Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cla11g01450 | ATGGAGTTGAATGAAAACTATTTGTTAGAGGAAGTTTTAGGTGTGAGAAGAGAAATGAATTGGGAATTAGCAATGTCTATGGAAATGAATGAGTTAATTTGTAGTGCAAATGGGTGGAATTTCGATTGCTCTGATTCTTCAGCAATGGATCAGCACAATCTTAATTATCTTCTCGGTGGGCAAGGTCAGTACTGTTTGCCTACGGCGGCGGGGAGTACCGGCGATTCAATGTTGGAGACTCCGCCGAGTAGTTTTGAGGTTTATAATGGGGAATATCCGATTACGAGTATGGAAGAGGAGGAACTTGGAATTTTGGAGGATGAGATTCATAATCTTGAAGTTCAGGCTAATTATTGTAAAGTTGAGGCTAATGTTGAATCTCCTATCCCCATTTTCAACACGGGTGGCACGTGCGACGATTTTCCCAAACAAAAAATCGTCAATTACTCGTGTACTAAGAAGCTTCAGGGGCAGCCGTCCAAGAATCTCATGGCTGAGAGACGGCGGAGGAAGCGTCTCAACGATCGCCTCTCTATGCTCAGATCCATTGTCCCCAAAATCAGCAAGATGGATAGAACCGCGATTCTGGCAGATGCAATTGAGTACGTGAAGGAACTGATGGAGAAAATTAAGAAGTTGGAAAGGGAAATTGAGGTGAATAATAATAATAATCCGAATAAGTTGGGGATTATGAGAGATGTGAAACCAAATAATGAATATTTGGTGAGAAATTCACCCAAGTTTAATGTGGAAAGAAGAGGAGATGACACAAGGATTGAGATTTGTTGTGCAGCAAAGCCAGGGTTATTATTGTCAACAGTGCACACTCTTGAAACATTGGGGCTTGATATTCAGCAGTGTGTTATTAGCTGTTTCAATGACTTTGCAATTCAAGCTTCTTGTTCTGAGGGAAGCGAGCAGAGAACAATAGTGAGCACTGAAGAAGTAAAGCAAGCATTATTTGAAAATGCTGGCTATGGAGGAAAATGCTTGTAG | 996 | 41.37 | MELNENYLLEEVLGVRREMNWELAMSMEMNELICSANGWNFDCSDSSAMDQHNLNYLLGGQGQYCLPTAAGSTGDSMLETPPSSFEVYNGEYPITSMEEEELGILEDEIHNLEVQANYCKVEANVESPIPIFNTGGTCDDFPKQKIVNYSCTKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIEYVKELMEKIKKLEREIEVNNNNNPNKLGIMRDVKPNNEYLVRNSPKFNVERRGDDTRIEICCAAKPGLLLSTVHTLETLGLDIQQCVISCFNDFAIQASCSEGSEQRTIVSTEEVKQALFENAGYGGKCL | 331 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 28134276 | 28137195 | + | ClCG11G014830.1 | Cla11g01450 | 285272 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cla11g01450 | 331 | SMART | finulus | 163 | 212 | IPR011598 | GO:0046983 | |
Cla11g01450 | 331 | Coils | Coil | 95 | 115 | - | - | |
Cla11g01450 | 331 | CDD | ACT_UUR-ACR-like | 257 | 320 | - | - | |
Cla11g01450 | 331 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 157 | 206 | IPR011598 | GO:0046983 | |
Cla11g01450 | 331 | PANTHER | - | 77 | 331 | - | - | |
Cla11g01450 | 331 | Gene3D | - | 152 | 224 | IPR036638 | GO:0046983 | |
Cla11g01450 | 331 | PANTHER | TRANSCRIPTION FACTOR SCREAM2-RELATED | 77 | 331 | - | - | |
Cla11g01450 | 331 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 161 | 222 | IPR036638 | GO:0046983 | |
Cla11g01450 | 331 | Coils | Coil | 196 | 223 | - | - | |
Cla11g01450 | 331 | Pfam | Helix-loop-helix DNA-binding domain | 163 | 206 | IPR011598 | GO:0046983 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cla08g01184 | Cla11g01450 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cla11g01450 | Cla-Chr11:28134276 | Cla02g00417 | Cla-Chr2:4095436 | 2.61E-19 | dispersed | |
Cla01g01776 | Cla-Chr1:32712626 | Cla11g01450 | Cla-Chr11:28134276 | 8.53E-79 | wgd | |
Cla11g01450 | Cla-Chr11:28134276 | Cla08g01184 | Cla-Chr8:24732139 | 5.59E-94 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62062 | PF00010 | HLH | 5.70E-10 | No_clan | Cla | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cla11g01450 | - | - | csv:101222621 | 399.823 |