNNSAMATCIRDLVEEEEHIFRSQLPEVQVPDNITLPEFVLQNAESYAENVAFVEAVSGKAYTYREVVRDINRFSKALCSLRLKKGQVVIVVLPNVAEYAIVALGIMAAGGVFSGVNPAAHISEIKKQVEVAEAKLVVTNSANFEKVKELKLPVILLGEELIEGSINWHKLLEAADRAGNDCVKEDIKQTDLCALPFSSGTTGVSKGVMLTHRNLIANLCSTLSGVPREIEGKVTTLGLIPFFHIYGITGICCAALRNKGKVVVMGRFDLRTFINALITQEVTFAPIVPPIILALVKNPIVEEFDLSGLKLQAIMTAAAPLAPEVQTAFERKFPGVDIQESIDCDRSLLLFIPSNFLVMTCSTTSCFRHIRRKPSSTAYGLTEHSCITLNYGSMGKDNLTAKKNTVGRILPNLEVKFIDPDSGRSLPKNTPGEICVRSQCVMQGTERYYKNEEETSRTIDNKGWMHTGDIGYIDDDGDVFIVDRIKELIKYKGFQVAPAELEAILLAHPSIEDAAVVPLPDEEAGEIPAASVVMAPNSKETEDEIIKHVASNVAHYKKVRLVHFVDTIPKSPSGKVMRRLIKEKMLEKIRAESAS 607
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 26773143 26776451 + ClCG11G013580.2 Cla11g01330 285152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g01330 607 Pfam AMP-binding enzyme C-terminal domain 512 587 IPR025110 -
Cla11g01330 607 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 388 600 - -
Cla11g01330 607 ProSitePatterns Putative AMP-binding domain signature. 207 218 IPR020845 -
Cla11g01330 607 SUPERFAMILY Acetyl-CoA synthetase-like 384 600 - -
Cla11g01330 607 CDD 4CL 42 591 - -
Cla11g01330 607 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 24 353 - -
Cla11g01330 607 Pfam AMP-binding enzyme 379 503 IPR000873 -
Cla11g01330 607 Pfam AMP-binding enzyme 54 347 IPR000873 -
Cla11g01330 607 PANTHER 4-COUMARATE--COA LIGASE-LIKE 1 24 353 - -
Cla11g01330 607 SUPERFAMILY Acetyl-CoA synthetase-like 34 351 - -
Cla11g01330 607 PANTHER 4-COUMARATE--COA LIGASE-LIKE 1 388 600 - -
Cla11g01330 607 Gene3D - 30 358 IPR042099 -
Cla11g01330 607 Gene3D - 366 498 IPR042099 -
Cla11g01330 607 Gene3D - 499 601 IPR045851 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla11g01229 Cla-Chr11:25623628 Cla11g01330 Cla-Chr11:26773143 1.14E-110 dispersed
Cla11g01330 Cla-Chr11:26773143 Cla10g01908 Cla-Chr10:34963679 1.01E-118 dispersed
Cla11g01330 Cla-Chr11:26773143 Cla09g00323 Cla-Chr9:3124225 8.25E-53 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g01330 K01904 - csv:101220731 968.378