Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g01344 ATGAAAAACATGATTTTTAAGTCTCTGCTATATAATACCCCACTCACGCTCTATTCCAAGCATCCAAGTACCTTTGTTGCAGTTCAGCTAATGGCGGACAATTACCCCTTGAAAAACATCCTTCAGAGCACCGCTCTTCTCCAGTATATACTCGAAGCCAACGCCTATCCGAGAGAGCATGAACAGTTGAAGGAACTCAGGGAATCAACCATTAAGAAATTTGAAATCGCGAGTATGATGAATGTACCGGTAGATGAAGGATTATTTCTATTAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTGTATTCACTGGCTATTCCCTCCTCACCACTGCGCTTGCACTGCCCTCCGATGGCCAGATAACAGCAATTGATGTTGATAGAGAATCATTCGAGTTTGGTTTGCCATTTATAAGAAAGGCGGGAGTTGATCATAAGATCAATTTTGTAGAATCTCAGGCATTGGTTGCCCTAAATGACCTCCTCAATGATGGTAAAGAAGGAGAGTTTGATTTTGCATTTGTTGATGCCAATAAATCAGAGTACATTAAATATCATGAGTTCCTTCTAAAACTCGTGAAGATAGGTGGAGTAATTGTCTATGATAACACTCTATGGTTCGGATCAGTGGCGCTAAGTGATGACGCCGTCCATGAAAATTTGAAGGAGAACAAAAGTTATTTGCAACGATTCAATGCTTTTCTAGTCAATGACACACGGGTCATGGCGAACCATCAGCACGAGAAGAACATCCTCCGGAGCACCGCTCTTCTCCAGTATATATTGGAAGCCAATTCCTATCCGAGAGAGCATGAACAGTTGAAGGAACTCAGAGAAGCCACCTTCGAGAAGTTTGACAAACACCTGAGTGTGATGAATGTACCGGCGGACGAAGGATTATTTCTATCAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTGTATTCACCGGCTATTCCCTCCTCACTACGGCGCTTGCACTGCCTGCCGATGGCCAGATAACAGCAATTGATGTTGATAGAGAATCATTCGAGTTTGGTTTGCCATTTATCAAAAAGGCGGGAGTTGATCATAAGATCAATTTTGTAGAATGCCAAGGATTGGGCAAAGAAGGAGAGTATGACTTTGCATTTGTGGATGCAAACAAAGCAGAGTATATTAAATATCATGAGTTACTCTTAAAATTGGTAAAGGTAGGTGGAGTAATTGCTTATGACAACACCCTGTGGTTTGGATCGGTCGCATTGAGCGATGACGTCGTCCTTGAAAATTTGAAGGAGGGTAGAAGTCGTACACGAGAACTCAATGCTTTTCTAGTTAACGACTCACCGGTAGAGATAGCTCTTCTCTCCGTTGGAGATGGCTTCACTCTCTGTCGACAATCACGCTGGAGCTTGGTTTTAAGTCTCTGCTTACTTTATAATTTTCAACTCACGCTTTGTTCCAAGCATCCAAACACCTTCGTTGCATTTCAGCTAATGGCCGACGATTCCCCCAAGAAGAACATCCTTCAGAGCACCGCTCTTCTCCAGTATATACTGGAAGCCAACGCCTATCCAAGAGAGCATGAACAGTTGAAGGAACTCAGGGAATCCACCTTCGAGAAATTCGATAAGTCCATGAGTTTGATGAATGTACCAGCGGATGAAGGATTGTTTCTATCAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTGTATTCACTGGCTATTCCCTCCTCACCACTGCGCTTGCACTGCCCGCCGATGGCCAGATAACGGCAATTGATGTGAATAGACAATCGTTCGAATTTGGTTTGCCATTTATAACAAAAGCGGGAGTTGATCATAAGATCAATTTTGTGGAATCTCAGGCATTGGTTGCCTTGAATGACCTCCTCAATGATGGCAAAGAAGAAGATTTTGATTTTGCATTTGTTGATGCCAAAAAATCGGAGTATATTAAATATCATGAGTTGCTTCTAAAACTAGTGAAGGTAGGTGGAGTAATTGTCTATGATAACACTCTATGGTTTGGATCAGTGGCGCTAAGCGATGACGTCGTCCATGAAAAGTTGAAGGAGAACAAACATCATATACAACAATTCAATGCTTTCCTAGTAAATGACATGCGGGTGGAGATAGCTCTCCTCACCATTGGAGATGGTGTCACTCTTTGTAGACTTCAAGCAATGGCCGACGATTCCCCCGAGAAGAACATCCTCCAGAGCACCGCTCTTCTCCAGGAACTCGGGGAATCCACCTTCGAGAAATTTGACAAGTCCATGAGTGTGATGAATGTACCGGTGGATGAAGGATTATTTCTATCAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTATAACAGCAATTGATGTGGATAGACAACCATTCGAATTTGGTTTGCCATTTATAAGAAAGGCGGGAGTTGATCATAAGATTAATTTTGTGGAATCCCAAGCATTAGTTGCCCTCAATGACTTCCTCAATGATAGCAAAGAAGAAGAATTTGATTTTGCATTTGTTGATGCCAAAAAATCGGAGTACATCAAATATCACGAGTTGCTTCAAATATCACGAGTTGCTTCTAAAATTGGTGAAGGTGGCATAATTGCCTATGATAACACTTTGTGGTTTGGATCAGTGGCACTAAACGATGACGATGTCCATGAAGATTTGAAGGAGAACAAAAGTCATATACAACGACTCAATGCTTTTCTAGTAAATGACATGCGGGTAGAGATAGTTCTCCTCTCCATTGGAGACGGCGTCACTCTTTGCAGACTATGTCAAGATTTCAACATAGATAAATTTTATGAAGAAGAATATGAT 2865 41.47 