Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cla11g01457 ATGCCTCTTCCTTTCTACTTCTTCTTTCTTCTATCTTTCCTTTCTCTTGCCATTGGAACTGACCAGTTTCAATTTTTCTCTTTCATGCAAAAGGGTGTCATCGGGAATTCTCTCCCCTCCGATTGGACTGGAAATTCCTTCTGTAATTTCACCGGAGTTAGCTGTAACCAAAAGGGGTTAGTGGTCGGAATTGATCTCTCTGGCAGGGCGGTTTCCGGGAGGTTTCCGGCAGATGTTTGTTCTTATTTGCCGGAGTTGAGAGTGCTGCGGCTTGGACGGAGTGGCTTTCGTGGAACCTTTCCACGTGGGATAACCAATTGCTCTGTTTTGGAAGAATTGGATATGAGTTTTCTGTCACTGACGGGGACGTTACCGGATTTCTCGCCGTTGAAAACCTTGAGGATTCTCGACATGTCGTACAATAATTTCACCGGTGAATTCCCCTTGTCGGTTTTCAGTTTAACCAATCTCGAGAAGTTGAATTTCAACGAGGACAACAATTTCAATACGTGGCAGTTGCCGGAGAGTGTGTCCGGCTTGACGAAGTTGAAATCCATGGTGTTAACGACTTGTATGCTGGAGGGTCGAATTCCGGCGACGATTGGGAATATGACGGCGCTCGTTGACCTTGAATTAAGCGGCAATTTCCTCACCGGAAAAATCCCAAGAGAAATCGGGAATTTGAAGAATTTGAGACAGTTGGAGCTTTATTACAATTCATTAGTCGGAGAAATTCCAGAGGAACTTGGGAATTTAACAGAGCTCGTGGACTTGGACATGTCAGTCAACAAGTTGACTGGGAAACTTCCAGAGTCGATTTGTCGTCTTCCTAAGCTTGAAGTTCTTCAATTTTACAACAACTCATTAACAGGGGAGATTCCAATTTCAATTTCAAATTCAACGACACTCACTATGTTATCCCTTTACGACAACTACATGACGGGACAAGTTCCAAGTAATTTGGGTCAATTCTCTCCCATGGTGGTTCTCGACTTGTCGGAAAATTATTTCTCCGGTCCTTTACCGACAGATGTCTGTGGAGAAGGTAAATTAATGTATTTCCTTGTGTTGGAAAATAAATTTTCCGGTCAAATCCCACCGTCGTACGGTAAATGCCAATCCCTTTTACGGTTTCGAGTCAGTTCGAATATTTTGGAAGGTCCGGTGCCGGTGGGACTTTTGAGTCTTCCTCATGTTTCGATTATTGATTTCGGTAACAATAATTTGAGTGGCGAAATTCCCAATTCTTTTGTTAAAGCGAGGAATCTTTCGGAATTGTTTATGCAGAGTAATAGAATTTCCGGCGTGTTGCCGCCGGAAATTTCTAAAGCTACCAATTTAGTTAAGATTGATCTTAGCAACAATCTCTTGTCTGGTCCAATTCCTTCCGAAATTGGGAATCTCAGAAAGCTTAATTTGTTGCTTTTGCAAGGAAATCACTTGAATTCTTCAATACCCACCTCGCTTTCTGAGCTTAAATCTCTTAATGTTCTTGATTTATCCGATAATCGATTAACGGGTAACATCCCAGAAAGTCTCTGTGAATTGCTACCGAATTCAATCAATTTCTCAAACAATCAACTCTCTGGTCCAATTCCTCTGTCTTTAATCAAAGGTGGATTAGTGGAAAGCTTTTCCGGAAACCCTGGACTTTGCGTTTCGGTTTATTTAGATTCATCAGATCAGAAATTCCCAATTTGTTCTCAAAATTACAACAAAAATCGATTGGATTCCATCTGGGCAATCGGAATATCGGCGTTCATAATCTTCATCGGAGCTGCTCTGTATTTAAGACGACGATTCAGCAGAGAAAAATCGATAATGGAACAAGACGAAACACTATCTTCATCGTTCTTCTCATACGATGTGAAAAGTTTCCATCGAATCAGCTTCGACCCAAGAGAGATAATCGAATCGATGGTGGATAAGAACATCGTCGGCCATGGCGGCTCCGGTACGGTGTACAAAATAGAGTTAAGCAGTGGGGAAATCGTAGCCGTTAAAAGGCTGTGGAGTCGAAAGGGGAAAGATACGACGTCGGATCAAGAACAGTTGTATTTGGACAAAGAACTGAAAACAGAGGTGGAAACATTAGGGAGTATAAGGCATAAAAACATAGTGAAATTGTATTGCTATTTCTCAAGCTTGGATTGCAGTTTATTGGTTTATGAGTATATGCCAAATGGGAATTTATGGGATGCTTTGCATAAGGGTTGGATTCATTTGGATTGGCCAACTAGACATCAAATTGCTTTGGGTATAGCCCAAGGCTTGGCTTACCTTCATCATGATTTGTTGCCTTCTATAATCCATAGAGACATTAAAACCACTAATATTCTCTTAGATGTCAATTATCATCCCAAAGTTGCCGATTTTGGTATTGCTAAGGTTTTGCAAGCTAGAACGGGCAAGGATTCTACCACCACCGTCATCGCCGGTACTTACGGCTATCTCGCTCCAGAGTATGCATATTCGTCAAAAGCTACAACAAAGTGCGACGTGTACAGCTTTGGAATCGTGTTGATGGAGCTAATAACAGGAAAGAAACCGGTGGAGGCAGAATTTGGGGAGAACAAGAACATCATATATTGGGTTTCAAACAAAGTAGACACAAAGGAAGGAGCAATGGAAGTATTAGACAAAAGAGTTTCAGGGTCATTCAAAGATGAGATGATTGAAGTTCTAAGGATTGCAATTCGTTGTACGTACAAGAATCCAGCCCTTAGACCCACCATGAAGGAAGTGGTTCAACTATTGATTGAAGCTGACCCTTGCAAATTCGATTCTCACAACAAATGCCCCAAACACACCACCACCAAAATCAACAACCCATTTGACCTATGA 2844 41.81 