Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g01352 GGCAAAACAACGGTGGTGGTGGTGATGGACAAAAATCTGTTGTTTCTAGTCTTGATTTTTCACTTTCAGGTTGCGTTTAGGGTTTTAGCCCTCTCGCCGGATGGTCTCTCGCTTCTCTCTCTGAAGTCGGCGATTGACCAGTCGCCGGATTCCTCTGTTTTCTCCGATTGGAACGAGGATGACTCCACGCCTTGCCGATGGTCTGGCATTTCTTGCATGAACGTTTCCGGTGACTCGCGAGTCGTTGGAATTGCTCTCTCTGGTAAGAATCTCCATGGCTACATTCCTTCTGAACTCGGCTCGCTTGTCTATCTCCGGCGATTGAACCTCCATAACAATAATCTCTACGGCTCGATACCTGAACAGTTGTTTAATGCTACCTCATTACATAGCCTATTTCTCTACAGTAATAATCTCTCCGGTCCTTTTCCCCCTTCGATCTGCAACATTCCGAGGCTTCAAAACCTCGATCTCTCCAACAATTCTCTCGCCGGACCACTACCCGACGAATTGAAGAATTGTAAACAATTGCAGCGATTAATACTCGCTAGAAATCAATTCGACGGAGAAATACCGTCTGGTGTTTGGTCTGGGATGGATAATTTACTTCAACTCGATCTCTCATCCAACGATTTCAGCGGATCGATTCCGGAGGATCTAGGGCAACTGAAGACACTTTCCGGTACGCTCAACCTCTCCTTCAATCATTTATCAGGTAAAATCCCGAAAACTCTCGGAGATTTGCCGGTAACGGTGAGTTTCGACCTCCGGAGCAACAATTTAAGCGGAAGCATACCTCAGACAGGTTCTTTCGCAAATCAAGGACCGACTGCATTTCTCAACAATCCCGAGTTATGTGGATTTCCTCTTCAAAAATCTTGTGAGAGTTCAGAACGTGGCTCACCGGGAAATCCGGATTCCAAGCCATCTTACATTTCCCCTAGAAAAGGATTGAGCGCCGGATTAATCATTCTCATCTCTGCCGCTGACGCCGCCGGAGTAGCATTTATCGGCTTGGTAATAGTATACATATATTGGCGACGGAAGGACAATTCGAACGGCTGTAGCTGTACGGCGAAAAGAAAATTCGGTGGGAATCAGAAAGACAATCTCTGCAATTTTCCTTGTATGAATGGACATGATAAGAATGAGGAGTCGGAAATGGAGGAACCGGAGAACAGTGAGAGAAGCAGAGAGGAAGGAGGGCTGGTGGCCGTAGACAAAGGCTTTACGTTCGAACTCGACGAGTTGCTGAGAGCGTCGGCGTATGTGCTGGGAAAGAGTGGACTGGGAATTGTGTACAAAGTGGTCCTCGGAAATGGGATTCCGGTGGCTGTACGGCGGTTGGGGGAAGGCGGAGAACAGAGGTATAAGGAGTTTGCGGCGGAGGTGCAGGCGATTGGAAGGGTAAAGCATCCTAATATTGTGAAACTGAGAGCTTATTATTGGGCGCCGGATGAGAAGCTTCTGATCAGTGATTTTATCTCCAATGGGAACTTGGCCTCTGCTCTTCGCGGGAAGAACGGGCAGGCATCTTCAATCCTTTCATGGGCAACAAGATTACGAGTAGCCAAGGGAACCGCCAGAGGATTAGCCTATCTACACGAATGCAGCCCAAGAAAATTCGTCCATGGCGACATCAAGCCCTCCAACATTCTCCTCGACAACGATTTCCATCCCCACATCTCCGACTTCGGCCTCAACCGCTTGATCAGCATCACCGGCAACAACCCCTCCTCCTCAGGCGGCCTCATCGGTGGCGCCTTCTCCTACCTCAAGTCCGTCCAAACCGACCGCACCAACAACTACTGCGCCCCGGAGGCCCGAGCCCCCGGCGGCCGGCCCACCCAAAAATGGGACGTCTATTCCTTCGGCGTCATGGTCCTCGAATTACTCACCGGAAAGTCGCCGGAGCTTTCCCCGAACACGTCGACTTCTTTGGAGATTCCGGATTTGGTGAGATGGGTTAGAAAAGGGTTTGAAGAAGCAAAGCCATTGTCGGAATTGGTGGACCCTGCTCTGTTACAAGAAGTACATGCTAAGAAAGAAGTGCTGGCCGTATTCCACTTGGCGCTCGCTTGTACAGAGAGCGACCCGGAAATTCGGCCCAGAATGAAGACGGTGTCGGAGAATTTCGAGAGGATTGGATCGTGA 2154 50.05 