Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g01337 ATGGCTTCCGCTTGTGCTTCTTCCGCCATTGCGGCTGTGGCAATCTCTTCATCCAGTTCCCAGAAGAATGGGTGCCCCAAGGCTTCTAATTTCCTTACCGGCAAGAAGCTGAGGCTGAGAAACTTAACTTCCGCGGCTGCTGTTGCTCCTCGATCAGCTCCGGTATGCGCCGCAGCTGACCCCGACAGACCTCTCTGGTTCCCTGGCAGCACCCCTCCTCCATGGCTCGACGGCAGCCTTCCCGGCGACTTTGGCTTTGACCCACTTGGTCTTGCGTCTGATCCGGAGAGTCTGAGATGGAACCAGCAGGCGGAGCTGGTACACTGCCGATGGGCAATGTTGGGGGCGGCCGGAATTTTCATCCCGGAATTTTTGACAAAGATCGGAATATTGAACACTCCGTCATGGTACACCGCCGGTGAATTGGAATACTTCACCGACACCACCACTCTGTTCATAGTGGAACTCATTTTCATTGGTTGGGCCGAAGGTAGACGGTGGGCCGACATCCTCAAACCCGGCTGCGTCAACACCGACCCGATTTTCCCTAACAACAAGCTCACCGGAACCGACGTCGGATACCCGGGTGGGCTTTGGTTCGACCCGCTCGGGTGGGGAAGCGGATCACCCGAAAAGATCAAGGAATTGAGAACGAAAGAGATAAAGAACGGGCGATTGGCTATGTTGGCGGTGATGGGAGCTTGGTTCCAACACATTTACACCGGCACCGGTCCCATTGACAACCTCTTCGCTCACCTTGCCGATCCCGGCCACGCCACCGTCTTCGCCGCTTTCACACCAAAGTGA 807 56.26 MASACASSAIAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK 268
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 26824719 26828004 - ClCG11G013660.2 Cla11g01337 285159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g01337 268 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 268 IPR001344 GO:0009765|GO:0016020
Cla11g01337 268 SUPERFAMILY Chlorophyll a-b binding protein 59 266 - -
Cla11g01337 268 Pfam Chlorophyll A-B binding protein 72 238 IPR022796 -
Cla11g01337 268 Gene3D Chlorophyll a/b binding protein domain 73 258 - -
Cla11g01337 268 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 268 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla03g01434 Cla-Chr3:29922828 Cla11g01337 Cla-Chr11:26824719 2.35E-102 dispersed
Cla11g01337 Cla-Chr11:26824719 Cla06g01586 Cla-Chr6:29404223 2.88E-73 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g01337 K08908 - csv:101214055 518.079