Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla11g01380 | ATGGATAAGCTCTGCTGTTTTAATGCTTCATACTCCGGGATTAGGTCCGCATTGAATTACGGTAAAGGAAGAAGCCATGAGGGCATAATCAAGTATGGGTTCTGCCTGGTCAAAGGGAAAGCTAATCACCCCATGGAAGATTACCATGTTGCTAAGTTTGTTCAGATTCAAGAACATGAATTGGGGCTCTTTGCTATTTATGATGGCCATTTAGGAGAAAGTGTGCCTGCCTACTTACAAAAGCATTTGTTTTCTAACATCTTGAAAGAGGAAGAGTTTTGGGTTGACCCCAACAGCTCCATCTCAAAAGCATATGAAAAGACGGACCAGGCGATTCTATCCCACAGCTCTGACTTGGGTCGTGGTGGATCAACTGCTGTTACTGCTATTCTGATTAATGGTCGAAGACTATGGGTGGCCAATGTCGGTGATTCACGTGCAGTTCTTTCTAGAGGGGGCGAAGCTGTACAGATGACCATCGATCATGAGCCAAATACAGAACGTCGCACCATTGAGAATAAAGGTGGCTTCGTTTCAAACATGCCAGGAGATGTGCCACGAGTAAACGGCCAGCTAGCAGTTTCACGAGCATTTGGAGACAAGAGTCTCAAATCTCACCTGCGATCAGATCCTGACATACGTGATGTTAATGTAGACGCCAACACGGACATATTAATTCTCGCCAGCGACGGTCTTTGGAAGGTCATGGCCAATCAAGAAGCGGTCGATATTGCACGAAGAATTAAAGACCCATTGAAGGCTGCTAAGCAGTTAATAACTGAGGCTTTGGAGAAAGAGAGTAAAGATGATATATCATGCATTGTGGTTAGATTTAGGTTGGACCGGTCAAACGTTGATTTTGTGATGAGCTTGGATCGAGCATGGGCTGGACTTGGACCGACCTCTCGGCTTCAATTGATGAGGTTGAATATATGGATCATGCTGAACGATTTAGAGAGTGAAATTGTATTTGTCCCTTAA | 981 | 44.44 | MDKLCCFNASYSGIRSALNYGKGRSHEGIIKYGFCLVKGKANHPMEDYHVAKFVQIQEHELGLFAIYDGHLGESVPAYLQKHLFSNILKEEEFWVDPNSSISKAYEKTDQAILSHSSDLGRGGSTAVTAILINGRRLWVANVGDSRAVLSRGGEAVQMTIDHEPNTERRTIENKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIRDVNVDANTDILILASDGLWKVMANQEAVDIARRIKDPLKAAKQLITEALEKESKDDISCIVVRFRLDRSNVDFVMSLDRAWAGLGPTSRLQLMRLNIWIMLNDLESEIVFVP | 326 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 27341263 | 27345257 | + | ClCG11G014100.2 | Cla11g01380 | 285202 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla11g01380 | 326 | PANTHER | PROTEIN PHOSPHATASE 2C | 10 | 279 | IPR015655 | GO:0004722|GO:0006470 | |
Cla11g01380 | 326 | SMART | PP2C_SIG_2 | 42 | 278 | IPR001932 | - | |
Cla11g01380 | 326 | Gene3D | - | 26 | 286 | IPR036457 | - | |
Cla11g01380 | 326 | ProSiteProfiles | PPM-type phosphatase domain profile. | 31 | 278 | IPR001932 | - | |
Cla11g01380 | 326 | SUPERFAMILY | PP2C-like | 25 | 278 | IPR036457 | - | |
Cla11g01380 | 326 | CDD | PP2Cc | 30 | 278 | IPR001932 | - | |
Cla11g01380 | 326 | Pfam | Protein phosphatase 2C | 40 | 271 | IPR001932 | - | |
Cla11g01380 | 326 | SMART | PP2C_4 | 23 | 276 | IPR001932 | - | |
Cla11g01380 | 326 | PANTHER | PROTEIN PHOSPHATASE 2C 10-RELATED | 10 | 279 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla10g00886 | Cla-Chr10:20318599 | Cla11g01380 | Cla-Chr11:27341263 | 1.46E-160 | dispersed | |
Cla11g01380 | Cla-Chr11:27341263 | Cla11g01750 | Cla-Chr11:31111961 | 5.42E-114 | dispersed | |
Cla11g01380 | Cla-Chr11:27341263 | Cla07g00237 | Cla-Chr7:2622852 | 6.47E-115 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla11g01380 | K17506 | - | csv:101213414 | 553.132 |