Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g01429 ATGCCGCATAGAACGACTTACTTCTTCCCCAGGCAATTTCCGGATCGCGGATTTGACTCGGCGTCAACCTCCAAACACATTTTGGATCACGAGAAGAAAATCAACAAAGACACTTTTAGTACCGAAAGCGACGCGAAACCGACCCCGAGGCCAGCGCGCGACTTTAGCGTCACGAAGAGTTCGGCTGTATCGGATCTTTTCACGGGGGACAAGGCTCAAAGCAACAAGAAACTGCCTGCTTTTTACGATTGGTTGGTGGACAAGAAAGCAACGCGATCGGCATCAGCTCACGTGAAAACTTGGCTTTCCAACTGCGACGAGGACCGCGAGCTTTTGCTTCCGCCACCTACCTCGGAGCCGGAGCATGATACATCGTCGGTTAAGGATCGGAGTGTTGACCGGAACTTTGACCGGCAAGTTTCACTGCCTAGAGTATCAAGCGAGAGTAGCTATGCGGGGAGTTTGTTTTCAGGCACGGGAACGGGGACAGTGGATGGAAACTTTTCCAGCGACGTCAAGGATTCATCGGCGTCAAAGATATTATCCTCGCACCCGGCGAAGCCGGAAGAGATTGAGGCTGTAGATGGTAAGGAAAGCATAGCACAGAGAGCGAAAGAGAGTTATTACCTGCAACTTGCTTTGGCTGCATCGCTTCGTTCCCATGCTAGTCTGGCTGGCGATCCTGTGCTCATGGAGGAATGCAGGATGGAAATTACGGACGCTGAAACTGTTTCTTATCGACTTTGGGTAAGTGGTTGCCTGTCCTACTCCGACAAAATATCAGATGGTTTCTACAATATTCTGGGTATGAACCCGTATCTCTGGGTTATGTGCAATGGTTTTGAGGAAGGTAGACGGCTACCTCCTCTGATGTCGCTTAGAACCATTGAACCAAGTGAGACGTCAATGGAGGTGATTCTTGTGGATAGACATGGGGACTCTCGACTGAAAGAGCTTGAAGACAAGGCACAGGAACTATATTGTGCTTCAGAGAGCACCTTAGTGTTGGTGGAGAAACTAGGAAAGCTTGTTGCGATCTACATGGGGGGCACTTTTCCGGTGGAGCAAGGGGGGTTGCACCTACATTGGAAAGTGGTGAGCAAAAGATTGAGGGAATTCCAGAAATGCATTGTTCTTCCAATTGGTAGTCTTTCTATGGGACTATGCAGGCACCGTGCAATCCTTTTCAAGAAATTGGCAGATTACATAGGTTTGCCATGTCGGATAGCTAGAGGTTGCAAGTACTGTGTTGCAGATCATCGATCCTCTTGCCTTGTCAAAATTGAAGATGACAAGAAATCGTTGAGGGAATATGTAGTTGATTTAGTGGGGGAACCGGGAAATATACATGGTCCAGATTCCTCAATTAATGGAGGGTTCCAATCGTCAATGCCTTCACCGCTCCACATTTCTCATTTAAAAGAGTTTCAAGAACCTTACGTGGAAAGTTATCTCAATCATCAAACTGTTGGGTCAAAGCAAATCTGTGGATTTCCTGAAAATCCTCTACGTTCAGGTTATGGAGAGTACCAGATGAAAGGGGGAAGCACTTTACATAGGAGTTCAGGGGCTGAAACTGATAAATTGGTTGATCAAGCTTGTATGGGTATGAGATCAACTCAGTTCTGTGTGGAGACAAAATTGAGCAAGGAGTGTGTGCTTCAGAGTCATATAATGCCACCCACTGGTGCTGATGCCGCCGAGGTGTTGAGTTCTGTTGGCACTGAATCTTTACGTGAAAACAAAGTTGTCATTGAAGAAATATACCAAGAAGAGGCGGTTGTGGCGGGGATTTCGCTGAATGAAACTAGCATTAATCCATCCAAATTAAGCTTGTCAACTCAAACTGCCTCAAAGGAGGTTGAGGGTAGGTCTCAAAATTGTTCAGCATCAACATATCCGAAATATCTGACGCTTGAACCTTCACTTGCAATGGATTGGCTGGAAATTTCATGGGATGAACTACATATAAAGGAGCGTGTCGGAGCTGGCTCCTTTGGTACAGTGCACCGTGCTGAATGGCATGGATCGGATGTTGCTGTCAAGGTTCTAACTGTGCAGGATTTCCATGATGATCAGTTGAAAGAGTTTCTAAGAGAGGTTGCAATAATGAAGCGGGTGCGCCATCCGAATGTGGTACTCTTTATGGGTGCAGTTACAAAGCGACCTCATCTTTCAATAGTGACTGAATATCTGCCCAGGGGTAGTCTATACCGCCTAATCCACAGGCCATCTTCTGGTGAATTGATGGATCAAAGGAAACGATTGCGCATGGCATTGGATGTGGCAAAGGGAATCAACTACCTACATTGTCTCAATCCTCCTATAGTACACTGGGATCTTAAATCCCCTAACTTGTTGGTTGACAAAAATTGGACGGTGAAGGTTTGTGATTTTGGGTTGTCCAGATTCAAAGCAAACACTTTCATATCATCGAAATCTGTTGCTGGAACGCCTGAGTGGATGGCTCCGGAATTCCTTCGTGGAGAGCCCTCAAATGAGAAGTCTGATGTCTACAGTTTTGGAGTGATCCTCTGGGAACTAGTAACCATGCAACAACCATGGAGTGGGCTCGGCCCGGCTCAGGTCGTGGGAGCTGTCGCTTTCCAGAATAGAAAGCTTTCTATCCCACCAAGTACTTCTCCATTGTTGGCTTCCCTTATTGAATCTTGCTGGGCAGATGATCCTGTTCAGCGCCCATCCTTCACAAGCATCGTCGAGTCCCTAAAGAAATTGCTGAAATCTCCACAGCAGTTGATAGCCATGGGTGGAACGCCTGTAATCTGTGTGAACCCACCGTATGTTTACTTGCCATCCCTAATGCAGGAAGAATGCTCTCTTCTCTCAAGTGTACTTGTCCCTGCCAAGCAATTTTATGATTGGCAAATCAACAACCTGGATCTGCCTCCTTTCTTTGAAAACTGGAGCAAAGTTAGGAATGCAGAATCTGCATCGATGACTTTAGCGGAAGAACTGATGAGGTCTTATGAACGTCAAGGTACGTTTAAACACTCTATACGATGA 3024 46.49 MPHRTTYFFPRQFPDRGFDSASTSKHILDHEKKINKDTFSTESDAKPTPRPARDFSVTKSSAVSDLFTGDKAQSNKKLPAFYDWLVDKKATRSASAHVKTWLSNCDEDRELLLPPPTSEPEHDTSSVKDRSVDRNFDRQVSLPRVSSESSYAGSLFSGTGTGTVDGNFSSDVKDSSASKILSSHPAKPEEIEAVDGKESIAQRAKESYYLQLALAASLRSHASLAGDPVLMEECRMEITDAETVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNGFEEGRRLPPLMSLRTIEPSETSMEVILVDRHGDSRLKELEDKAQELYCASESTLVLVEKLGKLVAIYMGGTFPVEQGGLHLHWKVVSKRLREFQKCIVLPIGSLSMGLCRHRAILFKKLADYIGLPCRIARGCKYCVADHRSSCLVKIEDDKKSLREYVVDLVGEPGNIHGPDSSINGGFQSSMPSPLHISHLKEFQEPYVESYLNHQTVGSKQICGFPENPLRSGYGEYQMKGGSTLHRSSGAETDKLVDQACMGMRSTQFCVETKLSKECVLQSHIMPPTGADAAEVLSSVGTESLRENKVVIEEIYQEEAVVAGISLNETSINPSKLSLSTQTASKEVEGRSQNCSASTYPKYLTLEPSLAMDWLEISWDELHIKERVGAGSFGTVHRAEWHGSDVAVKVLTVQDFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPSSGELMDQRKRLRMALDVAKGINYLHCLNPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWSGLGPAQVVGAVAFQNRKLSIPPSTSPLLASLIESCWADDPVQRPSFTSIVESLKKLLKSPQQLIAMGGTPVICVNPPYVYLPSLMQEECSLLSSVLVPAKQFYDWQINNLDLPPFFENWSKVRNAESASMTLAEELMRSYERQGTFKHSIR 1007
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 27854706 27863711 - ClCG11G014630.2 Cla11g01429 285251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g01429 1007 Gene3D Transferase(Phosphotransferase) domain 1 734 921 - -
Cla11g01429 1007 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 108 923 - -
