Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g01456 ATGTCGTCTCTACATTTTCTCTGCTTTTTCTCTCTAATTTCCATCGCCTTTCTCCCTGGAATCAAATCTGACGACGAACGTCAAATCCTAACCAAACTCAAATCCTCACTCCAAAATTCAAACGCCAATGTCTTCCACAACTGGGGATTTCAAAATCCCATCTGCAATTTCACCGGAATCGCTTGTAATTCAGATGGGTTTGTTAAGGAAATTGACCTATCCAAACGGGGTTTATCTGGGATTGTTCCGTTTGATTCCGTTTGCCAATTGCAAGCCTTGGAGAAGTTGGCTCTTCGGTCTAATTCCCTGCACGGTGAAATCACAGAGGGTTTGAATAATTGTGTGAAATTGAAATATTTGGATCTCAGCAGCAATTCCTTCTCTGGTTCTTTTCCCAACATACATTCTTTGAGTGAATTGGAGTATTTGTATTTGAATGTAAGTGGGATTTCAGGAAAGTTTCCATGGAAATCAGTTGGGAATTTGAGTGGTTTGATTGAGTTGAGTGTTGGGGATAACGCTTTTGAAAACACTACGTTTCCTGTGGAGGTTACTAATTTGAAGAAGCTTAATTGGCTTTACTTGTCAAACTGCAGCTTAACAGGGGAAATTCCAAGGTCTATAGGTAATCTCACGCAGCTTCTTAATTTGGAATTTTCGGATAATTATATAACAGGGACTATTCCGCCGGAGATTGCCAACCTGCAGAAGCTATGGCAGTTGGAATTCTACGGTAATCAATTAACGGGGACACTTCCAGTGGGATTAAGAAATCTAACCGGGCTTAAGAATTTTGATGCTTCTTTGAATCAAATTCATGGGGATTTATCAGAGTTGAGGTTTTTGACGAACCTGGTTTCTCTGCAAATGTTTGAAAATCAAATTTCCGGCGAAATTCCGGTGGAGTTTGGTGAATTCAAGTCACTGGTGAATCTCTCCCTTTACAAGAACAAGCTTACAGGGCCTCTTCCGCAATCGATTGGTTCTTGGACGGAGTTTGATTTTATTGATGTATCTGAAAATTTCTTGACGGGGCCGATTCCTCCTGATATGTGCAAGAAGGGGACGATGCAGAAGCTTCTCATCCTTCAGAACAATTTTACCGGTGAAATTCCGGCAACCTACGCTAACTGCTCCACTTTAACCCGATTTAGAGTCAGTCAGAACTCGCTCACCGGAGTCGTTCCGTCTGGAATTTGGGGATTACCGAACGTGAATATAATTGATCTCGCCTCGAATCAGTTGGAAGGTTCAATCACTCCCAACATTGGAAAGGCTGTGGCTCTCTCGGAATTATACATCGGAAATAATCGATTCTCAGGTCGACTGCCAACGGAGATTTCGCAAGCAAAATCTCTCGCTTCGGTTGACCTGAGCAATAATCAATTCACCGATGAACTTCCGATGACTATCGGCGACCTGAAGAATCTCGATAGCTTCGAATTGCAGGGGAATAAATTCTCCGGTTCGATTCCAGAGACGATCGGCTTGTGTAATTCCTTGAGCATCATCAATCTGGCGGATAATTTCTTCTCTGGACAAATCCCTTCGTCGCTAGGGTTTCTTCCAGTTCTAAACTCTTTGAATCTCTCCAATAACGGCCTATCGGGTGAAATCCCCTCGACGTTTTCGCATCTGAAATTGAGTTTTCTCGATCTTTCCAACAATCAATTAACCGGTCCAGTACCTCAAGCGCTCTCGAATGGAGCTTACAAAGAAAGCTTTGCCGGAAACCCTGGCCTCTGCAGTGAGGCCAATGACTTTATACGGCGATGTTCACAGAGTTCCGGCGCGTCGAAGGACGTCAAAACACTTGTCATCTGTTTCGCCGTCGGATTAATCCTTCTCAGTGTGACGCTGTGGTGCTTCATAACCTTGAAAAAGAGCAGAAAAGATCGAGATCGATCGCTTAAAGAAGAATCGTGGGACCTAAAATCGTTCCACGTAATGACGTTCACAGAGGACGAGATACTCGATTCCATTAAAGACGAGAATCTAATCGGAAAAGGAGGTTCCGGCAACGTTTACAAAGTGACTGTCGGAAACGGAAAAGAATTCGCCGTGAAGCACATTTGGAACACTAATCCGTACGAAGGAAAGAAGAAGAGTTACCGTAGTTCATCGACGATTCTGGTGAAACAGAGAACGAAGTCATCGGAATTTGAGTCGGAAGTGAAGACTCTAAGCTCGATCCGCCACGTGAACGTGGTGAAGCTGTACTGCAGCATCACGAGCGAGGTTTCAAGCCTGTTGGTGTACGAATACATGCCGAATGGAAGCTTATGGGACAGACTTCACACGTCGAGAAAAATGGAGTTGGATTGGGAAACAAGATACGAAATCGCCGTGGGAGCGGCGAAGGGACTGGAGTATCTTCATCACGGTTGTGACCGGCCGGTGATCCACCGGGATGTTAAGTCGAGTAACATACTTTTGGATGAATTTCTGAAGCCGAGAATCGCGGATTTTGGGCTTGCCAAAATTCTTCACACAACTGGGTTCAACGAGACCACCCATGTCATTGCCGGCACCCCGGGCTACATCGCACCAGAGTATGGATACACTTATAAAGTCGATGAGAAGAGCGACGTGTACAGTTTTGGAGTTGTATTGATGGAGTTAGTGAGTGGGAAAAAGGCAATAGAGGCCGAGTTTGGAGAGAACAAGGAGATTGTACAATGGGTATCAAACAATTTGAAGACAAGAGAAAGTGTATTAAGCTTAGTAGATTCAAGAATTCCAGATGTATTTAAAGAAGATGCAATAAAGGTATTAAGAATTGCAATTTTGTGCACAGCAAGACTTCCCACTTTGAGACCCACAATGAGAAGTGTCGTTCAAATGCTCGAAGAAGCTCAACCTTGTCGCTTGCTTGGAATTCTCATTACCAAAGATGGTGGGACTGTTAAAAAGGAATTACCTTTGGATGTCAATAAAATTAGTCTCTAA 2949 43.71 MSSLHFLCFFSLISIAFLPGIKSDDERQILTKLKSSLQNSNANVFHNWGFQNPICNFTGIACNSDGFVKEIDLSKRGLSGIVPFDSVCQLQALEKLALRSNSLHGEITEGLNNCVKLKYLDLSSNSFSGSFPNIHSLSELEYLYLNVSGISGKFPWKSVGNLSGLIELSVGDNAFENTTFPVEVTNLKKLNWLYLSNCSLTGEIPRSIGNLTQLLNLEFSDNYITGTIPPEIANLQKLWQLEFYGNQLTGTLPVGLRNLTGLKNFDASLNQIHGDLSELRFLTNLVSLQMFENQISGEIPVEFGEFKSLVNLSLYKNKLTGPLPQSIGSWTEFDFIDVSENFLTGPIPPDMCKKGTMQKLLILQNNFTGEIPATYANCSTLTRFRVSQNSLTGVVPSGIWGLPNVNIIDLASNQLEGSITPNIGKAVALSELYIGNNRFSGRLPTEISQAKSLASVDLSNNQFTDELPMTIGDLKNLDSFELQGNKFSGSIPETIGLCNSLSIINLADNFFSGQIPSSLGFLPVLNSLNLSNNGLSGEIPSTFSHLKLSFLDLSNNQLTGPVPQALSNGAYKESFAGNPGLCSEANDFIRRCSQSSGASKDVKTLVICFAVGLILLSVTLWCFITLKKSRKDRDRSLKEESWDLKSFHVMTFTEDEILDSIKDENLIGKGGSGNVYKVTVGNGKEFAVKHIWNTNPYEGKKKSYRSSSTILVKQRTKSSEFESEVKTLSSIRHVNVVKLYCSITSEVSSLLVYEYMPNGSLWDRLHTSRKMELDWETRYEIAVGAAKGLEYLHHGCDRPVIHRDVKSSNILLDEFLKPRIADFGLAKILHTTGFNETTHVIAGTPGYIAPEYGYTYKVDEKSDVYSFGVVLMELVSGKKAIEAEFGENKEIVQWVSNNLKTRESVLSLVDSRIPDVFKEDAIKVLRIAILCTARLPTLRPTMRSVVQMLEEAQPCRLLGILITKDGGTVKKELPLDVNKISL 982
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28223851 28227963 + ClCG11G014890.1 Cla11g01456 285278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g01456 982 PANTHER RECEPTOR-LIKE PROTEIN KINASE 7 7 963 - -
Cla11g01456 982 Gene3D Phosphorylase Kinase; domain 1 632 755 - -
Cla11g01456 982 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 7 963 - -
