Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g01341 ATGAAGCTCCTTATTCTGGCCACCCTCACCATCTCACTCCTCTTCCCTCTCAGCCTCCTCAATTTCCTCATCTTTTGCTCTCTCCTCGTCCTCTCTCTCAACTTCTGGCTCATCCCCGGTGGATTTGCGTGGCGTAACCACCACCGCTTTTCCGTCAACCTCCCTGGCCCCTCCGGTTGGCCGCTCCTTGGCACGCTCCCCCAAATGGGGGCGCTTGCTCACCAGAATCTTGCCGCCATTGCTCACTCCTTCAAAGCCACGCGCCTTATGTCCTTTAGTTTGGGTGCCACTCGAGCCATCATAAGCAGCCACCCTGACACGGCCAAGCAGATTCTCTGCGGGTCTGCTTTCTCCGACCGTCCGGTCAAGCAATCAGCTCGGCTCATGATGTTCGAGAGAGCCATTGGCTTTGCTCCAAATGGGGACTATTGGCGCAATCTTCGACGAATTGCCGCGAACCACATGTTTTCCCCACGGAGAATCTCCGATTTGGAGGGGCTCCGTAGGGAGGTGGCCGATGAAATGGTGGCAGCGGTGTCAGAAAATATGGCGGTGGATGGGGTGGTGAAGCTGAGAGAGGTGCTGCAGAAGCATTCTTTGAAGAACATAATAGAGAGTGTGTTTGGGAGTGGTTTGGAGATGGGGAGGAAGGAAGAGCTGAGTGATATGGTGAGAGAAGGATATGAATTGATAGCGATGTTCAATTGGGAAGATTATTTTCCGGTCAGCTTTTTGGATTTTGGTGGAGTGAAACGGAGGTGCAATGAATTGGCGGGCAGGGTTAATGTGGTAATTGGCCAGATTGTTGAAGAGAGAAAAAGAGAAAATAATAAGTTTAATAATGATTTTCTTACTACTTTGCTAACTTTGCCAAAGGAGGATCAGTTGAGCGATTCAGATACGGTGGCTGTTTTATGGGAAATGATATTTCGTGGAACCGACACTATAGCAATACTTCTAGAATGGATAATGGCCAGGATGATATTACACCCAGATATCCAAGCCAAAGCTCAAAAGGAGATTGACACGTGCGTAGGGTGTAATAGGCACGTGCGTGATTCCGACATTCCGAACCTTCCTTACCTCCAGGCAATAGTTAAAGAAGTGCTTCGCCTACACCCACCAGGGCCATTACTTTCGTGGGCCCGTTTGGCAATCCACGATGTCCACGTGGACAAGATCTTAATCCCAGCTGGCACAACGGCAATGGTGAACATGTGGGCCATAGCCCACGACCCTTCCATATGGAAAGACCCCTGGACATTTAAGCCGGAACGGTTCATTGAAAACGACATGTCGATTATGGGATCGGACTTGAGATTGGCACCGTTCGGAGCTGGGCGAAGGGCGTGCCCAGGAAGGGCCTTGGGTTTAGCCACTGTGCACCTATGGCTAGCCACTTTTCTGCAACGGTTCAGATGGGTTCCATGTTCTACAAAGTCGGTTAGTTTATCGGAGTGTTTGAAGCTATCCCTTGAAATGAAGAAGCCTCTGAATTGTCGTGTGGTTAGTCGATGA 1518 50.2 MKLLILATLTISLLFPLSLLNFLIFCSLLVLSLNFWLIPGGFAWRNHHRFSVNLPGPSGWPLLGTLPQMGALAHQNLAAIAHSFKATRLMSFSLGATRAIISSHPDTAKQILCGSAFSDRPVKQSARLMMFERAIGFAPNGDYWRNLRRIAANHMFSPRRISDLEGLRREVADEMVAAVSENMAVDGVVKLREVLQKHSLKNIIESVFGSGLEMGRKEELSDMVREGYELIAMFNWEDYFPVSFLDFGGVKRRCNELAGRVNVVIGQIVEERKRENNKFNNDFLTTLLTLPKEDQLSDSDTVAVLWEMIFRGTDTIAILLEWIMARMILHPDIQAKAQKEIDTCVGCNRHVRDSDIPNLPYLQAIVKEVLRLHPPGPLLSWARLAIHDVHVDKILIPAGTTAMVNMWAIAHDPSIWKDPWTFKPERFIENDMSIMGSDLRLAPFGAGRRACPGRALGLATVHLWLATFLQRFRWVPCSTKSVSLSECLKLSLEMKKPLNCRVVSR 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 26865856 26869378 - ClCG11G013700.1 Cla11g01341 285163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g01341 505 Pfam Cytochrome P450 55 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01341 505 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01341 505 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01341 505 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01341 505 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01341 505 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01341 505 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01341 505 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01341 505 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01341 505 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01341 505 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01341 505 PANTHER CYTOCHROME P450 78A7-RELATED 7 505 - -
Cla11g01341 505 Gene3D Cytochrome P450 44 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01341 505 SUPERFAMILY Cytochrome P450 55 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cla11g01341 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Cla11g01341 505 PANTHER CYTOCHROME P450 FAMILY PROTEIN, EXPRESSED 7 505 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla08g01050 Cla-Chr8:23178388 Cla11g01341 Cla-Chr11:26865856 0 dispersed
Cla11g01341 Cla-Chr11:26865856 Cla01g01874 Cla-Chr1:33548993 8.11E-75 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g01341 - - csv:101212611 918.687