Cla11g01429 1007 SMART serkin_6 655 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01429 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 776 788 IPR008271 GO:0004672|GO:0006468
Cla11g01429 1007 ProSiteProfiles Protein kinase domain profile. 655 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01429 1007 ProSitePatterns Protein kinases ATP-binding region signature. 661 682 IPR017441 GO:0005524
Cla11g01429 1007 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 108 923 - -
Cla11g01429 1007 Pfam Protein tyrosine and serine/threonine kinase 655 909 IPR001245 GO:0004672|GO:0006468
Cla11g01429 1007 Pfam Ethylene-responsive protein kinase Le-CTR1 241 449 - -
Cla11g01429 1007 SUPERFAMILY Protein kinase-like (PK-like) 629 908 IPR011009 -
Cla11g01429 1007 MobiDBLite consensus disorder prediction 109 137 - -
Cla11g01429 1007 Gene3D Phosphorylase Kinase; domain 1 648 732 - -
Cla11g01429 1007 PRINTS Tyrosine kinase catalytic domain signature 729 742 IPR001245 GO:0004672|GO:0006468
Cla11g01429 1007 PRINTS Tyrosine kinase catalytic domain signature 770 788 IPR001245 GO:0004672|GO:0006468
Cla11g01429 1007 PRINTS Tyrosine kinase catalytic domain signature 836 858 IPR001245 GO:0004672|GO:0006468
Cla11g01429 1007 PRINTS Tyrosine kinase catalytic domain signature 880 902 IPR001245 GO:0004672|GO:0006468
Cla11g01429 1007 MobiDBLite consensus disorder prediction 109 145 - -
Cla11g01429 1007 MobiDBLite consensus disorder prediction 27 57 - -
Cla11g01429 1007 CDD STKc_MAP3K-like 661 909 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla05g01828 Cla-Chr5:30182438 Cla11g01429 Cla-Chr11:27854706 6.71E-28 dispersed
Cla06g00427 Cla-Chr6:5198086 Cla11g01429 Cla-Chr11:27854706 1.07E-101 dispersed
Cla10g01842 Cla-Chr10:34356811 Cla11g01429 Cla-Chr11:27854706 5.96E-70 dispersed
Cla11g01222 Cla-Chr11:25519905 Cla11g01429 Cla-Chr11:27854706 1.02E-39 dispersed
Cla11g01429 Cla-Chr11:27854706 Cla05g01594 Cla-Chr5:27021993 2.26E-60 dispersed
Cla11g01429 Cla-Chr11:27854706 Cla04g00964 Cla-Chr4:24754951 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80954 PF07714 PK_Tyr_Ser-Thr 6.80E-64 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g01429 - - csv:101204522 1729.53