Cla11g01456 982 SUPERFAMILY L domain-like 24 349 - -
Cla11g01456 982 ProSiteProfiles Leucine-rich repeat profile. 116 138 IPR001611 GO:0005515
Cla11g01456 982 SMART serkin_6 661 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01456 982 Gene3D Ribonuclease Inhibitor 24 135 IPR032675 -
Cla11g01456 982 Pfam Protein kinase domain 663 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01456 982 Pfam Leucine Rich Repeat 116 133 IPR001611 GO:0005515
Cla11g01456 982 Pfam Leucine Rich Repeat 525 546 IPR001611 GO:0005515
Cla11g01456 982 Pfam Leucine Rich Repeat 186 211 IPR001611 GO:0005515
Cla11g01456 982 ProSiteProfiles Protein kinase domain profile. 661 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01456 982 Gene3D Ribonuclease Inhibitor 353 600 IPR032675 -
Cla11g01456 982 SUPERFAMILY Protein kinase-like (PK-like) 651 950 IPR011009 -
Cla11g01456 982 Gene3D Transferase(Phosphotransferase) domain 1 756 956 - -
Cla11g01456 982 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Cla11g01456 982 SUPERFAMILY RNI-like 317 568 - -
Cla11g01456 982 ProSitePatterns Protein kinases ATP-binding region signature. 667 689 IPR017441 GO:0005524
Cla11g01456 982 ProSitePatterns Serine/Threonine protein kinases active-site signature. 800 812 IPR008271 GO:0004672|GO:0006468
Cla11g01456 982 Gene3D Ribonuclease Inhibitor 136 352 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla09g01077 Cla-Chr9:11408353 Cla11g01456 Cla-Chr11:28223851 1.11E-23 dispersed
Cla10g00774 Cla-Chr10:14594346 Cla11g01456 Cla-Chr11:28223851 0 dispersed
Cla11g01456 Cla-Chr11:28223851 Cla11g01457 Cla-Chr11:28242619 0 tandem
Cla02g00724 Cla-Chr2:8746058 Cla11g01456 Cla-Chr11:28223851 0 transposed
Cla08g00874 Cla-Chr8:21166480 Cla11g01456 Cla-Chr11:28223851 0 transposed
Cla09g01208 Cla-Chr9:15045486 Cla11g01456 Cla-Chr11:28223851 7.00E-44 transposed
Cla06g01712 Cla-Chr6:30677277 Cla11g01456 Cla-Chr11:28223851 8.41E-06 transposed
Cla11g01456 Cla-Chr11:28223851 Cla08g01193 Cla-Chr8:24848146 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80955 PF00069 Pkinase 2.80E-43 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g01456 - - csv:101223100 1654.8