MKNMIFKSLLYNTPLTLYSKHPSTFVAVQLMADNYPLKNILQSTALLQYILEANAYPREHEQLKELRESTIKKFEIASMMNVPVDEGLFLLMLLKLMNAKKTIEIGVFTGYSLLTTALALPSDGQITAIDVDRESFEFGLPFIRKAGVDHKINFVESQALVALNDLLNDGKEGEFDFAFVDANKSEYIKYHEFLLKLVKIGGVIVYDNTLWFGSVALSDDAVHENLKENKSYLQRFNAFLVNDTRVMANHQHEKNILRSTALLQYILEANSYPREHEQLKELREATFEKFDKHLSVMNVPADEGLFLSMLLKLMNAKKTIEIGVFTGYSLLTTALALPADGQITAIDVDRESFEFGLPFIKKAGVDHKINFVECQGLGKEGEYDFAFVDANKAEYIKYHELLLKLVKVGGVIAYDNTLWFGSVALSDDVVLENLKEGRSRTRELNAFLVNDSPVEIALLSVGDGFTLCRQSRWSLVLSLCLLYNFQLTLCSKHPNTFVAFQLMADDSPKKNILQSTALLQYILEANAYPREHEQLKELRESTFEKFDKSMSLMNVPADEGLFLSMLLKLMNAKKTIEIGVFTGYSLLTTALALPADGQITAIDVNRQSFEFGLPFITKAGVDHKINFVESQALVALNDLLNDGKEEDFDFAFVDAKKSEYIKYHELLLKLVKVGGVIVYDNTLWFGSVALSDDVVHEKLKENKHHIQQFNAFLVNDMRVEIALLTIGDGVTLCRLQAMADDSPEKNILQSTALLQELGESTFEKFDKSMSVMNVPVDEGLFLSMLLKLMNAKKTIEIGITAIDVDRQPFEFGLPFIRKAGVDHKINFVESQALVALNDFLNDSKEEEFDFAFVDAKKSEYIKYHELLQISRVASKIGEGGIIAYDNTLWFGSVALNDDDVHEDLKENKSHIQRLNAFLVNDMRVEIVLLSIGDGVTLCRLCQDFNIDKFYEEEYD 955
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 26893080 26925270 - ClCG11G013730.1 Cla11g01344 285166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g01344 955 Gene3D Vaccinia Virus protein VP39 30 248 IPR029063 -
Cla11g01344 955 Gene3D Vaccinia Virus protein VP39 249 470 IPR029063 -
Cla11g01344 955 Gene3D Vaccinia Virus protein VP39 738 940 IPR029063 -
Cla11g01344 955 Gene3D Vaccinia Virus protein VP39 501 735 IPR029063 -
Cla11g01344 955 PANTHER FLAVONOID 3',5'-METHYLTRANSFERASE-LIKE 252 470 - -
Cla11g01344 955 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 518 735 IPR029063 -
Cla11g01344 955 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 39 266 IPR002935 GO:0008171
Cla11g01344 955 PANTHER FLAVONOID 3',5'-METHYLTRANSFERASE-LIKE 507 734 - -
Cla11g01344 955 PANTHER O-METHYLTRANSFERASE-RELATED 252 470 - -
Cla11g01344 955 PANTHER O-METHYLTRANSFERASE-RELATED 35 246 - -
Cla11g01344 955 PANTHER O-METHYLTRANSFERASE-RELATED 753 939 - -
Cla11g01344 955 PANTHER O-METHYLTRANSFERASE-RELATED 507 734 - -
Cla11g01344 955 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 765 939 IPR029063 -
Cla11g01344 955 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 511 736 IPR002935 GO:0008171
Cla11g01344 955 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 46 246 IPR029063 -
Cla11g01344 955 PANTHER FLAVONOID 3',5'-METHYLTRANSFERASE-LIKE 35 246 - -
Cla11g01344 955 PANTHER FLAVONOID 3',5'-METHYLTRANSFERASE-LIKE 753 939 - -
Cla11g01344 955 CDD AdoMet_MTases 320 414 - -
Cla11g01344 955 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 257 471 IPR002935 GO:0008171
Cla11g01344 955 Pfam O-methyltransferase 55 247 IPR002935 GO:0008171
Cla11g01344 955 Pfam O-methyltransferase 272 470 IPR002935 GO:0008171
Cla11g01344 955 Pfam O-methyltransferase 527 734 IPR002935 GO:0008171
Cla11g01344 955 Pfam O-methyltransferase 799 939 IPR002935 GO:0008171
Cla11g01344 955 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 799 941 IPR002935 GO:0008171
Cla11g01344 955 CDD AdoMet_MTases 103 206 - -
Cla11g01344 955 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 262 470 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla02g00600 Cla-Chr2:6555306 Cla11g01344 Cla-Chr11:26893080 2.13E-40 dispersed
Cla05g01085 Cla-Chr5:11235426 Cla11g01344 Cla-Chr11:26893080 5.75E-11 dispersed
Cla07g01004 Cla-Chr7:26396788 Cla11g01344 Cla-Chr11:26893080 9.10E-18 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g01344 K00588 K13272 csv:101212121 373.244