GKTTVVVVMDKNLLFLVLIFHFQVAFRVLALSPDGLSLLSLKSAIDQSPDSSVFSDWNEDDSTPCRWSGISCMNVSGDSRVVGIALSGKNLHGYIPSELGSLVYLRRLNLHNNNLYGSIPEQLFNATSLHSLFLYSNNLSGPFPPSICNIPRLQNLDLSNNSLAGPLPDELKNCKQLQRLILARNQFDGEIPSGVWSGMDNLLQLDLSSNDFSGSIPEDLGQLKTLSGTLNLSFNHLSGKIPKTLGDLPVTVSFDLRSNNLSGSIPQTGSFANQGPTAFLNNPELCGFPLQKSCESSERGSPGNPDSKPSYISPRKGLSAGLIILISAADAAGVAFIGLVIVYIYWRRKDNSNGCSCTAKRKFGGNQKDNLCNFPCMNGHDKNEESEMEEPENSERSREEGGLVAVDKGFTFELDELLRASAYVLGKSGLGIVYKVVLGNGIPVAVRRLGEGGEQRYKEFAAEVQAIGRVKHPNIVKLRAYYWAPDEKLLISDFISNGNLASALRGKNGQASSILSWATRLRVAKGTARGLAYLHECSPRKFVHGDIKPSNILLDNDFHPHISDFGLNRLISITGNNPSSSGGLIGGAFSYLKSVQTDRTNNYCAPEARAPGGRPTQKWDVYSFGVMVLELLTGKSPELSPNTSTSLEIPDLVRWVRKGFEEAKPLSELVDPALLQEVHAKKEVLAVFHLALACTESDPEIRPRMKTVSENFERIGS 717
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 26999967 27005017 - ClCG11G013800.1 Cla11g01352 285174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g01352 717 SUPERFAMILY L domain-like 36 291 - -
Cla11g01352 717 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Cla11g01352 717 Gene3D Ribonuclease Inhibitor 195 296 IPR032675 -
Cla11g01352 717 Gene3D Transferase(Phosphotransferase) domain 1 495 717 - -
Cla11g01352 717 SUPERFAMILY Protein kinase-like (PK-like) 424 710 IPR011009 -
Cla11g01352 717 Gene3D Phosphorylase Kinase; domain 1 411 494 - -
Cla11g01352 717 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 14 716 - -
Cla11g01352 717 SMART serkin_6 423 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01352 717 ProSiteProfiles Protein kinase domain profile. 419 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01352 717 Pfam Protein kinase domain 424 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01352 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 542 554 IPR008271 GO:0004672|GO:0006468
Cla11g01352 717 MobiDBLite consensus disorder prediction 293 312 - -
Cla11g01352 717 Gene3D Ribonuclease Inhibitor 33 194 IPR032675 -
Cla11g01352 717 CDD STKc_IRAK 425 715 - -
Cla11g01352 717 MobiDBLite consensus disorder prediction 294 308 - -
Cla11g01352 717 Pfam Leucine rich repeat 105 163 IPR001611 GO:0005515
Cla11g01352 717 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 716 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla01g00505 Cla-Chr1:5457902 Cla11g01352 Cla-Chr11:26999967 3.41E-69 dispersed
Cla04g00044 Cla-Chr4:1331851 Cla11g01352 Cla-Chr11:26999967 1.61E-170 dispersed
Cla05g01097 Cla-Chr5:11361460 Cla11g01352 Cla-Chr11:26999967 6.54E-128 dispersed
Cla11g00735 Cla-Chr11:10497198 Cla11g01352 Cla-Chr11:26999967 2.87E-141 dispersed
Cla11g01352 Cla-Chr11:26999967 Cla04g00636 Cla-Chr4:20744678 8.76E-91 dispersed
Cla11g01352 Cla-Chr11:26999967 Cla01g00577 Cla-Chr1:6507054 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80951 PF00069 Pkinase 7.10E-33 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g01352 - - csv:101220493 1338.55