Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g01382 ATGGCGAAAGAGAGAGAACTACTCGTTTACTCAGCTAGATTGGCAGAGCAAGCTGAGAGATACGAAGGTACGTACTGTTTATTTCTAGAATCTAATTTCTTAATCGGGGATTTATTTGCTAATTCACTCGATCGATTCAATGAACTTAGCGATTACTGTTCCTTTGATTGCTGGGGCATGTTGGCGCTTAACTCTAGAATTTCGATCTGGCTTATTACTGAGATGGTTGAGAAAATGGAGAAAGTTGCAAAGTTAAACGTGGAATTGACTGTGGAAGAGAGAAATCTGCTATCTGTTGGTTATAAGAATGTAATAGGAGCTAGACGAGCTTCCTGGCGTATTTTATCTTCAATTGAACAGAAGGAAACTACCAAACATAATGAGAAGAATGTGGAACGGATAATTGATTACAGGCATCGGGTTGAAGATGAGCTCTCTAAAATATGCAGTGACATATTGTCGATCATTGACCAACATCTCCTTCCATGTTCCTCAGCTGGAGAATCTACTGTATTCTACCATAAGATGAAAGGAGACTATTGTCGGTATTTGGCTGAGTTTAAATCTGGTGACGAGCGTAAACAAGTTGCAGATCAATCATTAAAGTCTTATGAGGCAAGTTTATTTCCTGCTGCATCTGCAATTGCTAACTCTGATTTGTCTCCAACTCATCCTATAAGACTTGGCTTGGCGCTGAACTTCTCTGTTTTCTACTATGAGATATTGAATTCCCCTGAAAGGGCCTGCCACCTTGCCAAGCAGGCCTTTGATGAGGCTATTGCAGAACTTGACAGTCTCAGTGAAGAATCCTACAAGGACAGTACCCTTATTATGCAACTCCTTAGGGACAACCTGACCCTGTGGACTTCTGATCTTCCAGACGAAGGTGCTCCTCTCCCAGAAAGATTGATTTGTTCCTATTCCTATCAACTTTCCGAAAAGTAG 945 41.06 MAKERELLVYSARLAEQAERYEGTYCLFLESNFLIGDLFANSLDRFNELSDYCSFDCWGMLALNSRISIWLITEMVEKMEKVAKLNVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKETTKHNEKNVERIIDYRHRVEDELSKICSDILSIIDQHLLPCSSAGESTVFYHKMKGDYCRYLAEFKSGDERKQVADQSLKSYEASLFPAASAIANSDLSPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKDSTLIMQLLRDNLTLWTSDLPDEGAPLPERLICSYSYQLSEK 314
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 27349996 27353450 - ClCG11G014120.2 Cla11g01382 285204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g01382 314 PANTHER 14-3-3 PROTEIN 73 296 IPR000308 -
Cla11g01382 314 SUPERFAMILY 14-3-3 protein 69 291 IPR036815 -
Cla11g01382 314 Pfam 14-3-3 protein 73 289 IPR023410 -
Cla11g01382 314 PRINTS 14-3-3 protein zeta signature 88 117 IPR000308 -
Cla11g01382 314 PRINTS 14-3-3 protein zeta signature 168 190 IPR000308 -
Cla11g01382 314 PRINTS 14-3-3 protein zeta signature 262 291 IPR000308 -
Cla11g01382 314 PRINTS 14-3-3 protein zeta signature 137 161 IPR000308 -
Cla11g01382 314 PRINTS 14-3-3 protein zeta signature 235 261 IPR000308 -
Cla11g01382 314 ProSitePatterns 14-3-3 proteins signature 1. 94 104 IPR023409 -
Cla11g01382 314 Coils Coil 249 269 - -
Cla11g01382 314 ProSitePatterns 14-3-3 proteins signature 2. 271 290 IPR023409 -
Cla11g01382 314 PANTHER 14-3-3-LIKE PROTEIN GF14 OMICRON 73 296 - -
Cla11g01382 314 Gene3D - 1 298 IPR036815 -
Cla11g01382 314 SMART 1433_4 73 302 IPR023410 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cla08g01110 Cla11g01382 CCT
Cla08g01110 Cla11g01382 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla07g00262 Cla-Chr7:2904787 Cla11g01382 Cla-Chr11:27349996 5.24E-128 dispersed
Cla11g01382 Cla-Chr11:27349996 Cla11g01392 Cla-Chr11:27459767 1.06E-106 dispersed
Cla05g02397 Cla-Chr5:35521249 Cla11g01382 Cla-Chr11:27349996 5.69E-125 transposed
Cla08g01043 Cla-Chr8:23114095 Cla11g01382 Cla-Chr11:27349996 5.32E-81 transposed
Cla11g01382 Cla-Chr11:27349996 Cla08g01110 Cla-Chr8:23868916 4.89E-125 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g01382 K06630 - csv:101213169 421.394