MPLPFYFFFLLSFLSLAIGTDQFQFFSFMQKGVIGNSLPSDWTGNSFCNFTGVSCNQKGLVVGIDLSGRAVSGRFPADVCSYLPELRVLRLGRSGFRGTFPRGITNCSVLEELDMSFLSLTGTLPDFSPLKTLRILDMSYNNFTGEFPLSVFSLTNLEKLNFNEDNNFNTWQLPESVSGLTKLKSMVLTTCMLEGRIPATIGNMTALVDLELSGNFLTGKIPREIGNLKNLRQLELYYNSLVGEIPEELGNLTELVDLDMSVNKLTGKLPESICRLPKLEVLQFYNNSLTGEIPISISNSTTLTMLSLYDNYMTGQVPSNLGQFSPMVVLDLSENYFSGPLPTDVCGEGKLMYFLVLENKFSGQIPPSYGKCQSLLRFRVSSNILEGPVPVGLLSLPHVSIIDFGNNNLSGEIPNSFVKARNLSELFMQSNRISGVLPPEISKATNLVKIDLSNNLLSGPIPSEIGNLRKLNLLLLQGNHLNSSIPTSLSELKSLNVLDLSDNRLTGNIPESLCELLPNSINFSNNQLSGPIPLSLIKGGLVESFSGNPGLCVSVYLDSSDQKFPICSQNYNKNRLDSIWAIGISAFIIFIGAALYLRRRFSREKSIMEQDETLSSSFFSYDVKSFHRISFDPREIIESMVDKNIVGHGGSGTVYKIELSSGEIVAVKRLWSRKGKDTTSDQEQLYLDKELKTEVETLGSIRHKNIVKLYCYFSSLDCSLLVYEYMPNGNLWDALHKGWIHLDWPTRHQIALGIAQGLAYLHHDLLPSIIHRDIKTTNILLDVNYHPKVADFGIAKVLQARTGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGIVLMELITGKKPVEAEFGENKNIIYWVSNKVDTKEGAMEVLDKRVSGSFKDEMIEVLRIAIRCTYKNPALRPTMKEVVQLLIEADPCKFDSHNKCPKHTTTKINNPFDL 947
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 28242619 28246220 + ClCG11G014900.1 Cla11g01457 285279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cla11g01457 947 Gene3D Phosphorylase Kinase; domain 1 623 725 - -
Cla11g01457 947 Pfam Protein kinase domain 642 917 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01457 947 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 937 - -
Cla11g01457 947 ProSitePatterns Serine/Threonine protein kinases active-site signature. 769 781 IPR008271 GO:0004672|GO:0006468
Cla11g01457 947 ProSiteProfiles Leucine-rich repeat profile. 494 516 IPR001611 GO:0005515
Cla11g01457 947 SUPERFAMILY L domain-like 245 562 - -
Cla11g01457 947 SUPERFAMILY RNI-like 64 341 - -
Cla11g01457 947 ProSiteProfiles Protein kinase domain profile. 640 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01457 947 Gene3D Transferase(Phosphotransferase) domain 1 726 938 - -
Cla11g01457 947 Gene3D Ribonuclease Inhibitor 24 297 IPR032675 -
Cla11g01457 947 ProSitePatterns Protein kinases ATP-binding region signature. 646 668 IPR017441 GO:0005524
Cla11g01457 947 Gene3D Ribonuclease Inhibitor 298 561 IPR032675 -
Cla11g01457 947 SMART serkin_6 640 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cla11g01457 947 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 6 937 - -
Cla11g01457 947 SMART LRR_typ_2 276 300 IPR003591 -
Cla11g01457 947 SMART LRR_typ_2 228 252 IPR003591 -
Cla11g01457 947 SMART LRR_typ_2 130 154 IPR003591 -
Cla11g01457 947 SMART LRR_typ_2 492 516 IPR003591 -
Cla11g01457 947 SUPERFAMILY Protein kinase-like (PK-like) 627 919 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cla08g01193 Cla-Chr8:24848146 Cla11g01457 Cla-Chr11:28242619 0 dispersed
Cla11g01457 Cla-Chr11:28242619 Cla02g00229 Cla-Chr2:2383335 0 dispersed
Cla11g01456 Cla-Chr11:28223851 Cla11g01457 Cla-Chr11:28242619 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
80956 PF00069 Pkinase 1.40E-48 CL0016 Cla PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cla11g01457 - - csv:101222864 1760.73